ID: uc010aop.2_intron_0_0_chr14_56044098_r.5p
GENE: (1)
chr14:56046454-56046703-


(1)
AGO2.ip 		(1)
B-CELL 		(1)
BRAIN 		(4)
BREAST 		(11)
CELL-LINE 		(3)
CERVIX 		(2)
HEART 		(1)
HELA 		(10)
LIVER 		(1)
OTHER 		(1)
RRP40.ip 		(11)
SKIN

Sense strand
CTCAGCGGAATCCCCTGCGTTCAGTAGCCCCGCTCTCCCCTGTCCCGAAGGTTGGTCTCGTCTCGCGCGGCCCTCCCTCCAGGGCACCACCTGGCTCCCCACGCCTTTTAACTTCAGCAAACGGCACTAGATTTACCCCCTGACTATCCCAGATTTCCCCCAGAAATTACTGGAAAACGACATCCCCCGTCCCTTTCTCCAGGGGATCTCTCTGAAATCTCCTTCGGGCAACGCTAGCTACAAACGGAGA
...................................................(((((.((((...((...(((((......))))).......(((.......)))...........))..)))).)))))........................................................................................................................
..................................................51..................................................................................135.................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM339996(GSM339996)
hues6Neuron. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		GSM532876(GSM532876)
G547T. (cervix)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		GSM532874(GSM532874)
G699T. (cervix)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR029126(GSM416755)
143B. (cell line)		TAX577738(Rovira)
total RNA. (breast)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR189784SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		GSM532880(GSM532880)
G659T. (cervix)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)		GSM339994(GSM339994)
hues6. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR191413(GSM715523)
28genomic small RNA (size selected RNA from t. (breast)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
......................................................GTCTCGTCTCGCGCGCGTC.................................................................................................................................................................................19125.005.008.001.00-4.002.00-3.00--1.001.001.00---2.00----1.00-----------1.00-------------
......................................................GTCTCGTCTCGCGCGCGT..................................................................................................................................................................................1818.005.002.00---1.00---1.001.001.00--------------1.001.00-------------------
....................................................................................................................GCAAACGGCACTAGATTTA...................................................................................................................1917.007.00--7.00-------------------------------------------
......................................................GTCTCGTCTCGCGCGCG...................................................................................................................................................................................1716.005.00-2.00-----1.00-------------1.00-------1.00----1.00-----------
......................................................GTCTCGTCTCGCGCG.....................................................................................................................................................................................1515.005.00-5.00--------------------------------------------
......................................................GTCTCGTCTCGCGCGC....................................................................................................................................................................................1614.005.00-4.00--------------------------------------------
......................................................GTCTCGTCTCGCGCGCGTG.................................................................................................................................................................................1912.005.002.00---------------------------------------------
........................................................................................................................................................................................................................ATCTCCTTCGGGCAACGCTAGC............2212.002.00--------------2.00-------------------------------
......................................................GTCTCGTCTCGCGCGCTTC.................................................................................................................................................................................1912.005.001.001.00--------------------------------------------
..................................CTCCCCTGTCCCGAAGGTTGG...................................................................................................................................................................................................2111.001.00-----1.00----------------------------------------
.....................................................GGTCTCGTCTCGCGCGCGT..................................................................................................................................................................................191.000.00--------1.00-------------------------------------
......................................................GTCTCGTCTCGCGCGCATC.................................................................................................................................................................................1911.005.00---1.00------------------------------------------
................................................................................................................TTCAGCAAACGGCACTAGAT......................................................................................................................2011.001.00----------------------1.00-----------------------
................................................................................................................................AGATTTACCCCCTGACTATCC.....................................................................................................2111.001.00----------------------------1.00-----------------
......................................................GTCTCGTCTCGCGCGTTT..................................................................................................................................................................................1811.005.00-----------1.00----------------------------------
................................................................................AGGGCACCACCTGGCTCCCC......................................................................................................................................................2011.001.00------------------------------1.00---------------
......................................................GTCTCGTCTCGCGCGCATA.................................................................................................................................................................................1911.005.001.00---------------------------------------------
................................................................................................................................................................CAGAAATTACTGGAAAACGACATCCCCCG.............................................................2911.001.00---------------------------------1.00------------
..............................................................................................................................................................................................CCCTTTCTCCAGGGGATCTCTCTGAA..................................2611.001.00-------------------------------------1.00--------
...............TGCGTTCAGTAGCCCCGC.........................................................................................................................................................................................................................1811.001.00------------------1.00---------------------------
...........................................................................................................TTAACTTCAGCAAACGGC.............................................................................................................................1811.001.00-----------------------1.00----------------------
...............................................................................................................................................................CCAGAAATTACTGGAAAAC........................................................................1911.001.00------------1.00---------------------------------
.......................................................TCTCGTCTCGCGCGGG...................................................................................................................................................................................161.000.00---------------------------1.00------------------
.........................................................................TCCCTCCAGGGCACCCA................................................................................................................................................................171.000.00-------------------------------1.00--------------

Antisense strand
CTCAGCGGAATCCCCTGCGTTCAGTAGCCCCGCTCTCCCCTGTCCCGAAGGTTGGTCTCGTCTCGCGCGGCCCTCCCTCCAGGGCACCACCTGGCTCCCCACGCCTTTTAACTTCAGCAAACGGCACTAGATTTACCCCCTGACTATCCCAGATTTCCCCCAGAAATTACTGGAAAACGACATCCCCCGTCCCTTTCTCCAGGGGATCTCTCTGAAATCTCCTTCGGGCAACGCTAGCTACAAACGGAGA
...................................................(((((.((((...((...(((((......))))).......(((.......)))...........))..)))).)))))........................................................................................................................
..................................................51..................................................................................135.................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM339996(GSM339996)
hues6Neuron. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		GSM532876(GSM532876)
G547T. (cervix)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		GSM532874(GSM532874)
G699T. (cervix)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR029126(GSM416755)
143B. (cell line)		TAX577738(Rovira)
total RNA. (breast)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR189784SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		GSM532880(GSM532880)
G659T. (cervix)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)		GSM339994(GSM339994)
hues6. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR191413(GSM715523)
28genomic small RNA (size selected RNA from t. (breast)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
...........................................................................................................................................CTGACTATCCCAGATCGG............................................................................................. 181.000.00----------------1.00-----------------------------
......................................................................................................................................TGGGATAGTCAGGGGGT................................................................................................... 1711.001.00----------------1.00-----------------------------
...............................TCGGGACAGGGGAGAGC.......................................................................................................................................................................................................... 1711.001.00------------------------1.00---------------------
......................................................................................................................................GGGATAGTCAGGGGGT.................................................................................................... 1611.001.00-----------------1.00----------------------------
....................................................................................................................................TCTGGGATAGTCAGGGGGTAA................................................................................................. 2111.001.00-----1.00----------------------------------------
......................................................................................................................................TCTGGGATAGTCAGGGGGT................................................................................................. 1911.001.00-----1.00----------------------------------------
..........................GCCCCGCTCTCCCCTGGA.............................................................................................................................................................................................................. 181.000.00--------------------------------------1.00-------
....................................................................................................................................................................................................................................GTTTGTAGCTAGCGTTG..... 1711.001.00---------------------------------------1.00------
............................................................................................................................................................................GAAAACGACATCCCCTTCT........................................................... 191.000.00-------------1.00--------------------------------
.........................................................................................................................................CCCTGACTATCCCAGATC............................................................................................... 181.000.00-----------------------------------1.00----------
.................................TCTCCCCTGTCCCGAAGGCA..................................................................................................................................................................................................... 201.000.00-------1.00--------------------------------------
...........................CCCCGCTCTCCCCTGGCTG............................................................................................................................................................................................................ 191.000.00-------------------1.00--------------------------
..........................GCCCCGCTCTCCCCTGGGA............................................................................................................................................................................................................. 191.000.00------------------------------------1.00---------
....................................................................................................................................................................................CATCCCCCGTCCCTTGC..................................................... 171.000.00-----------------0.25----------------------0.500.25----
............................................................................................................................................................................GAAAACGACATCCCCTGG............................................................ 181.000.00-------------1.00--------------------------------
...............................................................................................................................................................................................................................GTAGCTAGCGTTGCCCGA......... 1811.001.00------------1.00---------------------------------
....................................................................................................................................................................................CATCCCCCGTCCCTTGAC.................................................... 180.500.000.25--0.25------------------------------------------
....................................................................................................................................................................................AAGGGACGGGGGATG....................................................... 1540.250.25------------------------------------------0.25---
....................................................................................................................................................................................CATCCCCCGTCCCTTGCC.................................................... 180.250.00-------------------------------------------0.25--
....................................................................................................................................................................................CATCCCCCGTCCCTTGAG.................................................... 180.250.00--------------------------------------------0.25-
....................................................................................................................................................................................CATCCCCCGTCCCTTGCCT................................................... 190.250.00---------------------------------------------0.25