ID: uc010ame.1_intron_18_0_chr14_31185184_f.3p
GENE: (19)
chr14:31188331-31188580+


(3)
B-CELL
(1)
BREAST
(8)
CELL-LINE
(1)
FIBROBLAST
(2)
HEART
(1)
LIVER
(1)
OTHER
(5)
SKIN

Sense strand
GACCATTATTAGGATTGAGTAATTTCATCTAAAGCACTTAGAATAAAGGTTAGCACATAGTAAGTGCTCATTAAGTATTAGGGATGGTTGTTATACATTCTACAAAATTGATAGATTCATTAAAATAGGATACTCTAAGCCAAACTGACCTTCTGAAGAGAAATTCCACAGTCATGGTAAAGTTCTATTTTTTTTAATAGGAAACTGATGACTATAGATATTTTGATCCCAAAATGCTGCGGGGCAATGA
....................................................................................(((((.......((((((......(((.....)))......))))))......))))).....(((..(((..((....))...)))....)))....(((((((......)))))))................................................
....................................................................................85.......................................................................................................................206..........................................
SizePerfect hitTotal NormPerfect NormSRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR189784SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR037932(GSM510470)
293cand4_rep1. (cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR343335SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
TAX577746(Rovira)
total RNA. (breast)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR189787SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR189785SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
......................................................................................................................................................................................TTCTATTTTTTTTAATACAG................................................2042.000.0020.0018.003.00-1.00---------------------
.......................................................................................................................................................................................TCTATTTTTTTTAATACAG................................................1922.000.0010.008.001.003.00----------------------
......................................................................................................................................................................................TTCTATTTTTTTTAATACAT................................................203.000.001.002.00------------------------
.................................................................................................................................................................................................................................ATCCCAAAATGCTGCAATG......192.000.00------------2.00-------------
.........................................................................................................................................................................................................AAACTGATGACTATAGATATTTTGA........................2512.002.00-------2.00------------------
.............................................................................................................................................................................................................TGATGACTATAGATATTTTGATCCCAAAATGC.............3211.001.00----------------------1.00---
................................................................................................................................GATACTCTAAGCCAAACTGACCTTCT................................................................................................2611.001.00----------1.00---------------
.........................................................................................GTTATACATTCTACAGTTC..............................................................................................................................................191.000.00--------------------1.00-----
....................AATTTCATCTAAAGCTAA....................................................................................................................................................................................................................181.000.00-----------------------1.00--
.........................................................................................................................................................................................................AAACTGATGACTATAGATATTTTGATCCCA...................3011.001.00--------------1.00-----------
.................................................................................................................................................................................................................................ATCCCAAAATGCTGCAAT.......181.000.00------1.00-------------------
.............................................................................................................................TAGGATACTCTAAGCCAAACGACC.....................................................................................................241.000.00---------1.00----------------
.............................................................................................................................................................................ATGGTAAAGTTCTATTTTT..........................................................1921.001.00------------------------0.500.50
.............................................................................................................................................................................................................TGATGACTATAGATATTTTGATCC.....................2411.001.00--------1.00-----------------
.........................................................................................................................................................................................................AAACTGATGACTATAGATATTTTGATC......................2711.001.00-----1.00--------------------
.............................................................................................................................................................................................................TGATGACTATAGATAACC...........................181.000.00----------------1.00---------
....................................................................................................................................................................................................................TATAGATATTTTGATCCCAAAA................2211.001.00-----------1.00--------------
..........................................................................................................................................................................................................AACTGATGACTATAGATATTTTGATCCC....................2811.001.00-----1.00--------------------
..........................................................................................................................................................................................................AACTGATGACTATAGATATTTTGATCC.....................2711.001.00--------1.00-----------------
..........................................................AGTAAGTGCTCATTAAGTATTAGGGATGACTG................................................................................................................................................................321.000.00---------1.00----------------
.........................................................................................GTTATACATTCTACACC................................................................................................................................................171.000.00------1.00-------------------
................................................................................................................................GATACTCTAAGCCAAACTGACCTTCTGAAGA...........................................................................................3111.001.00----------1.00---------------
...........................................................................................................................................................................................................ACTGATGACTATAGATATTTTGA........................2311.001.00-----------1.00--------------
......................................................................................................................................................................................TTCTATTTTTTTTAATACG.................................................191.000.00----1.00---------------------
................................................................................................................................GATACTCTAAGCCAAACTGACCTTCTGAAGAGA.........................................................................................3311.001.00---------------1.00----------

Antisense strand
GACCATTATTAGGATTGAGTAATTTCATCTAAAGCACTTAGAATAAAGGTTAGCACATAGTAAGTGCTCATTAAGTATTAGGGATGGTTGTTATACATTCTACAAAATTGATAGATTCATTAAAATAGGATACTCTAAGCCAAACTGACCTTCTGAAGAGAAATTCCACAGTCATGGTAAAGTTCTATTTTTTTTAATAGGAAACTGATGACTATAGATATTTTGATCCCAAAATGCTGCGGGGCAATGA
....................................................................................(((((.......((((((......(((.....)))......))))))......))))).....(((..(((..((....))...)))....)))....(((((((......)))))))................................................
....................................................................................85.......................................................................................................................206..........................................
SizePerfect hitTotal NormPerfect NormSRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR189784SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR037932(GSM510470)
293cand4_rep1. (cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR343335SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
TAX577746(Rovira)
total RNA. (breast)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR189787SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR189785SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
...............................................................................................................................................................GAAATTCCACAGTCACTG......................................................................... 181.000.00-------------------1.00------
.........................................................................................................................................................................AGTCATGGTAAAGTTTTG............................................................... 181.000.00---------------------1.00----
................................................................................................................................................................AAATTCCACAGTCATTTG........................................................................ 181.000.00-----------------1.00--------
.....................................................................................................................................................................................................................................CAAAATGCTGCGGGGCAATGAT 221.000.00------------------1.00-------
...............................................................................................................................................................................GGTAAAGTTCTATTTGCT......................................................... 181.000.00----1.00---------------------