ID: uc010agw.1_intron_3_0_chr13_114128570_r.5p
GENE: DCUN1D2(1)
chr13:114144782-114145031-


(1)
AGO1.ip 		(4)
AGO2.ip 		(10)
B-CELL 		(2)
BRAIN 		(14)
BREAST 		(44)
CELL-LINE 		(3)
CERVIX 		(1)
FIBROBLAST 		(2)
HEART 		(4)
HELA 		(7)
LIVER 		(1)
OTHER 		(18)
SKIN 		(1)
TESTES 		(2)
UTERUS 		(1)
XRN.ip

Sense strand
CCTGCGCAGAAGGCCGGGGCCGGCCAGAAGCGGGCGGCGCGGGGGAGATGGTAGGTGGCCCGGCGTCGCCTCTGCCCGTCGGGGTCGGGGTCGGGGTCGGGCCCCAAGGTCGGCGCAGGCGGCGCGCTGGATGTGGGAGGCCGAGCCCAGCGAGCTGCGCGGGGCGTTCCGCGTGGATCCGAGGGAGGAACGCGCCGCGGGCCCGCGAGCCGGAGCGGTGGCGTCGGAGGCGCGGGACCGCGGGGAGCGC
.........................................................(((((((.(((((((.((((....)))).)))).))).)))))))....................................................................................................................................................
..................................................51.................................................102..................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR189782SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR029125(GSM416754)
U2OS. (cell line)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR029124(GSM416753)
HeLa. (hela)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR189783SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		SRR189784GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR191478(GSM715588)
30genomic small RNA (size selected RNA from t. (breast)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR191587(GSM715697)
50genomic small RNA (size selected RNA from t. (breast)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR040037(GSM532922)
G243T. (cervix)		SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)		SRR191516(GSM715626)
66genomic small RNA (size selected RNA from t. (breast)		SRR029129(GSM416758)
SW480. (cell line)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		GSM339995(GSM339995)
hues6NP. (cell line)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191405(GSM715515)
55genomic small RNA (size selected RNA from t. (breast)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		GSM416733(GSM416733)
HEK293. (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR029128(GSM416757)
H520. (cell line)		SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)		SRR037931(GSM510469)
293GFP. (cell line)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577741(Rovira)
total RNA. (breast)		SRR191620(GSM715730)
167genomic small RNA (size selected RNA from . (breast)		GSM339994(GSM339994)
hues6. (cell line)		SRR191416(GSM715526)
34genomic small RNA (size selected RNA from t. (breast)		TAX577590(Rovira)
total RNA. (breast)		SRR038859(GSM458542)
MM386. (cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR553576(SRX182782)
source: Testis. (testes)		TAX577579(Rovira)
total RNA. (breast)		SRR038860(GSM458543)
MM426. (cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038857(GSM458540)
D20. (cell line)		SRR189786SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191585(GSM715695)
196genomic small RNA (size selected RNA from . (breast)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR029131(GSM416760)
MCF7. (cell line)		SRR040020(GSM532905)
G699N_2. (cervix)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR040027(GSM532912)
G220T. (cervix)		TAX577580(Rovira)
total RNA. (breast)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
.......................................................TGGCCCGGCGTCGCCTCTGCC..............................................................................................................................................................................21125.0025.001.005.00--6.00----1.00-----1.00---1.00--1.00-1.001.00--1.00--2.00---------------------------------1.00---------------------1.00------------1.00-1.00----------
.......................................................TGGCCCGGCGTCGCCTCTGC...............................................................................................................................................................................20120.0020.005.006.00---1.00--1.001.00-2.00-------1.00---1.00------------1.00------------1.00---------------------------------------------------------------
....................................................AGGTGGCCCGGCGTCGCCTCTGC...............................................................................................................................................................................23110.0010.00---------------2.00---1.00---------1.00-------1.001.00--------------1.00-------------1.00----------------------------1.00------1.00---------
......................................................GTGGCCCGGCGTCGCCTCTGC...............................................................................................................................................................................2118.008.001.00-----2.00--1.00-2.00--------------1.00---------------1.00----------------------------------------------------------------------
....................................................AGGTGGCCCGGCGTCGCCTCT.................................................................................................................................................................................2118.008.00-------------4.00-------------------2.00------------------------1.00---------------------------------1.00--------------------
....................................GCGCGGGGGAGATGGTAGGTG.................................................................................................................................................................................................2117.007.00---6.00-----------------------------------1.00-------------------------------------------------------------------------
......................................................GTGGCCCGGCGTCGCCTCTGCCA.............................................................................................................................................................................2315.001.00----------5.00------------------------------------------------------------------------------------------------------
............................AGCGGGCGGCGCGGGGTCT...........................................................................................................................................................................................................195.000.00--5.00--------------------------------------------------------------------------------------------------------------
.......................................................TGGCCCGGCGTCGCCTCTGA...............................................................................................................................................................................2015.002.004.00----1.00-----------------------------------------------------------------------------------------------------------
....................................................................................TCGGGGTCGGGGTCGGGCC...................................................................................................................................................1914.004.00----------------2.00---------------------------------------------------------------------1.00-------1.00------------------
....................................................AGGTGGCCCGGCGTCGCCTCTGCT..............................................................................................................................................................................2413.0010.00---------------------2.00-----------------------------------1.00-------------------------------------------------------
....................................................AGGTGGCCCGGCGTCGCCTCTGCC..............................................................................................................................................................................2413.003.00-----------------------------------------1.00----------------------------1.00---------------------------1.00--------------
......................................................GTGGCCCGGCGTCGCCTC..................................................................................................................................................................................1813.003.00-------2.00--------------------------------------1.00------------------------------------------------------------------
.......................................................TGGCCCGGCGTCGCCTCTGCCC.............................................................................................................................................................................2213.003.002.00--------------------1.00-------------------------------------------------------------------------------------------
..........AGGCCGGGGCCGGCCAGAA.............................................................................................................................................................................................................................1913.003.00------------------------------------------------------------------1.00-----1.00------------------1.00---------------------
....................................................................................TCGGGGTCGGGGTCGGGC....................................................................................................................................................1813.003.00-----2.00-----------1.00-----------------------------------------------------------------------------------------------
...................................................................................GTCGGGGTCGGGGTCGGGC....................................................................................................................................................1913.003.00-----3.00-----------------------------------------------------------------------------------------------------------
....................................................................................TCGGGGTCGGGGTCGGGCCCCAAG..............................................................................................................................................2412.002.00------------2.00----------------------------------------------------------------------------------------------------
.......................................................TGGCCCGGCGTCGCCTCTG................................................................................................................................................................................1912.002.00------------------------------1.00----------------------------1.00-----------------------------------------------------
....................................................................................TCGGGGTCGGGGTCGGGCCCCA................................................................................................................................................2212.002.00----------------1.00------------------------------------------------------------------1.00-----------------------------
....................................................AGGTGGCCCGGCGTCGCCTC..................................................................................................................................................................................2012.002.00-------1.00-------------------------------------------1.00-------------------------------------------------------------
....................................................AGGTGGCCCGGCGTCGCCTCTGA...............................................................................................................................................................................2312.001.00----------------------------------------------------------------------------------1.00-------------------------1.00----
.............................................AGATGGTAGGTGGCCCGG...........................................................................................................................................................................................1812.002.00-----------------1.00----------------------------------------------------------------------------------------1.00------
.........................................GGGGAGATGGTAGGTGGC...............................................................................................................................................................................................1812.002.00-------------------------------------------1.00------1.00--------------------------------------------------------------
.......................................................TGGCCCGGCGTCGCCTCTGCCAGA...........................................................................................................................................................................2412.0025.00--------1.00--------------------------1.00-----------------------------------------------------------------------------
............................................GAGATGGTAGGTGGCCCGG...........................................................................................................................................................................................1912.002.00----------------------------------1.00--------------------------1.00---------------------------------------------------
............................AGCGGGCGGCGCGGGGGAGATGGTA.....................................................................................................................................................................................................2512.002.00---2.00-------------------------------------------------------------------------------------------------------------
..................................CGGCGCGGGGGAGATGGTA.....................................................................................................................................................................................................1912.002.00------------------------------------------------------------1.00------------------------------------------------1.00---
...........................AAGCGGGCGGCGCGGGGGAGACGG.......................................................................................................................................................................................................241.000.00--------------1.00--------------------------------------------------------------------------------------------------
....................................................AGGTGGCCCGGCGTCGCCTCTGCCTTTT..........................................................................................................................................................................2811.003.001.00----------------------------------------------------------------------------------------------------------------
.....................................CGCGGGGGAGATGGTAGG...................................................................................................................................................................................................1811.001.00--1.00--------------------------------------------------------------------------------------------------------------
....................................................AGGTGGCCCGGCGTCGCCTCTGAAA.............................................................................................................................................................................2511.001.00---------------------------------------------------------------------------------------------1.00-------------------
......................................GCGGGGGAGATGGTAGGT..................................................................................................................................................................................................1811.001.00-------1.00---------------------------------------------------------------------------------------------------------
..........AGGCCGGGGCCGGCCAGAAGCGG.........................................................................................................................................................................................................................2311.001.00-----------------------------------------------1.00-----------------------------------------------------------------
..........................................................................................................AGGTCGGCGCAGGCGGCG..............................................................................................................................1811.001.00-----------------------------------------------------------------------------1.00-----------------------------------
................................................................................................................................................................................................................................CGGAGGCGCGGGACCGCGGGGAGCGCGGGC301.000.00--------------1.00--------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................AGGGAGGAACGCGCCGCGGG.................................................2011.001.00---------------------------------------------------------------1.00-------------------------------------------------
..........................................................................CCCGTCGGGGTCGGGGTCGG............................................................................................................................................................2011.001.00----------------------1.00------------------------------------------------------------------------------------------
...........................AAGCGGGCGGCGCGGGGGAGATGGCAGG...................................................................................................................................................................................................281.000.00------------------1.00----------------------------------------------------------------------------------------------
.......................................................TGGCCCGGCGTCGCCTCTGT...............................................................................................................................................................................2011.002.00---------------------------------------------1.00-------------------------------------------------------------------
....................................................................................TCGGGGTCGGGGTCGGGCCCCTTT..............................................................................................................................................2411.001.00----1.00------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................GCGTCGGAGGCGCGGGAGGG..........201.000.00--------------------1.00--------------------------------------------------------------------------------------------
...................................................................................GTCGGGGTCGGGGTCGGGCCCCAAGGTCGG.........................................................................................................................................3011.001.00--1.00--------------------------------------------------------------------------------------------------------------
....................................................................................TCGGGGTCGGGGTCGGGCCCC.................................................................................................................................................2111.001.00-----------------------------1.00-----------------------------------------------------------------------------------
..........................................................................................................................................................................................................................TGGCGTCGGAGGCGCGGGACCGCGGG......2611.001.00--------------1.00--------------------------------------------------------------------------------------------------
............................................GAGATGGTAGGTGGCCCG............................................................................................................................................................................................1811.001.00--------------------------------------------------------------1.00--------------------------------------------------
....................................................AGGTGGCCCGGCGTCGCCTCTG................................................................................................................................................................................2211.001.00-----------------------------------------------------------------------1.00-----------------------------------------
.......................................CGGGGGAGATGGTAG....................................................................................................................................................................................................1511.001.00------------------------------------------------------------------------------------1.00----------------------------
...................................................TAGGTGGCCCGGCGTCGC.....................................................................................................................................................................................1811.001.00------------1.00----------------------------------------------------------------------------------------------------
.............................................................................GTCGGGGTCGGGGTCGGGGCCT.......................................................................................................................................................221.000.00--------------------1.00--------------------------------------------------------------------------------------------
.......................................................TGGCCCGGCGTCGCCTCTGCT..............................................................................................................................................................................2111.0020.00---------1.00-------------------------------------------------------------------------------------------------------
...................................................................................GTCGGGGTCGGGGTCGGGCAT..................................................................................................................................................2111.003.00--------1.00--------------------------------------------------------------------------------------------------------
......................................................GTGGCCCGGCGTCGCCTCGGC...............................................................................................................................................................................2111.003.00------1.00----------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................TGGATCCGAGGGAGGAACGCG........................................................2111.001.00-----------------1.00-----------------------------------------------------------------------------------------------
...........................................................................................................GGTCGGCGCAGGCGGCGCGCCGG........................................................................................................................231.000.00------------------1.00----------------------------------------------------------------------------------------------
.......................................CGGGGGAGATGGTAGGTG.................................................................................................................................................................................................1811.001.00--------------------------------------------------------------------------------------------------------1.00--------
..............................................................................................................................................................................................................................GTCGGAGGCGCGGGAC............1611.001.00----------------------------1.00------------------------------------------------------------------------------------
.....................................CGCGGGGGAGATGGTAGGTGGCC..............................................................................................................................................................................................2311.001.00---------------------------------------------------------------------1.00-------------------------------------------
.......................................................TGGCCCGGCGTCGCCTCTGAAAT............................................................................................................................................................................2311.002.00----------------------------------------1.00------------------------------------------------------------------------
....................................................................................................................................................AGCGAGCTGCGCGGGGCGTTTAA...............................................................................231.000.00-----------------------------------------------------------------------------------------------1.00-----------------
...................................................................................................................................TGTGGGAGGCCGAGCCTGGG...................................................................................................201.000.00--------------1.00--------------------------------------------------------------------------------------------------
....................................................................................TCGGGGTCGGGGTCGGGCCCAAA...............................................................................................................................................231.000.00--------------------------------------------------------------------------------1.00--------------------------------
........................................................GGCCCGGCGTCGCCTCTGA...............................................................................................................................................................................191.000.00--------1.00--------------------------------------------------------------------------------------------------------
...............................................ATGGTAGGTGGCCCGGCG.........................................................................................................................................................................................1811.001.00--------------------------------1.00--------------------------------------------------------------------------------
.......................................................................CTGCCCGTCGGGGTCACCA................................................................................................................................................................191.000.00---------------------------------------------------------------------------1.00-------------------------------------
....................................................AGGTGGCCCGGCGTCGCCTCTGCCATC...........................................................................................................................................................................2711.003.00-----------------------------------------------------------------------------------------1.00-----------------------
..............CGGGGCCGGCCAGAAGCGG.........................................................................................................................................................................................................................1911.001.00------------------------------------------------------------------------------1.00----------------------------------
............................................GAGATGGTAGGTGGCCCGGCGTC.......................................................................................................................................................................................2311.001.00----------------------------------------------------------------1.00------------------------------------------------
....................................................AGGTGGCCCGGCGTCGCCTCTGTT..............................................................................................................................................................................2411.001.00----------------------------------1.00------------------------------------------------------------------------------
....................CGGCCAGAAGCGGGC.......................................................................................................................................................................................................................1521.001.00------------------------------------------------------------------------------------------1.00----------------------
......................................................GTGGCCCGGCGTCGCCTCTGCATC............................................................................................................................................................................2411.008.00--------------------------------------------------------------------1.00--------------------------------------------
......................................................GTGGCCCGGCGTCGCCTCTGCTA.............................................................................................................................................................................2311.008.00-------------------------------------------------------1.00---------------------------------------------------------
..............CGGGGCCGGCCAGAAGCGGGC.......................................................................................................................................................................................................................2111.001.00-------------------------------------------------------------------------------------------------1.00---------------
.......................................................TGGCCCGGCGTCGCCTCTGCAAA............................................................................................................................................................................2311.0020.00--------------------------1.00--------------------------------------------------------------------------------------
.....................................................GGTGGCCCGGCGTCGCCTCTGTT..............................................................................................................................................................................231.000.00----------------------------------------------------------------------------------------1.00------------------------
....................................................................................TCGGGGTCGGGGTCGGGCCCCAA...............................................................................................................................................2311.001.00-----------------------------------------------------------------------------------------------------1.00-----------
........................................GGGGGAGATGGTAGGTGGCCCGGCGTCGC.....................................................................................................................................................................................2911.001.00--------------------------------------1.00--------------------------------------------------------------------------
.......................................................TGGCCCGGCGTCGCCTCTGCAA.............................................................................................................................................................................2211.0020.00--------------------------------------------------------------------------1.00--------------------------------------
............................................................................................................GTCGGCGCAGGCGGCGGAGG..........................................................................................................................201.000.00-----------------------------------1.00-----------------------------------------------------------------------------
.........AAGGCCGGGGCCGGCCAG...............................................................................................................................................................................................................................1811.001.00-----------------------1.00-----------------------------------------------------------------------------------------
................................GGCGGCGCGGGGGAGATGGTATAA..................................................................................................................................................................................................241.000.00--1.00--------------------------------------------------------------------------------------------------------------
.........................................GGGGAGATGGTAGGTGGCCCGGCGTCGC.....................................................................................................................................................................................2811.001.00--------------------------------1.00--------------------------------------------------------------------------------
...........................AAGCGGGCGGCGCGGGG..............................................................................................................................................................................................................1711.001.00-------------------------------------------------------------------------------1.00---------------------------------
..........................................................................................................................................................................GCGTGGATCCGAGGGAGG..............................................................1811.001.00-------------------------------------1.00---------------------------------------------------------------------------
..................................CGGCGCGGGGGAGATGGT......................................................................................................................................................................................................1811.001.00--1.00--------------------------------------------------------------------------------------------------------------
.......................................................TGGCCCGGCGTCGCCTCTGCA..............................................................................................................................................................................2111.0020.00---------1.00-------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................CGTCGGAGGCGCGGGT.............161.000.00---------------------------1.00-------------------------------------------------------------------------------------
.......................................................TGGCCCGGCGTCGCCTCTGAAA.............................................................................................................................................................................2211.002.00------------------------------------1.00----------------------------------------------------------------------------
..............................................................................................................................CTGGATGTGGGAGGCCGAGCCCAGC...................................................................................................2511.001.00--------------------1.00--------------------------------------------------------------------------------------------
.......................................................TGGCCCGGCGTCGCCTATGC...............................................................................................................................................................................201.000.00------1.00----------------------------------------------------------------------------------------------------------
......................................................GTGGCCCGGCGTCGCCTCTGCC..............................................................................................................................................................................2211.001.00----------------------------------------------------1.00------------------------------------------------------------
.............................................................................................GGGTCGGGCCCCAAGCA............................................................................................................................................171.000.00------------------------1.00----------------------------------------------------------------------------------------
................................................................................................................................................................................................CGCCGCGGGCCCGCGGC.........................................171.000.00--------1.00--------------------------------------------------------------------------------------------------------
....................................................................................TCGGGGTCGGGGTCGGGCA...................................................................................................................................................1911.003.00------------------------------1.00----------------------------------------------------------------------------------
..........................................................................................................AGGTCGGCGCAGGCGGCGCGCCGGA.......................................................................................................................251.000.00------------------1.00----------------------------------------------------------------------------------------------
...........................................................................................................................................................................CGTGGATCCGAGGGAGGAACTCTG.......................................................241.000.00---------------------------------------------------------------------------------1.00-------------------------------
......................................................................................................CCCAAGGTCGGCGCAGGC..................................................................................................................................1811.001.00------------1.00----------------------------------------------------------------------------------------------------
..........................................GGGAGATGGTAGGTGGCCCGGCG.........................................................................................................................................................................................2311.001.00-------------------------------------------------------------------------1.00---------------------------------------
..............................................................................................GGTCGGGCCCCAAGGAGTG.........................................................................................................................................191.000.00------1.00----------------------------------------------------------------------------------------------------------
....................................................................................TCGGGGTCGGGGTCGGGCCTAAA...............................................................................................................................................2311.004.00--------------------------------------------1.00--------------------------------------------------------------------
................................................................................................................................................................................................CGCCGCGGGCCCGCGGCGG.......................................191.000.00-----------------------------------------------------------------------------------------------------------1.00-----
...................................................................GCCTCTGCCCGTCGGGGTCGG..................................................................................................................................................................2111.001.00----------------------------------------------------------------------------1.00------------------------------------
..........................................................CCCGGCGTCGCCTCTGCC..............................................................................................................................................................................1811.001.00-1.00---------------------------------------------------------------------------------------------------------------
.......................................................TGGCCCGGCGTCGCCTCTGCAG.............................................................................................................................................................................2211.0020.00------------------------------------------------1.00----------------------------------------------------------------
..............................................................................TCGGGGTCGGGGTCGGGGTCGGG.....................................................................................................................................................2340.250.25--------------------------------------------------------------------------------------------------------------0.25--
...............................................................................CGGGGTCGGGGTCGGGGTCGGG.....................................................................................................................................................2260.170.17---------------------------------------------------------------------------------------------------------------0.17-
...............................................................................CGGGGTCGGGGTCGGGGTCG.......................................................................................................................................................2090.110.11---------------------------------------0.11-------------------------------------------------------------------------

Antisense strand
CCTGCGCAGAAGGCCGGGGCCGGCCAGAAGCGGGCGGCGCGGGGGAGATGGTAGGTGGCCCGGCGTCGCCTCTGCCCGTCGGGGTCGGGGTCGGGGTCGGGCCCCAAGGTCGGCGCAGGCGGCGCGCTGGATGTGGGAGGCCGAGCCCAGCGAGCTGCGCGGGGCGTTCCGCGTGGATCCGAGGGAGGAACGCGCCGCGGGCCCGCGAGCCGGAGCGGTGGCGTCGGAGGCGCGGGACCGCGGGGAGCGC
.........................................................(((((((.(((((((.((((....)))).)))).))).)))))))....................................................................................................................................................
..................................................51.................................................102..................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR189782SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR029125(GSM416754)
U2OS. (cell line)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR029124(GSM416753)
HeLa. (hela)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR189783SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		SRR189784GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR191478(GSM715588)
30genomic small RNA (size selected RNA from t. (breast)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR191587(GSM715697)
50genomic small RNA (size selected RNA from t. (breast)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR040037(GSM532922)
G243T. (cervix)		SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)		SRR191516(GSM715626)
66genomic small RNA (size selected RNA from t. (breast)		SRR029129(GSM416758)
SW480. (cell line)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		GSM339995(GSM339995)
hues6NP. (cell line)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191405(GSM715515)
55genomic small RNA (size selected RNA from t. (breast)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		GSM416733(GSM416733)
HEK293. (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR029128(GSM416757)
H520. (cell line)		SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)		SRR037931(GSM510469)
293GFP. (cell line)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577741(Rovira)
total RNA. (breast)		SRR191620(GSM715730)
167genomic small RNA (size selected RNA from . (breast)		GSM339994(GSM339994)
hues6. (cell line)		SRR191416(GSM715526)
34genomic small RNA (size selected RNA from t. (breast)		TAX577590(Rovira)
total RNA. (breast)		SRR038859(GSM458542)
MM386. (cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR553576(SRX182782)
source: Testis. (testes)		TAX577579(Rovira)
total RNA. (breast)		SRR038860(GSM458543)
MM426. (cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038857(GSM458540)
D20. (cell line)		SRR189786SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191585(GSM715695)
196genomic small RNA (size selected RNA from . (breast)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR029131(GSM416760)
MCF7. (cell line)		SRR040020(GSM532905)
G699N_2. (cervix)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR040027(GSM532912)
G220T. (cervix)		TAX577580(Rovira)
total RNA. (breast)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
............................AGCGGGCGGCGCGGGGGCC........................................................................................................................................................................................................... 191.000.00---------------------------------------------------------------------------------------------------1.00-------------
................................................................................................................................................................GGGGCGTTCCGCGTGCGCC....................................................................... 191.000.00---------------------------1.00-------------------------------------------------------------------------------------
.....................................................................................................................................................................................................CGGGCCCGCGAGCCGAGC................................... 181.000.00-------------------------------------------------------------------------------------1.00---------------------------
.....................................................................................................CCCCAAGGTCGGCGCAGC................................................................................................................................... 181.000.00--------------------------------------------------------1.00--------------------------------------------------------
......................................................................................................................................................................................................GGGCCCGCGAGCCGGAAT.................................. 181.000.00------1.00----------------------------------------------------------------------------------------------------------
..............................................................CGGGCAGAGGCGACGC............................................................................................................................................................................ 1611.001.00-------------------------1.00---------------------------------------------------------------------------------------
.......................................................................CTGCCCGTCGGGGTCCCT................................................................................................................................................................. 181.000.00------------------------------------------------------1.00----------------------------------------------------------
..............................................................ACGGGCAGAGGCGACGC........................................................................................................................................................................... 1711.001.00---------------------------------------------------------------------------------------------------------1.00-------
......................................................................................................................................................................................................GGGCCCGCGAGCCGGACTC................................. 191.000.00-------1.00---------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................GGGCCCGCGAGCCGGAACT................................. 191.000.00-------1.00---------------------------------------------------------------------------------------------------------
...........................................CCACCTACCATCTCC................................................................................................................................................................................................ 1590.110.11----------------------------------------------------------------------------------------------------------------0.11