ID: uc010aev.2_intron_71_0_chr13_77835511_r.3p
GENE: (11)
chr13:77835461-77835710-


(7)
CELL-LINE
(1)
HEART
(1)
HELA
(1)
LIVER
(6)
OTHER
(3)
SKIN

Sense strand
GCTATTATGAACTGTGTCTTCTTGGCAAAATATGTGTATTTCTTGCTCAACTCCCAGAAGCTGAATAGTGTAAAAAAGAGTTTGTTTTTATGTGAATTTTATTTTTCAATAAAATATTGATGTCCTTTTTTTTCCTCATGTGAAACCTGATGCACTATTCCAAAAAGTACCATAATTCCTTTTTTTTTTTAATACATAAGATATATTACACTGGCAAATACCAGAGTCTTGGAATCAAACAAGGTGGTCC
..............................................................((((((((((((((((((..((((..(((.((((........)))).....)))..))))..)))))))))..(((.((...)).))).)))))))))..........................................................................................
..................................................51...................................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189785SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR189784SRR189787SRR343336SRR189782SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189786GSM359181(GSM359181)
hela_phil_smrna_nuc. (hela)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
................................................................................................................................................................................TCCTTTTTTTTTTTAATCTAC.....................................................2146.000.0023.0019.001.001.002.00--------------
..............................................................................................................................................................................ATTCCTTTTTTTTTTTAAGTG.......................................................216.000.001.004.00--1.00--------------
..............................................................................................................................................................................ATTCCTTTTTTTTTTTAATTTTT.....................................................232.000.00---2.00---------------
..............................................................................................................................................................................ATTCCTTTTTTTTTTTACATG.......................................................212.000.00-1.00---1.00-------------
..............................................................................................................................................................................ATTCCTTTTTTTTTTTAACATG......................................................222.000.002.00------------------
...........................................................GCTGAATAGTGTAAAACTGT...........................................................................................................................................................................201.000.00------1.00------------
.....................................................................................................................TGATGTCCTTTTTTTTTTG..................................................................................................................191.000.00-----------1.00-------
..........................................................................................................................................................................CATAATTCCTTTTTTTTAAG............................................................201.000.00-1.00-----------------
...............................................................................................................................................................................TTCCTTTTTTTTTTTAATCACG.....................................................221.000.00-1.00-----------------
..........................................................................................................................................................................CATAATTCCTTTTTTTTCTG............................................................201.000.00-----1.00-------------
..................................................................................................................TATTGATGTCCTTTTTTTTCCTCATG..............................................................................................................2611.001.00---------------1.00---
..................................................................................................................................................................................CTTTTTTTTTTTAATACATTATT.................................................231.000.00-----1.00-------------
..........ACTGTGTCTTCTTGGCAAAATATGTG......................................................................................................................................................................................................................2611.001.00-------------1.00-----
..............................................................................................................................................................................ATTCCTTTTTTTTTTTAACGG.......................................................211.000.001.00------------------
..............................................................................................................................................................................ATTCCTTTTTTTTTTTAATTAG......................................................221.000.00----1.00--------------
.....................................................................................................................TGATGTCCTTTTTTTTGTCC.................................................................................................................201.000.00--------------1.00----
................................................................................................................................................................................TCCTTTTTTTTTTTAATCTAG.....................................................211.000.00-1.00-----------------
..............................................................................................................................................................................ATTCCTTTTTTTTTTTAAGATC......................................................221.000.00---1.00---------------
.....................................................................................................................TGATGTCCTTTTTTTTCCGTTC...............................................................................................................221.000.00---------1.00---------
.....................................................................................................................TGATGTCCTTTTTTTTCTTG.................................................................................................................201.000.00--------1.00----------
....................................................................................................................................................................................................................GGCAAATACCAGAGTGGT....................181.000.00----------1.00--------
..............................................................................................................................................................................ATTCCTTTTTTTTTTTAATGTG......................................................221.000.001.00------------------
..................................................................................................................................................................................CTTTTTTTTTTTAATACATAACAG................................................241.000.00--1.00----------------
...........................................................GCTGAATAGTGTAAACTGT............................................................................................................................................................................191.000.00------1.00------------
................................................................................................................................................................................TCCTTTTTTTTTTTACACG.......................................................191.000.001.00------------------
..........................................................................................................................................................................CATAATTCCTTTTTTTTTTAGC..........................................................221.000.00-----1.00-------------
.......................................................................................................................ATGTCCTTTTTTTTCCTTGG...............................................................................................................201.000.00---1.00---------------
................................................................................................................................................................................TCCTTTTTTTTTTTACTAG.......................................................191.000.00----1.00--------------
..............................................................................................................................................................................ATTCCTTTTTTTTTTTAGAGG.......................................................211.000.00-1.00-----------------
..............................................................................................................................................................................ATTCCTTTTTTTTTTTAAGCG.......................................................211.000.001.00------------------
..........................................................................................TGTGAATTTTATTTTGATA.............................................................................................................................................191.000.001.00------------------
.................................................................................................................................................................................CCTTTTTTTTTTTAATACTCAG...................................................221.000.00--1.00----------------
......................................................CAGAAGCTGAATAGTGTA..................................................................................................................................................................................1811.001.00----------------1.00--
...............................................................................................................................................................................TTCCTTTTTTTTTTTACATC.......................................................201.000.00--1.00----------------
...............................................................................................................................................................................................................................GAGTCTTGGAATCAAACAAGGTGGTC.2611.001.00-------1.00-----------
..............................................................................................................................................................................ATTCCTTTTTTTTTTTAATTTT......................................................221.000.00--1.00----------------
.......................................................................................................................ATGTCCTTTTTTTTCATGC................................................................................................................191.000.00------------1.00------
.........................................................................................................................................................................CCATAATTCCTTTTTTTCTC.............................................................201.000.00-----1.00-------------
................................................................................................................................................................................TCCTTTTTTTTTTTACATC.......................................................191.000.00--1.00----------------
..............................................................................................................................................................................ATTCCTTTTTTTTTTTAAGGG.......................................................211.000.00--1.00----------------
.............................................................................................................................................................................AATTCCTTTTTTTTTTTAAGG........................................................211.000.001.00------------------
............................................................................................................................CTTTTTTTTCCTCATGTGAAACCTGATGC.................................................................................................2911.001.00-----------------1.00-
...............................................................................................................................................................................TTCCTTTTTTTTTTTACCAG.......................................................201.000.00--1.00----------------
..............................................................................................................................................................................ATTCCTTTTTTTTTTTAATTTTC.....................................................231.000.00---1.00---------------
..............................................................................................................................................................................ATTCCTTTTTTTTTTTAATA........................................................2040.750.75-0.75-----------------
..............................................................................................................................................................................ATTCCTTTTTTTTTTTAATAT.......................................................2140.500.75-0.25--0.25--------------
........................................................................................................................................................................................................ATATATTACACTGGC...................................1530.330.33------------------0.33
..............................................................................................................................................................................ATTCCTTTTTTTTTTTAATAGG......................................................2240.250.75--0.25----------------

Antisense strand
GCTATTATGAACTGTGTCTTCTTGGCAAAATATGTGTATTTCTTGCTCAACTCCCAGAAGCTGAATAGTGTAAAAAAGAGTTTGTTTTTATGTGAATTTTATTTTTCAATAAAATATTGATGTCCTTTTTTTTCCTCATGTGAAACCTGATGCACTATTCCAAAAAGTACCATAATTCCTTTTTTTTTTTAATACATAAGATATATTACACTGGCAAATACCAGAGTCTTGGAATCAAACAAGGTGGTCC
..............................................................((((((((((((((((((..((((..(((.((((........)))).....)))..))))..)))))))))..(((.((...)).))).)))))))))..........................................................................................
..................................................51...................................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189785SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR189784SRR189787SRR343336SRR189782SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189786GSM359181(GSM359181)
hela_phil_smrna_nuc. (hela)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
..................................................................AGTGTAAAAAAGAGTTCA...................................................................................................................................................................... 181.000.001.00------------------
..................................................................AGTGTAAAAAAGAGTTTAG..................................................................................................................................................................... 191.000.00--1.00----------------