uc010aev.2_intron_62_0_chr13_77792093

CTTAAAGTCAGCAACTGTCTTTTTCATCTTTGTTTACCTAGTACCTGGAATGGAGATAGGCGTTTAGCACTTAAATGTTTACTGAATATTCTTATGAGTGCCTTTTATCTTTCCTACTCCTTGTTGCATTGCTTACTTATTGTTTTTATTTTAGTTGAGTTTTGTAAGAAATTGACTTACTTTTTTTTTTTTTAACCTAGGGGATGTCCCACTCTTGTTCAAGCATTGCCAGGCCCTAGCACACAAGTCA ...............................................................................................(((((..............))))).((.(((((..(((((.(((..((....))..))).)))))..))))).))................................................................................ ...............................................................................................96......................................................................................................200................................................	Size	Perfect hit	Total Norm	Perfect Norm	SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line)	SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line)	SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR343337	SRR330889(SRX091727) tissue: skin psoriatic uninvolveddisease stat. (skin)	SRR343336	TAX577739(Rovira) total RNA. (breast)	SRR330877(SRX091715) tissue: skin psoriatic involveddisease state:. (skin)	SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver)	SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver)
...............................................................................................................................................................................CTTACTTTTTTTTTTTTTAACCAAG..................................................	25		17.00	0.00	5.00	6.00	3.00	3.00	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................CTTACTTTTTTTTTTTTTACTTG....................................................	23		13.00	0.00	10.00	3.00	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................CTTACTTTTTTTTTTTTCTTG......................................................	21		5.00	0.00	1.00	-	2.00	2.00	-	-	-	-	-	-	-	-	-	-
..................................................................................................................................................................................ACTTTTTTTTTTTTTAACCTATTTG...............................................	25		4.00	0.00	1.00	2.00	1.00	-	-	-	-	-	-	-	-	-	-	-
..............................................................................................................................................................................ACTTACTTTTTTTTTTTTCTG.......................................................	21		3.00	0.00	-	1.00	1.00	1.00	-	-	-	-	-	-	-	-	-	-
..................................................................................................................................................................................ACTTTTTTTTTTTTTAACCGG...................................................	21		3.00	0.00	2.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-
................................................................................................................................................................................TTACTTTTTTTTTTTTTATTTG....................................................	22		3.00	0.00	1.00	1.00	1.00	-	-	-	-	-	-	-	-	-	-	-
....................................................................................................CCTTTTATCTTTCCTGA.....................................................................................................................................	17		3.00	0.00	-	-	-	-	-	-	-	2.00	-	1.00	-	-	-	-
...............................................................................................................................................................................CTTACTTTTTTTTTTTTTATTTT....................................................	23		2.00	0.00	1.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................CTTACTTTTTTTTTTTTTAACCAAT..................................................	25		2.00	0.00	-	1.00	1.00	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................CTTACTTTTTTTTTTTTTACCAG....................................................	23		2.00	0.00	1.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................CTTACTTTTTTTTTTTTCTAG......................................................	21		2.00	0.00	-	-	1.00	-	1.00	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................CTTACTTTTTTTTTTTTCCG.......................................................	20		2.00	0.00	-	-	-	2.00	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................CTTACTTTTTTTTTTTTTCATT.....................................................	22		2.00	0.00	-	-	-	1.00	-	1.00	-	-	-	-	-	-	-	-
..............................................................................................................................................................................ACTTACTTTTTTTTTTTTTCTTT.....................................................	23		2.00	0.00	-	-	-	-	1.00	-	1.00	-	-	-	-	-	-	-
..................................................................................................................................................................................ACTTTTTTTTTTTTTAACCCG...................................................	21		1.00	0.00	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................CTTACTTTTTTTTTTTTTAACTTG...................................................	24		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................CTTACTTTTTTTTTTTTTAGCTT....................................................	23		1.00	0.00	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-
...............................................................................................................................................................................CTTACTTTTTTTTTTTTTAACAAAG..................................................	25		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
..................................................................................................................................................................................ACTTTTTTTTTTTTTAACCG....................................................	20		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-
...............................GTTTACCTAGTACCTGG..........................................................................................................................................................................................................	17	1	1.00	1.00	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-
.........................................................................................................................................TATTGTTTTTATTTTAGTTGAGTCGT.......................................................................................	26		1.00	0.00	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................CTTACTTTTTTTTTTTTCTCT......................................................	21		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................CTTACTTTTTTTTTTTTTACTCG....................................................	23		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................CTTACTTTTTTTTTTTTTACCC.....................................................	22		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
..............................................................................................................................................................................ACTTACTTTTTTTTTTTTTAACTTTC..................................................	26		1.00	0.00	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-
..............................................................................................................................................................................ACTTACTTTTTTTTTTTTCTTG......................................................	22		1.00	0.00	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-
..........................................................................................................................................................................................TTTTTTTAACCTAGGATTG.............................................	19		1.00	0.00	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-
..............................................................................................................................................................................ACTTACTTTTTTTTTTTTGCC.......................................................	21		1.00	0.00	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................CTTACTTTTTTTTTTTTTCTAG.....................................................	22		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
................................................................................................................................................................................TTACTTTTTTTTTTTTTAACAATT..................................................	24		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................................................................CATTGCCAGGCCCTAGCACACA.....	22	1	1.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-
..............................................................................................................................................................................ACTTACTTTTTTTTTTTTGGAG......................................................	22		1.00	0.00	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-
..............................................................................................................................................................................ACTTACTTTTTTTTTTTTTATAG.....................................................	23		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
...................................................................................................................................................................................CTTTTTTTTTTTTTAACCTATAG................................................	23		1.00	0.00	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-
.......................................................................................................................................................................................................GGGGATGTCCCACTCTTGTTCAAGC..........................	25	1	1.00	1.00	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-
..............................................................................................................................................................................ACTTACTTTTTTTTTTTTTAATTG....................................................	24		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
..............................................................................................................................................................................ACTTACTTTTTTTTTTTACC........................................................	20		1.00	0.00	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-
...........................................................................................................................................................................TTGACTTACTTTTTTTTTTTTGGAG......................................................	25		1.00	0.00	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-
..............................................................................................................................................................................ACTTACTTTTTTTTTTTAGTC.......................................................	21		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................CTTACTTTTTTTTTTTTTACTAC....................................................	23		1.00	0.00	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-
..............................................................................................................................................................................ACTTACTTTTTTTTTTTAACG.......................................................	21		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................CTTACTTTTTTTTTTTTTATATT....................................................	23		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
................................................................................................................................................................................TTACTTTTTTTTTTTTTATAAT....................................................	22		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-
................................................................................................................................................................................TTACTTTTTTTTTTTTTATAAG....................................................	22		1.00	0.00	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-
..............................................................................................................................................................................ACTTACTTTTTTTTTCCG..........................................................	18		1.00	0.00	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-
...................................................................................................................................................................................CTTTTTTTTTTTTTAACCTCTTT................................................	23		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................CTTACTTTTTTTTTTTTTATTTG....................................................	23		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
................................................................................................................................................................................TTACTTTTTTTTTTTTTACG......................................................	20		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
.............................................TGGAATGGAGATAGGCGTTT.........................................................................................................................................................................................	20	1	1.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00
..............................................................................................................................................................................ACTTACTTTTTTTTTCG...........................................................	17		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-
..............................................................................................................................................................................ACTTACTTTTTTTTTTTTTAACCTTA..................................................	26		1.00	0.00	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-
................................................................................................................................................................................TTACTTTTTTTTTTTTTAACCAAG..................................................	24		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
................................................................................................................................................................................TTACTTTTTTTTTTTTTACTCT....................................................	22		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................CTTACTTTTTTTTTTTTCTGG......................................................	21		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-
........................................................................................................................................................................................TTTTTTTTTAACCTAGGGGAGAGG..........................................	24		1.00	0.00	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-

CTTAAAGTCAGCAACTGTCTTTTTCATCTTTGTTTACCTAGTACCTGGAATGGAGATAGGCGTTTAGCACTTAAATGTTTACTGAATATTCTTATGAGTGCCTTTTATCTTTCCTACTCCTTGTTGCATTGCTTACTTATTGTTTTTATTTTAGTTGAGTTTTGTAAGAAATTGACTTACTTTTTTTTTTTTTAACCTAGGGGATGTCCCACTCTTGTTCAAGCATTGCCAGGCCCTAGCACACAAGTCA
...............................................................................................(((((..............))))).((.(((((..(((((.(((..((....))..))).)))))..))))).))................................................................................
...............................................................................................96......................................................................................................200................................................

Size

Perfect hit

Total Norm

Perfect Norm

SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)

SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)

SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR343337

SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR343336

TAX577739(Rovira)
total RNA. (breast)

SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)

SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)

SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)

...............................................................................................................................................................................CTTACTTTTTTTTTTTTTAACCAAG..................................................

17.00

0.00

5.00

6.00

3.00

...............................................................................................................................................................................CTTACTTTTTTTTTTTTTACTTG....................................................

13.00

0.00

10.00

3.00

...............................................................................................................................................................................CTTACTTTTTTTTTTTTCTTG......................................................

5.00

0.00

1.00

2.00

..................................................................................................................................................................................ACTTTTTTTTTTTTTAACCTATTTG...............................................

4.00

0.00

1.00

2.00

1.00

..............................................................................................................................................................................ACTTACTTTTTTTTTTTTCTG.......................................................

3.00

0.00

1.00

..................................................................................................................................................................................ACTTTTTTTTTTTTTAACCGG...................................................

3.00

0.00

2.00

1.00

................................................................................................................................................................................TTACTTTTTTTTTTTTTATTTG....................................................

3.00

0.00

1.00

....................................................................................................CCTTTTATCTTTCCTGA.....................................................................................................................................

3.00

0.00

2.00

1.00

...............................................................................................................................................................................CTTACTTTTTTTTTTTTTATTTT....................................................

2.00

0.00

1.00

...............................................................................................................................................................................CTTACTTTTTTTTTTTTTAACCAAT..................................................

2.00

0.00

1.00

...............................................................................................................................................................................CTTACTTTTTTTTTTTTTACCAG....................................................

2.00

0.00

1.00

...............................................................................................................................................................................CTTACTTTTTTTTTTTTCTAG......................................................

2.00

0.00

1.00

...............................................................................................................................................................................CTTACTTTTTTTTTTTTCCG.......................................................

2.00

0.00

2.00

...............................................................................................................................................................................CTTACTTTTTTTTTTTTTCATT.....................................................

2.00

0.00

1.00

..............................................................................................................................................................................ACTTACTTTTTTTTTTTTTCTTT.....................................................

2.00

0.00

1.00

..................................................................................................................................................................................ACTTTTTTTTTTTTTAACCCG...................................................

1.00

0.00

1.00

...............................................................................................................................................................................CTTACTTTTTTTTTTTTTAACTTG...................................................

1.00

0.00

1.00

...............................................................................................................................................................................CTTACTTTTTTTTTTTTTAGCTT....................................................

1.00

0.00

1.00

...............................................................................................................................................................................CTTACTTTTTTTTTTTTTAACAAAG..................................................

1.00

0.00

1.00

..................................................................................................................................................................................ACTTTTTTTTTTTTTAACCG....................................................

1.00

0.00

1.00

...............................GTTTACCTAGTACCTGG..........................................................................................................................................................................................................

1.00

.........................................................................................................................................TATTGTTTTTATTTTAGTTGAGTCGT.......................................................................................

1.00

0.00

1.00

...............................................................................................................................................................................CTTACTTTTTTTTTTTTCTCT......................................................

1.00

0.00

1.00

...............................................................................................................................................................................CTTACTTTTTTTTTTTTTACTCG....................................................

1.00

0.00

1.00

...............................................................................................................................................................................CTTACTTTTTTTTTTTTTACCC.....................................................

1.00

0.00

1.00

..............................................................................................................................................................................ACTTACTTTTTTTTTTTTTAACTTTC..................................................

1.00

0.00

1.00

..............................................................................................................................................................................ACTTACTTTTTTTTTTTTCTTG......................................................

1.00

0.00

1.00

..........................................................................................................................................................................................TTTTTTTAACCTAGGATTG.............................................

1.00

0.00

1.00

..............................................................................................................................................................................ACTTACTTTTTTTTTTTTGCC.......................................................

1.00

0.00

1.00

...............................................................................................................................................................................CTTACTTTTTTTTTTTTTCTAG.....................................................

1.00

0.00

1.00

................................................................................................................................................................................TTACTTTTTTTTTTTTTAACAATT..................................................

1.00

0.00

1.00

...............................................................................................................................................................................................................................CATTGCCAGGCCCTAGCACACA.....

1.00

..............................................................................................................................................................................ACTTACTTTTTTTTTTTTGGAG......................................................

1.00

0.00

1.00

..............................................................................................................................................................................ACTTACTTTTTTTTTTTTTATAG.....................................................

1.00

0.00

1.00

...................................................................................................................................................................................CTTTTTTTTTTTTTAACCTATAG................................................

1.00

0.00

1.00

.......................................................................................................................................................................................................GGGGATGTCCCACTCTTGTTCAAGC..........................

1.00

..............................................................................................................................................................................ACTTACTTTTTTTTTTTTTAATTG....................................................

1.00

0.00

1.00

..............................................................................................................................................................................ACTTACTTTTTTTTTTTACC........................................................

1.00

0.00

1.00

...........................................................................................................................................................................TTGACTTACTTTTTTTTTTTTGGAG......................................................

1.00

0.00

1.00

..............................................................................................................................................................................ACTTACTTTTTTTTTTTAGTC.......................................................

1.00

0.00

1.00

...............................................................................................................................................................................CTTACTTTTTTTTTTTTTACTAC....................................................

1.00

0.00

1.00

..............................................................................................................................................................................ACTTACTTTTTTTTTTTAACG.......................................................

1.00

0.00

1.00

...............................................................................................................................................................................CTTACTTTTTTTTTTTTTATATT....................................................

1.00

0.00

1.00

................................................................................................................................................................................TTACTTTTTTTTTTTTTATAAT....................................................

1.00

0.00

1.00

................................................................................................................................................................................TTACTTTTTTTTTTTTTATAAG....................................................

1.00

0.00

1.00

..............................................................................................................................................................................ACTTACTTTTTTTTTCCG..........................................................

1.00

0.00

1.00

...................................................................................................................................................................................CTTTTTTTTTTTTTAACCTCTTT................................................

1.00

0.00

1.00

...............................................................................................................................................................................CTTACTTTTTTTTTTTTTATTTG....................................................

1.00

0.00

1.00

................................................................................................................................................................................TTACTTTTTTTTTTTTTACG......................................................

1.00

0.00

1.00

.............................................TGGAATGGAGATAGGCGTTT.........................................................................................................................................................................................

1.00

..............................................................................................................................................................................ACTTACTTTTTTTTTCG...........................................................

1.00

0.00

1.00

..............................................................................................................................................................................ACTTACTTTTTTTTTTTTTAACCTTA..................................................

1.00

0.00

1.00

................................................................................................................................................................................TTACTTTTTTTTTTTTTAACCAAG..................................................

1.00

0.00

1.00

................................................................................................................................................................................TTACTTTTTTTTTTTTTACTCT....................................................

1.00

0.00

1.00

...............................................................................................................................................................................CTTACTTTTTTTTTTTTCTGG......................................................

1.00

0.00

1.00

........................................................................................................................................................................................TTTTTTTTTAACCTAGGGGAGAGG..........................................

1.00

0.00

1.00