ID: uc009zwc.2_intron_8_0_chr12_112609068_r.5p
GENE: (60)
chr12:112610275-112610524-


(1)
AGO1.ip 		(2)
AGO2.ip 		(1)
B-CELL 		(2)
BRAIN 		(18)
BREAST 		(8)
CELL-LINE 		(3)
CERVIX 		(1)
HEART 		(1)
KIDNEY 		(2)
LIVER 		(1)
OTHER 		(5)
SKIN 		(2)
UTERUS

Sense strand
GTACCTGGACCCCGCGGATGCTGCTGACCCCAGAGTGGCCTGTCTCCTGAGTATGTGGCCCTGGGCCTATCCCCTCCCCTGCTGCCTGATGCGGGCATGCCCCATGACAAGGGGCATTTACAAGGGCTAGATTCATTTAGACGTCCATCGAACGAACACTTATGAACACCTGCTATGCGCCAGGTGTGCAAGGAAGAGTGGGCTGACGAAACAGGGAGGGCAAGGCAGGGAGCCAGGACTGTGGCCTAAT
....................................................((.((((((((((......)))...(((((........))))).(((((((.......))))))).....))))))).))........((.(((.((....)).......((.((((((((.....)).)))))).)).)))...))...................................................
..................................................51...................................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR037937(GSM510475)
293cand2. (cell line)		SRR040036(GSM532921)
G243N. (cervix)		TAX577453(Rovira)
total RNA. (breast)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577580(Rovira)
total RNA. (breast)		GSE20417(GSM514985)
Colon and lung cancer pool. 		TAX577739(Rovira)
total RNA. (breast)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR040040(GSM532925)
G612N. (cervix)		SRR037935(GSM510473)
293cand3. (cell line)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577744(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		TAX577745(Rovira)
total RNA. (breast)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR191633(GSM715743)
85genomic small RNA (size selected RNA from t. (breast)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR191581(GSM715691)
104genomic small RNA (size selected RNA from . (breast)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)		TAX577741(Rovira)
total RNA. (breast)		SRR040039(GSM532924)
G531T. (cervix)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577590(Rovira)
total RNA. (breast)		TAX577742(Rovira)
total RNA. (breast)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR343335TAX577579(Rovira)
total RNA. (breast)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577589(Rovira)
total RNA. (breast)		SRR191625(GSM715735)
32genomic small RNA (size selected RNA from t. (breast)		TAX577738(Rovira)
total RNA. (breast)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		TAX577743(Rovira)
total RNA. (breast)
........................................................GGCCCTGGGCCTATCCTAGA..............................................................................................................................................................................2043.000.0018.007.00-2.003.00--1.001.00---1.001.001.00-1.00-1.00---1.00---1.00---1.00-1.00---------1.001.00---
.........................................................GCCCTGGGCCTATCCTAGA..............................................................................................................................................................................1930.000.004.002.004.001.00-1.00--2.002.002.001.00--1.00---1.00------1.00--1.001.00-1.00-1.001.00---------1.001.001.00
....................................................................................................................................................................................................................................GGAGCCAGGACTGTGCTGT...193.000.00------3.00----------------------------------------
..............CGGATGCTGCTGACCCCAGAGTGG....................................................................................................................................................................................................................2412.002.00-----------------2.00-----------------------------
........................................................GGCCCTGGGCCTATCCTAGT..............................................................................................................................................................................202.000.00-----1.00----------1.00------------------------------
.........................................................GCCCTGGGCCTATCCTAG...............................................................................................................................................................................182.000.00--2.00--------------------------------------------
........................................................GGCCCTGGGCCTATCCTTGA..............................................................................................................................................................................202.000.00---1.00--------------------------------1.00----------
........................................................GGCCCTGGGCCTATCCTAG...............................................................................................................................................................................192.000.00-------1.00-----------------------------1.00---------
........................................................GGCCCTGGGCCTATCCTAGG..............................................................................................................................................................................202.000.002.00----------------------------------------------
....CTGGACCCCGCGGATGCTGCTGAC..............................................................................................................................................................................................................................2412.002.00-----------------------1.00---1.00-------------------
........................................................GGCCCTGGGCCTATCCTA................................................................................................................................................................................181.000.00---------------------1.00-------------------------
........................................................GGCCCTGGGCCTATCCTGGG..............................................................................................................................................................................201.000.00---1.00-------------------------------------------
........................................................GGCCCTGGGCCTATCCGAGA..............................................................................................................................................................................201.000.00-------1.00---------------------------------------
..................................................................................................................................................................................................................ACAGGGAGGGCAAGGCAGGGAGCCAGGACTG.........3111.001.00---------------1.00-------------------------------
........................................................GGCCCTGGGCCTATCCCAGA..............................................................................................................................................................................201.000.001.00----------------------------------------------
..............................CAGAGTGGCCTGTCTCCT..........................................................................................................................................................................................................1811.001.00-------------------1.00---------------------------
...................................TGGCCTGTCTCCTGAGTATGTGGCCGGGC..........................................................................................................................................................................................291.000.00-----------------------------------1.00-----------
.........................................................GCCCTGGGCCTATCCTATG..............................................................................................................................................................................191.000.001.00----------------------------------------------
........................................................GGCCCTGGGCCTATCCTAA...............................................................................................................................................................................191.000.001.00----------------------------------------------
.......................................................................................................................................................................................GTGTGCAAGGAAGAGAGCA................................................191.000.00--1.00--------------------------------------------
..ACCTGGACCCCGCGGAAACA....................................................................................................................................................................................................................................201.000.00--------------------------------------1.00--------
...................................................................................................................................................................................................GAGTGGGCTGACGAAACAGGGAGG...............................2411.001.00-----------1.00-----------------------------------
.........................................................GCCCTGGGCCTATCCTA................................................................................................................................................................................171.000.00------------1.00----------------------------------
........................................................GGCCCTGGGCCTATCCTAAA..............................................................................................................................................................................201.000.001.00----------------------------------------------
........................................................GGCCCTGGGCCTATCCTAGC..............................................................................................................................................................................201.000.00-----1.00-----------------------------------------
.............................CCAGAGTGGCCTGTCTCCT..........................................................................................................................................................................................................1911.001.00-------------------1.00---------------------------
........................................................GGCCCTGGGCCTATCCTCGA..............................................................................................................................................................................201.000.001.00----------------------------------------------
........................................................GGCCCTGGGCCTATCCTTGT..............................................................................................................................................................................201.000.00----------------------------------------1.00------
.........................................................GCCCTGGGCCTATCCTCGA..............................................................................................................................................................................191.000.00-------------1.00---------------------------------
........................................................................................................................................................................................TGTGCAAGGAAGAGTGGGCTGA............................................2211.001.00------------------------1.00----------------------
........................................................GGCCCTGGGCCTATCCAAGA..............................................................................................................................................................................201.000.001.00----------------------------------------------
........................................................GGCCCTGGGCCTATCCTTGG..............................................................................................................................................................................201.000.00---1.00-------------------------------------------

Antisense strand
GTACCTGGACCCCGCGGATGCTGCTGACCCCAGAGTGGCCTGTCTCCTGAGTATGTGGCCCTGGGCCTATCCCCTCCCCTGCTGCCTGATGCGGGCATGCCCCATGACAAGGGGCATTTACAAGGGCTAGATTCATTTAGACGTCCATCGAACGAACACTTATGAACACCTGCTATGCGCCAGGTGTGCAAGGAAGAGTGGGCTGACGAAACAGGGAGGGCAAGGCAGGGAGCCAGGACTGTGGCCTAAT
....................................................((.((((((((((......)))...(((((........))))).(((((((.......))))))).....))))))).))........((.(((.((....)).......((.((((((((.....)).)))))).)).)))...))...................................................
..................................................51...................................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR037937(GSM510475)
293cand2. (cell line)		SRR040036(GSM532921)
G243N. (cervix)		TAX577453(Rovira)
total RNA. (breast)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577580(Rovira)
total RNA. (breast)		GSE20417(GSM514985)
Colon and lung cancer pool. 		TAX577739(Rovira)
total RNA. (breast)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR040040(GSM532925)
G612N. (cervix)		SRR037935(GSM510473)
293cand3. (cell line)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577744(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		TAX577745(Rovira)
total RNA. (breast)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR191633(GSM715743)
85genomic small RNA (size selected RNA from t. (breast)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR191581(GSM715691)
104genomic small RNA (size selected RNA from . (breast)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)		TAX577741(Rovira)
total RNA. (breast)		SRR040039(GSM532924)
G531T. (cervix)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577590(Rovira)
total RNA. (breast)		TAX577742(Rovira)
total RNA. (breast)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR343335TAX577579(Rovira)
total RNA. (breast)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577589(Rovira)
total RNA. (breast)		SRR191625(GSM715735)
32genomic small RNA (size selected RNA from t. (breast)		TAX577738(Rovira)
total RNA. (breast)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		TAX577743(Rovira)
total RNA. (breast)
................................................................................GCTGCCTGATGCGGGGA......................................................................................................................................................... 171.000.00--------------------1.00--------------------------
..............................................................CATCAGGCAGCAGGGGAGGGGATAGGCCC............................................................................................................................................................... 2911.001.00-----------------------------------------1.00-----
.......................................................................................................................................................................................GTGTGCAAGGAAGAGATG................................................. 181.000.00---------------------------------------1.00-------
....................CTGCTGACCCCAGAGTTCTG.................................................................................................................................................................................................................. 201.000.00---------------1.00-------------------------------
....................................................................................................................................................................................................................CTCCCTGCCTTGCCCTCCCT.................. 2020.500.50----0.50------------------------------------------