ID: uc009zwc.2_intron_46_0_chr12_112681814_r.3p
GENE: (22)
chr12:112681764-112682013-


(1)
B-CELL
(4)
BREAST
(6)
CELL-LINE
(1)
OTHER
(2)
SKIN

Sense strand
TTTAAGTTAAAATAATTTTTAACCTAATACTTAGGTTAAAAAATTGATGTAAAAACCATCAGTATGCTGTGCTAGCTAGATTGGTGGCTGAACTGTGATAGAAAGCAAAGATACACTTAGACTGTTGGGTAGTTCTGTGTTGCATTTGGCTGTTGTACAGATAGCAGAAATGTCAGCCTTTTTATTCCTTTTTTTTCTAGCTTGTAAATCAGCTTCTGAAACAAAAGTGATATCTCACGCTGTCAGGCAG
................................................................................................................(((.(((((.....(((.........(((((((((.((((((.....))))))..))))).)))).........)))......)))))..))).............................................
................................................................................................................113...........................................................................................207.........................................
SizePerfect hitTotal NormPerfect NormSRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189784SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
TAX577589(Rovira)
total RNA. (breast)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
TAX577743(Rovira)
total RNA. (breast)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
......................................................................................................................................................................................TATTCCTTTTTTTTCTAAATG...............................................2126.000.0016.007.001.001.00-1.00--------
.......................................................................................................................................................................................ATTCCTTTTTTTTCTAAATG...............................................2014.000.004.006.001.002.00-1.00--------
..................................................................................................................................................................................TTTTTATTCCTTTTTTTGGTT...................................................216.000.00--6.00-----------
...................................................................................................................................................................................TTTTATTCCTTTTTTTGGTT...................................................203.000.00--3.00-----------
.....................................................................................................................TAGACTGTTGGGTAGTTT...................................................................................................................182.000.00----2.00---------
....................................................................................................................................................................................TTTATTCCTTTTTTTTCTTTG.................................................211.000.00-1.00------------
....................................................................................................................................................................................TTTATTCCTTTTTTTTCTTCG.................................................211.000.00---1.00----------
....................................................................................................................................................................CAGAAATGTCAGCCTTTTTATTCCTTCCAG........................................................301.000.001.00-------------
...................................................................................................................................................................................TTTTATTCCTTTTTTTCCG....................................................191.000.001.00-------------
....................................................................................................................................................................................TTTATTCCTTTTTTTTGGGG..................................................201.000.00--1.00-----------
......................................................................................................................................................................................TATTCCTTTTTTTTCTAACTG...............................................211.000.001.00-------------
......................................................................................................................................................................................TATTCCTTTTTTTTCTACATG...............................................211.000.00---1.00----------
......................................................................................................................................................................................TATTCCTTTTTTTTCTAAACG...............................................211.000.00---1.00----------
....................................................................................................................................................................................TTTATTCCTTTTTTTTCTTCT.................................................211.000.00-1.00------------
..............................................................................................................................................................................................................................AAAAGTGATATCTCACGCTGTCAG....2411.001.00--------1.00-----
....................................................................................................................................................................................................................CTTCTGAAACAAAAGTG.....................1711.001.00-------1.00------
.................................................................................................................................................................................CTTTTTATTCCTTTTTGTT......................................................191.000.001.00-------------
.......................................................................................................................................................................................ATTCCTTTTTTTTCTAATTC...............................................201.000.00--1.00-----------
......................................................................................................................................................................................TATTCCTTTTTTTTCTAAAAG...............................................211.000.001.00-------------
.....................................................................................................................................................................................TTATTCCTTTTTTTTCTTTG.................................................201.000.00-1.00------------
...................................................................................................................................................................................TTTTATTCCTTTTTTTTCTTTAA................................................231.000.00------------1.00-
......................................................................................................................................................................................................................................TATCTCACGCTGTCAG....1620.500.50-------------0.50

Antisense strand
TTTAAGTTAAAATAATTTTTAACCTAATACTTAGGTTAAAAAATTGATGTAAAAACCATCAGTATGCTGTGCTAGCTAGATTGGTGGCTGAACTGTGATAGAAAGCAAAGATACACTTAGACTGTTGGGTAGTTCTGTGTTGCATTTGGCTGTTGTACAGATAGCAGAAATGTCAGCCTTTTTATTCCTTTTTTTTCTAGCTTGTAAATCAGCTTCTGAAACAAAAGTGATATCTCACGCTGTCAGGCAG
................................................................................................................(((.(((((.....(((.........(((((((((.((((((.....))))))..))))).)))).........)))......)))))..))).............................................
................................................................................................................113...........................................................................................207.........................................
SizePerfect hitTotal NormPerfect NormSRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189784SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
TAX577589(Rovira)
total RNA. (breast)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
TAX577743(Rovira)
total RNA. (breast)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
.............................................................................................................................................................................................TTTTTTTCTAGCTTGCACA.......................................... 192.000.00---------1.00-1.00--
................................AGGTTAAAAAATTGATAT........................................................................................................................................................................................................ 181.000.001.00-------------
.....................................................AACCATCAGTATGCTAG.................................................................................................................................................................................... 171.000.00----------1.00---
.................................................................................................................................TAGTTCTGTGTTGCATTCG...................................................................................................... 191.000.00------1.00-------