ID: uc009zwc.2_intron_22_0_chr12_112641577_r.3p
GENE: (46)
chr12:112641527-112641776-


(8)
CELL-LINE
(1)
CERVIX
(1)
HEART
(1)
HELA
(2)
OTHER
(3)
SKIN

Sense strand
TTATATTACCTTCCAGACTGAGTTGTGTTCTTGCTTGGTTATAACAAAACTGAGGGTTCTGTTAAAGCCCGTAGAGCTATTTTATTTTATTTTATTTTATTATTTTATGTTTATCTGGAGAGCTATTTTAGATGCTAAATGTAAGAACCCAGATGCAGTGGTACTTTTTCCTGAAAAACTTCTCCCTCTACACTCCTCAGGTCTCACAGTAGTAACCCGCTCTCCAGACAGCAATAATGTAGCCAGCAGT
..........................................................................((((.(((((...............................)))))))))..............................................................................................................................
.......................................................................72.....................................................127.........................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)
SRR189782SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR444070(SRX128918)
Sample 27_4cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
GSM532874(GSM532874)
G699T. (cervix)
SRR037937(GSM510475)
293cand2. (cell line)
SRR189785SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
.................................................................................................................................AGATGCTAAATGTAAGAACCCAGATGCAGTGGTACTTTTTCCTGAAAAACTTCTCCCTCTACACTCCTCAG..................................................7117.007.00-----7.00----------
...................................................................................ATTTTATTTTATTTTATTATTTTCCTC............................................................................................................................................274.000.00-4.00--------------
........................................................................................................TTATGTTTATCTGGATCTC...............................................................................................................................194.000.00---------4.00------
.....................................................................................TTTATTTTATTTTATTATTTTCCTC............................................................................................................................................254.000.00-4.00--------------
..............................................................................ATTTTATTTTATTTTATTTTATTATCG.................................................................................................................................................273.000.002.00-1.00-------------
............................................................................CTATTTTATTTTATTTTATTTTATTATTG.................................................................................................................................................293.000.001.00-1.001.00------------
..................................................................................TATTTTATTTTATTTTATTATCG.................................................................................................................................................233.000.001.00-2.00-------------
............................................................................CTATTTTATTTTATTTTATTTTAATG....................................................................................................................................................262.000.001.001.00--------------
...............................................................................TTTTATTTTATTTTATTTTATTATTTCAG..............................................................................................................................................292.000.00---2.00------------
............................................................................CTATTTTATTTTATTTTATCG.........................................................................................................................................................212.000.001.00---1.00-----------
............................................................................CTATTTTATTTTATTTTATTTTATCTG...................................................................................................................................................272.000.00--1.001.00------------
............................................................................CTATTTTATTTTATTTTATTTTATTAAG..................................................................................................................................................282.000.00--2.00-------------
...............................................................................TTTTATTTTATTTTATTTTATTATTTTCTTG............................................................................................................................................312.000.00---2.00------------
..................................................................................TATTTTATTTTATTTTATTATTTATG..............................................................................................................................................262.000.00----2.00-----------
............................................................................CTATTTTATTTTATTTTATTTTATCG....................................................................................................................................................262.000.00--1.001.00------------
........................................................................AGAGCTATTTTATTTTATTTTATTTTA.......................................................................................................................................................2712.002.00-2.00--------------
............................................................................CTATTTTATTTTATTTTATTTATG......................................................................................................................................................242.000.002.00---------------
............................................................................CTATTTTATTTTATTTTATTTTATTATTTCATG.............................................................................................................................................332.000.00---1.00---1.00--------
...................................................................................ATTTTATTTTATTTTATTATCG.................................................................................................................................................222.000.001.00-1.00-------------
............................................................................CTATTTTATTTTATTTTATTTCTTG.....................................................................................................................................................252.000.00----2.00-----------
..................................................................................TATTTTATTTTATTTTATTATTTTAATTG...........................................................................................................................................292.000.002.00---------------
............................................................................CTATTTTATTTTATTTTATTTTATTACG..................................................................................................................................................282.000.001.00-1.00-------------
............................................................................CTATTTTATTTTATTTTATTTTCTTG....................................................................................................................................................262.000.001.00-1.00-------------
.................................................................................TTATTTTATTTTATTTTATTATCG.................................................................................................................................................242.000.00--1.001.00------------
............................................................................CTATTTTATTTTATTTTATTATTG......................................................................................................................................................242.000.00--1.001.00------------
.............................................................................TATTTTATTTTATTTTATTTTATTATTTTATG.............................................................................................................................................3221.501.501.00---0.50-----------
...............................................................................................TTTATTATTTTATGTTTATCTGGAG..................................................................................................................................2511.001.00--------1.00-------
......................TTGTGTTCTTGCTTGCTTA.................................................................................................................................................................................................................191.000.00-------------1.00--
...............................................................................TTTTATTTTATTTTATTTTATTATTTATG..............................................................................................................................................291.000.001.00---------------
..............................................................................ATTTTATTTTATTTTATTTTATTATCTAG...............................................................................................................................................291.000.00----1.00-----------
..............................................................................ATTTTATTTTATTTTATTTTATTACCAG................................................................................................................................................281.000.00---1.00------------
..................................................................................TATTTTATTTTATTTTATTATTCG................................................................................................................................................241.000.00--1.00-------------
...............................................................................TTTTATTTTATTTTATTTTATTATTTTACTG............................................................................................................................................311.000.00---1.00------------
............................................................................CTATTTTATTTTATTTTATTTATC......................................................................................................................................................241.000.00-1.00--------------
.............................................................................TATTTTATTTTATTTTATTTTATTATCG.................................................................................................................................................281.000.00--1.00-------------
............................................................................CTATTTTATTTTATTTTATTTTACTTC...................................................................................................................................................271.000.00-1.00--------------
.........................................................................................TTTTATTTTATTATTCTAG..............................................................................................................................................191.000.00---1.00------------
...............................................................................TTTTATTTTATTTTATTTTATTATTTTCATT............................................................................................................................................311.000.001.00---------------
............................................................................CTATTTTATTTTATTTTATTTTATTATTATG...............................................................................................................................................311.000.001.00---------------
...................................................................................ATTTTATTTTATTTTATTATTTTATG.............................................................................................................................................2631.001.001.00---------------
........................................................................................ATTTTATTTTATTATTTTATCG............................................................................................................................................221.000.001.00---------------
.............................................................................TATTTTATTTTATTTTATTTTATTATTTATG..............................................................................................................................................311.000.00--1.00-------------
...............................................................................TTTTATTTTATTTTATTTTATTACATC................................................................................................................................................271.000.00--------1.00-------
................................................................................TTTATTTTATTTTATTTTATTATACA................................................................................................................................................261.000.00----1.00-----------
..........................................................................................TTTATTTTATTATTTTATCG............................................................................................................................................201.000.00--1.00-------------
................................................................................TTTATTTTATTTTATTTTATTATTTTATCTTA..........................................................................................................................................321.000.001.00---------------
............................................................................CTATTTTATTTTATTTTATTTTATTATTTC................................................................................................................................................301.000.00--------1.00-------
........................................................................................ATTTTATTTTATTATTTTATGTTTATCTGG....................................................................................................................................3011.001.00-1.00--------------
...................................................................................ATTTTATTTTATTTTATTATAAG................................................................................................................................................231.000.00--1.00-------------
............................................................................CTATTTTATTTTATTTTATTTTATTCG...................................................................................................................................................271.000.00--1.00-------------
............................................................................CTATTTTATTTTATTTTATTTTATTATA..................................................................................................................................................281.000.001.00---------------
................................................................................TTTATTTTATTTTATTTTATTATTTTCTTG............................................................................................................................................301.000.00----1.00-----------
...................................................................................ATTTTATTTTATTTTATTATTCACG..............................................................................................................................................251.000.00---1.00------------
.........................................................................................TTTTATTTTATTATTTTATCTCA..........................................................................................................................................231.000.00----1.00-----------
............................................................................CTATTTTATTTTATTTTATTATAG......................................................................................................................................................241.000.001.00---------------
................................................................................TTTATTTTATTTTATTTTATTATTTCAG..............................................................................................................................................281.000.00--1.00-------------
..............................................................................ATTTTATTTTATTTTATTTTATTATTTTCTAG............................................................................................................................................321.000.00---1.00------------
............................................................................CTATTTTATTTTATTTTATTTTATTATTATC...............................................................................................................................................311.000.001.00---------------
..............................................................................ATTTTATTTTATTTTATTTTATTACGT.................................................................................................................................................271.000.00-1.00--------------
.................................................................................TTATTTTATTTTATTTTATTATATC................................................................................................................................................251.000.00-1.00--------------
............................................................................CTATTTTATTTTATTTTATTTTCAG.....................................................................................................................................................251.000.001.00---------------
............................................................................CTATTTTATTTTATTTTATTTTATC.....................................................................................................................................................251.000.00-1.00--------------
............................................................................CTATTTTATTTTATTTTATTTTACG.....................................................................................................................................................251.000.00---1.00------------
............................................................................CTATTTTATTTTATTTTACG..........................................................................................................................................................201.000.00----1.00-----------
.................................................................................TTATTTTATTTTATTTTATTATTTTATCG............................................................................................................................................291.000.00--1.00-------------
............................................CAAAACTGAGGGTTCTTTTG..........................................................................................................................................................................................201.000.00------1.00---------
..............................................................................ATTTTATTTTATTTTATTTTATTATGTCA...............................................................................................................................................291.000.00--------1.00-------
..................................................................................TATTTTATTTTATTTTATTATTTCAG..............................................................................................................................................261.000.00--1.00-------------
...................................................................................ATTTTATTTTATTTTATTATTTTCAC.............................................................................................................................................261.000.00-1.00--------------
.............................................................................TATTTTATTTTATTTTATTTTATTATTCG................................................................................................................................................291.000.00---1.00------------
..........................................................................................................................................................................................................CTCACAGTAGTAACCCGCTCTCCAGACAG...................2911.001.00--------------1.00-
..............................................................................ATTTTATTTTATTTTATTTTATTATTTAG...............................................................................................................................................291.000.00----1.00-----------
............................................................................CTATTTTATTTTATTTTATTTAA.......................................................................................................................................................231.000.00--1.00-------------
...................................................................................ATTTTATTTTATTTTATTATTTTACTTA...........................................................................................................................................281.000.00-1.00--------------
................................................................................TTTATTTTATTTTATTTTATTATTTATC..............................................................................................................................................281.000.00-1.00--------------
...................................................................................ATTTTATTTTATTTTATTATTTTATCATT..........................................................................................................................................291.000.00-1.00--------------
....................................................................................TTTTATTTTATTTTATTATTTTATCTA...........................................................................................................................................271.000.00-------1.00--------
.........................................................................................TTTTATTTTATTATTTTATGTTTATCTGG....................................................................................................................................2911.001.00-1.00--------------
...............................................................AAAGCCCGTAGAGCTA...........................................................................................................................................................................1611.001.00-------1.00--------
.......................................................................TAGAGCTATTTTATTTTATTTAA............................................................................................................................................................231.000.00-------1.00--------
...............................................................................TTTTATTTTATTTTATTTTATTAAGG.................................................................................................................................................261.000.001.00---------------
............................................................................CTATTTTATTTTATTTTATTTAGGA.....................................................................................................................................................251.000.00-1.00--------------
.....................................................................................................ATTTTATGTTTATCTGGAGAGCTATTTTAGA......................................................................................................................3111.001.00----------1.00-----
..............................................................................ATTTTATTTTATTTTATTTTATTATTTCAG..............................................................................................................................................301.000.001.00---------------
..............................................................................ATTTTATTTTATTTTATTTTATTATCTA................................................................................................................................................281.000.00-1.00--------------
............................................................................CTATTTTATTTTATTTTATTTATAG.....................................................................................................................................................251.000.001.00---------------
...................................................................CCCGTAGAGCTATTTTA......................................................................................................................................................................1720.500.50-------0.50--------
..........................................................................AGCTATTTTATTTTATTTTATTTTATTA....................................................................................................................................................2820.500.50-0.50--------------
.......................................................................TAGAGCTATTTTATTTTATTTTA............................................................................................................................................................2320.500.50-------0.50--------
............................................................................CTATTTTATTTTATTTTATTTTATTATTTTATA.............................................................................................................................................3340.500.25--0.250.25------------
..........................................................................AGCTATTTTATTTTATTTTATTTTATTATTTT................................................................................................................................................3220.500.50-0.50--------------
...................................................................................ATTTTATTTTATTTTATTATTTTATGTT...........................................................................................................................................2830.330.33-0.33--------------
....................................................................................TTTTATTTTATTTTATTATTTTATG.............................................................................................................................................2540.250.250.25---------------
............................................................................CTATTTTATTTTATTTTATTTTATTATTTTAT..............................................................................................................................................3240.250.250.25---------------
.......................................................................TAGAGCTATTTTATTTTA.................................................................................................................................................................1840.250.25-------0.25--------

Antisense strand
TTATATTACCTTCCAGACTGAGTTGTGTTCTTGCTTGGTTATAACAAAACTGAGGGTTCTGTTAAAGCCCGTAGAGCTATTTTATTTTATTTTATTTTATTATTTTATGTTTATCTGGAGAGCTATTTTAGATGCTAAATGTAAGAACCCAGATGCAGTGGTACTTTTTCCTGAAAAACTTCTCCCTCTACACTCCTCAGGTCTCACAGTAGTAACCCGCTCTCCAGACAGCAATAATGTAGCCAGCAGT
..........................................................................((((.(((((...............................)))))))))..............................................................................................................................
.......................................................................72.....................................................127.........................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)
SRR189782SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR444070(SRX128918)
Sample 27_4cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
GSM532874(GSM532874)
G699T. (cervix)
SRR037937(GSM510475)
293cand2. (cell line)
SRR189785SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
.............................................................................................................................................................................AAAAACTTCTCCCTCATAG.......................................................... 193.000.00------3.00---------
.........................................................................................TTTTATTTTATTATTTTAGAAA........................................................................................................................................... 221.000.00------------1.00---
.............................................................................................................................................................................AAAAACTTCTCCCTCAAAG.......................................................... 191.000.00------1.00---------
.............................................................................................................................................................................AAAAACTTCTCCCTCACAG.......................................................... 191.000.00------1.00---------
...........................................................................................................................................................................TGAAAAACTTCTCCCTCTCT........................................................... 201.000.00-----------1.00----
........................................................................................................................................................................................CCTCTACACTCCTCATCTG............................................... 191.000.00---------------1.00