ID: uc009ztu.1_intron_8_0_chr12_100613925_f.3p
GENE: (9)
chr12:100635311-100635560+


(1)
B-CELL
(3)
BRAIN
(6)
BREAST
(17)
CELL-LINE
(8)
CERVIX
(3)
HEART
(1)
HELA
(1)
LIVER
(1)
OTHER
(6)
SKIN
(1)
TESTES
(1)
UTERUS

Sense strand
TACAAAATAAAAATAAAAAATAAAACACTTAAAATCCTTTGAGATTATGCTTTCTCTGAAGTGTAAGTATGGCAATTTGAGAAAACCACCAGAGAATTGTTTATATTTACAAATTGTAGTTTCTTGTATCAGAAATGTTAATTCAAAGCTTCTGGATGGTGTTTTTGAAATTCCTTAATTAATTTCTTTTTTCGTTTCAGAGAGATGCTGGGGTTACTATTAATCTCAAGAGCCAACTGGTGTAGATACT
....................................................................................((((((((((..((((........))))......((((((......)))))).............)))))).))))..........................................................................................
....................................................................................85............................................................................................179.....................................................................
SizePerfect hitTotal NormPerfect NormSRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR037937(GSM510475)
293cand2. (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
TAX577745(Rovira)
total RNA. (breast)
SRR029124(GSM416753)
HeLa. (hela)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR040042(GSM532927)
G428N. (cervix)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189784SRR037936(GSM510474)
293cand1. (cell line)
SRR040011(GSM532896)
G529T. (cervix)
SRR040039(GSM532924)
G531T. (cervix)
SRR029127(GSM416756)
A549. (cell line)
SRR037938(GSM510476)
293Red. (cell line)
SRR029132(GSM416761)
MB-MDA231. (cell line)
SRR040025(GSM532910)
G613T. (cervix)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
TAX577580(Rovira)
total RNA. (breast)
SRR037935(GSM510473)
293cand3. (cell line)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR040016(GSM532901)
G645N. (cervix)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR040031(GSM532916)
G013T. (cervix)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR038861(GSM458544)
MM466. (cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577742(Rovira)
total RNA. (breast)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553576(SRX182782)
source: Testis. (testes)
SRR040032(GSM532917)
G603N. (cervix)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
TAX577738(Rovira)
total RNA. (breast)
SRR029125(GSM416754)
U2OS. (cell line)
TAX577588(Rovira)
total RNA. (breast)
SRR040029(GSM532914)
G026T. (cervix)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577743(Rovira)
total RNA. (breast)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
.........................................................................................CAGAGAATTGTTTATATTAGA............................................................................................................................................21235.003.009.006.00--4.00-----2.00--2.002.002.00---1.001.00--1.00------1.001.001.00--1.00--1.00----------
.........................................................................................CAGAGAATTGTTTATATTAG.............................................................................................................................................2025.003.00---1.00-------1.001.00-----1.00---------------1.00--------------
.........................................................................................CAGAGAATTGTTTATAT................................................................................................................................................1733.673.67---2.33-----------------------------------0.67--0.330.33-----
...........................................................................................GAGAATTGTTTATATTAG.............................................................................................................................................183.000.00--3.00----------------------------------------------
.........................................................................................CAGAGAATTGTTTATATT...............................................................................................................................................1823.003.00-------0.50--------0.50--------1.00--------------0.500.50-------
........................................................................................CCAGAGAATTGTTTAAATT...............................................................................................................................................193.000.00-----1.00------1.00--------------1.00---------------------
........................................................................................CCAGAGAATTGTTTAAAT................................................................................................................................................183.000.00-----2.00---------------1.00---------------------------
.........................................................................................CAGAGAATTGTTTATATTAT.............................................................................................................................................2023.003.00-------2.00--------1.00--------------------------------
...........................................................................................GAGAATTGTTTATATTAGA............................................................................................................................................192.000.00--2.00----------------------------------------------
.........................................................................................CAGAGAATTGTTTATATTAGAA...........................................................................................................................................2222.003.00-----------1.00-----1.00-------------------------------
.........................................................................................CAGAGAATTGTTTATATTAGT............................................................................................................................................2121.003.00-----------------------------1.00-------------------
............................................................................................................................................................TGGTGTTTTTGAAATTGAA...........................................................................191.000.00-1.00-----------------------------------------------
.........................................................................................CAGAGAATTGTTTATTGC...............................................................................................................................................181.000.00---1.00---------------------------------------------
.........................................................................................CAGAGAATTGTTTATATTAGCA...........................................................................................................................................2221.003.00-1.00-----------------------------------------------
.........................................................................................CAGAGAATTGTTTATA.................................................................................................................................................1670.430.43--------------------------------------------0.140.14-0.14-
.........................................................................................CAGAGAATTGTTTATAAA...............................................................................................................................................1870.140.43-----------------0.14-------------------------------
.........................................................................................CAGAGAATTGTTTATACCA..............................................................................................................................................1970.140.43----------------------------------------------0.14--
.......................................................................................................................................................................................................................ACTATTAATCTCAAG....................1590.110.11------------------------------------------------0.11

Antisense strand
TACAAAATAAAAATAAAAAATAAAACACTTAAAATCCTTTGAGATTATGCTTTCTCTGAAGTGTAAGTATGGCAATTTGAGAAAACCACCAGAGAATTGTTTATATTTACAAATTGTAGTTTCTTGTATCAGAAATGTTAATTCAAAGCTTCTGGATGGTGTTTTTGAAATTCCTTAATTAATTTCTTTTTTCGTTTCAGAGAGATGCTGGGGTTACTATTAATCTCAAGAGCCAACTGGTGTAGATACT
....................................................................................((((((((((..((((........))))......((((((......)))))).............)))))).))))..........................................................................................
....................................................................................85............................................................................................179.....................................................................
SizePerfect hitTotal NormPerfect NormSRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR037937(GSM510475)
293cand2. (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
TAX577745(Rovira)
total RNA. (breast)
SRR029124(GSM416753)
HeLa. (hela)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR040042(GSM532927)
G428N. (cervix)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189784SRR037936(GSM510474)
293cand1. (cell line)
SRR040011(GSM532896)
G529T. (cervix)
SRR040039(GSM532924)
G531T. (cervix)
SRR029127(GSM416756)
A549. (cell line)
SRR037938(GSM510476)
293Red. (cell line)
SRR029132(GSM416761)
MB-MDA231. (cell line)
SRR040025(GSM532910)
G613T. (cervix)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
TAX577580(Rovira)
total RNA. (breast)
SRR037935(GSM510473)
293cand3. (cell line)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR040016(GSM532901)
G645N. (cervix)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR040031(GSM532916)
G013T. (cervix)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR038861(GSM458544)
MM466. (cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577742(Rovira)
total RNA. (breast)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553576(SRX182782)
source: Testis. (testes)
SRR040032(GSM532917)
G603N. (cervix)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
TAX577738(Rovira)
total RNA. (breast)
SRR029125(GSM416754)
U2OS. (cell line)
TAX577588(Rovira)
total RNA. (breast)
SRR040029(GSM532914)
G026T. (cervix)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577743(Rovira)
total RNA. (breast)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
...AAAATAAAAATAAAAAATAAAACTGG............................................................................................................................................................................................................................. 262.000.00------2.00------------------------------------------
..........................................................................................ACTACAATTTGTAAATATAAACAATTCTCT.................................................................................................................................. 3012.002.00---------2.00---------------------------------------
.................................................................................AAAACCACCAGAGAAGGGG...................................................................................................................................................... 191.000.00--------------------------1.00----------------------
...AAAATAAAAATAAAAAATAAAACGAG............................................................................................................................................................................................................................. 261.000.00------1.00------------------------------------------
...................................................................................................................................................AGGAATTTCAAAAACACCATCCAGAAGC........................................................................... 2811.001.00------------------------1.00------------------------
.............................................................................................................................................................................................................................AATCTCAAGAGCCAAGGGT.......... 191.000.00----------------------------1.00--------------------
..........................................................................................................................................ACCATCCAGAAGCTTTGAATTA.......................................................................................... 2211.001.00------------------------------------1.00------------
.........AAAATAAAAAATAAAACACTTAAAATCATT................................................................................................................................................................................................................... 301.000.00--------1.00----------------------------------------
........................................................................................................................................................................................TCTTTTTTCGTTTCAGTC................................................ 181.000.00----------------------1.00--------------------------
.......TAAAAATAAAAAATAAAACACTTAAAATCT..................................................................................................................................................................................................................... 301.000.00--------1.00----------------------------------------
.........................................................................................................................................................................ATTCCTTAATTAATTTGGTA............................................................. 201.000.00-------------------------------------1.00-----------
...................................................................................................................................................TTAAGGAATTTCAAAAACACCATCCAGAAGC........................................................................ 3111.001.00---------------------------------1.00---------------
..........AAGTGTTTTATTTTTTATTT............................................................................................................................................................................................................................ 2050.200.20--------0.20----------------------------------------