ID: uc009zrt.1_intron_6_0_chr12_71537994_r.3p
GENE: TSPAN8(1)
chr12:71537944-71538193-


(2)
BRAIN
(3)
CELL-LINE
(1)
HEART
(2)
HELA
(2)
OTHER
(4)
SKIN

Sense strand
AATTATTCTCATCAAACTTACACATTGCAATTTAACATTTCAACAATGATCTGTATATGAATATGCCTCATTTATGTCTTCCAGGTTGTGATAGTATAGTCGATGATGAACTACTGTCACCGGATAGATAGGAGGGTGTGGAAATAGAGTTTCATATGATCCTAATTGTATTCTTTTTGTTTGTTTGTTTTTTTCTGCAGCTATGTGGTATCTTGATCCTAGCATTAGCAATATGGGTACGAGTAAGCAA
........................................................................................................................((((((((((((((((.(((.((.(((..((......))..))).)).)))))))))))))))))))...............................................................
....................................................................................................................117................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189784SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189782DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
............................................................................................................................................................................CTTTTTGTTTGTTTGTTTTTTTTGGG....................................................268.000.005.003.00------------
..............................................................................................................................................................................TTTTGTTTGTTTGTTTTTTTCTGTTG..................................................267.000.006.001.00------------
...........................................................................................................................................................................TCTTTTTGTTTGTTTGTTTTTTTCGTG....................................................273.000.003.00-------------
.........................................................................................................................................................................ATTCTTTTTGTTTGTTTGTTTGGTT........................................................252.000.001.001.00------------
...........................................................................................................................................................................TCTTTTTGTTTGTTTGTTTTTTTATA.....................................................262.000.00-2.00------------
.....................................................TATATGAATATGCCTCATTTATGTCTT..........................................................................................................................................................................2712.002.00---2.00----------
............................................................................................................................................................TGATCCTAATTGTATTCTTTTTGTTTGTTTGTTTTTTTCTGCAGAA................................................462.000.00----2.00---------
.............................................................................................................................................................................TTTTTGTTTGTTTGTTTTTTTCTGTTG..................................................271.000.001.00-------------
.........................................................................................................................................................................ATTCTTTTTGTTTGTTTGTTCGCC.........................................................241.000.001.00-------------
.........................................................................................................................GGATAGATAGGAGGGTGTGGA............................................................................................................2111.001.00-----1.00--------
.......................................................................................................................................................................GTATTCTTTTTGTTTGTTTCGTT............................................................231.000.00--1.00-----------
...................................................................................................................................................................................................................CTTGATCCTAGCATTAGCAATATGG..............2511.001.00---------1.00----
...........................................................................................................................................................................TCTTTTTGTTTGTTTGTTCTGG.........................................................221.000.001.00-------------
............................................................................................................................................................................CTTTTTGTTTGTTTGTTTTTCTGC......................................................241.000.00-1.00------------
...........................................................................................................................................................................TCTTTTTGTTTGTTTGTTTTTATTG......................................................251.000.001.00-------------
........................................................................................................................................................................TATTCTTTTTGTTTGTTTGTTTCGAG........................................................261.000.00-1.00------------
..........................................................................................................................................................................TTCTTTTTGTTTGTTTGTTTTTTTTTAG....................................................281.000.00------------1.00-
........................................................................................................................................TGTGGAAATAGAGTTATAG...............................................................................................191.000.00-------1.00------
.........................................................................................................................................................................ATTCTTTTTGTTTGTTTGTAGAG..........................................................231.000.001.00-------------
...........................................................................................................................................................................TCTTTTTGTTTGTTTGTTTTTAGG.......................................................241.000.001.00-------------
..........................................................................................................................................................................TTCTTTTTGTTTGTTTGTTCGTG.........................................................231.000.00-1.00------------
..........................................................................................................................................................................TTCTTTTTGTTTGTTTGTTTTTTCG.......................................................251.000.001.00-------------
.................................................................................................................................................................................TGTTTGTTTGTTTTTTTCTATG...................................................221.000.001.00-------------
............................................................................................................................................................................CTTTTTGTTTGTTTGTTTTTTTCGAG....................................................261.000.001.00-------------
...........................................................................................................................................................................TCTTTTTGTTTGTTTGTTTTTTTGCT.....................................................261.000.00-1.00------------
............................................................................................................................................................................CTTTTTGTTTGTTTGTTTTTTTTTGT....................................................261.000.00-1.00------------
............................................................................................................................................................................CTTTTTGTTTGTTTGTTTTTCGG.......................................................231.000.00-1.00------------
............................................................................................................................................................................CTTTTTGTTTGTTTGTTTTCTGC.......................................................231.000.00-1.00------------
............................................................................................................................................................................CTTTTTGTTTGTTTGTTCTGG.........................................................211.000.001.00-------------
.............................................................................................................................................................................TTTTTGTTTGTTTGTTTTTTTCGCTT...................................................261.000.00-1.00------------
...........................................................................................................................................................................TCTTTTTGTTTGTTTGTTTTTCTC.......................................................241.000.00-1.00------------
.............................................................................................................................................................................TTTTTGTTTGTTTGTTTTTTTCGGG....................................................251.000.00-1.00------------
........................................................................................................................................................................TATTCTTTTTGTTTGGCTG...............................................................191.000.00-1.00------------
..........................................................................................................................................................................TTCTTTTTGTTTGTTTGTTTTAC.........................................................231.000.001.00-------------
...........................................................................................................................................................................TCTTTTTGTTTGTTTGTTTTTCACT......................................................251.000.00-1.00------------
.............................................................................................................................................................................TTTTTGTTTGTTTGTTTTTTTCACTC...................................................261.000.00-1.00------------
..........................................................................................................................................................................TTCTTTTTGTTTGTTTGTTTTTTTCG......................................................261.000.001.00-------------
.................................................................................................................................................................................TGTTTGTTTGTTTTTTTCTGTTG..................................................231.000.001.00-------------
..............................................................................................TATAGTCGATGATGAACTACTG......................................................................................................................................2211.001.00-----1.00--------
...........................................................................................................................................................................TCTTTTTGTTTGTTTGTTTTCTGG.......................................................241.000.001.00-------------
..........................................................................................................................................................................................................ATGTGGTATCTTGATCCTAGCATTAGCAAT..................3011.001.00------1.00-------
..............................................................................................................................................................................TTTTGTTTGTTTGTTTTTTTCTGTAG..................................................261.000.001.00-------------
...................................................................................................................................................................................TTTGTTTGTTTTTTTCTGC....................................................1930.330.33-0.33------------

Antisense strand
AATTATTCTCATCAAACTTACACATTGCAATTTAACATTTCAACAATGATCTGTATATGAATATGCCTCATTTATGTCTTCCAGGTTGTGATAGTATAGTCGATGATGAACTACTGTCACCGGATAGATAGGAGGGTGTGGAAATAGAGTTTCATATGATCCTAATTGTATTCTTTTTGTTTGTTTGTTTTTTTCTGCAGCTATGTGGTATCTTGATCCTAGCATTAGCAATATGGGTACGAGTAAGCAA
........................................................................................................................((((((((((((((((.(((.((.(((..((......))..))).)).)))))))))))))))))))...............................................................
....................................................................................................................117................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189784SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189782DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
.....................................................................................................................................................................TTGTATTCTTTTTGTAAAG.................................................................. 191.000.00--1.00-----------
.....................................................................................................................................................TTTCATATGATCCTATCGG.................................................................................. 191.000.00----------1.00---
................................................................ACTATCACAACCTGGAAGACATAAATGAGGC........................................................................................................................................................... 3111.001.00--------1.00-----
...........................CAATTTAACATTTCATGCT............................................................................................................................................................................................................ 191.000.00-----------1.00--
......................................................TGAGGCATATTCATAT.................................................................................................................................................................................... 1680.120.12-------------0.12