ID: uc009zno.1_intron_5_0_chr12_54769739_r.3p
GENE: ZNF385A(1)
chr12:54769689-54769938-


(1)
AGO1.ip 		(1)
AGO1.ip OTHER.mut 		(3)
AGO2.ip 		(2)
AGO3.ip 		(2)
B-CELL 		(10)
BRAIN 		(18)
BREAST 		(21)
CELL-LINE 		(2)
CERVIX 		(1)
FIBROBLAST 		(4)
HEART 		(3)
HELA 		(3)
LIVER 		(4)
OTHER 		(1)
RRP40.ip 		(41)
SKIN 		(1)
TESTES 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
GCCAGTTATCGATCAGGTCCCTTTCAGTGCTATGAAGATTGGGCTAAGAGAGAATCAGAAGACTGAGGCTCAGATCCCTCAGGCATATTAAGGGATAGAAGGGGTCTGGGGACCTTGGTTCAACACAGATATCTGTGTTGGGGGAATGCTGGACATGAGTTGCGCTAGGGTTCCCGGCTCACCCCAGCCTGCCTCCACAGATGGACCCTGTGCAGAAGGCTGTGCTCTCCCACACTTTTGGGGGACCCTT
.......................................................................................................................................((.((((((...(((((...(((((((.((....))...)))))))..)))))...))))))))...................................................
....................................................................................................................................133................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037935(GSM510473)
293cand3. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		TAX577453(Rovira)
total RNA. (breast)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR189782SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577742(Rovira)
total RNA. (breast)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577589(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		TAX577738(Rovira)
total RNA. (breast)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		TAX577745(Rovira)
total RNA. (breast)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553576(SRX182782)
source: Testis. (testes)		TAX577743(Rovira)
total RNA. (breast)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR343334SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		TAX577580(Rovira)
total RNA. (breast)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)		SRR191568(GSM715678)
51genomic small RNA (size selected RNA from t. (breast)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)		SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037943(GSM510481)
293DcrTN. (cell line)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM532874(GSM532874)
G699T. (cervix)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		TAX577740(Rovira)
total RNA. (breast)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR189785SRR040008(GSM532893)
G727N. (cervix)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)		TAX577590(Rovira)
total RNA. (breast)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR191595(GSM715705)
72genomic small RNA (size selected RNA from t. (breast)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR189786GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191428(GSM715538)
160genomic small RNA (size selected RNA from . (breast)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.........................................................................................................................................TTGGGGGAATGCTGGACATGAGT..........................................................................................23158.0058.009.00--1.00-4.00-2.00---3.003.00----1.002.00----1.002.00---1.001.001.00-2.002.00---2.002.00--1.001.00-----1.001.00-1.001.00----1.001.00-----1.001.00---1.00-1.00--1.00---1.00---------1.001.00----------1.001.00--1.00-----------
....................................................................................................................................................................................................................CAGAAGGCTGTGCTCTCCCA..................20111.0011.00--11.00-----------------------------------------------------------------------------------------------------------------
..........................................................................................................................................TGGGGGAATGCTGGACATGAGT..........................................................................................2218.008.00---------3.00-----3.00---------------------------------1.00--------------------------------------------1.00---------------------
...................................................................................................................................................................................................................................TCCCACACTTTTGGGGGTG....197.000.00----7.00---------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................CACCCCAGCCTGCCTCCACAGT.................................................227.000.00--------------2.00--------1.00------1.00-------------1.00--------1.00-----1.00--------------------------------------------------------
.........................................................................................................................................TTGGGGGAATGCTGGACATGAG...........................................................................................2217.007.00-------1.00------------------2.00----------------1.00--------------------------1.00-------------------1.00------------1.00------------
.........................................................................................................................................TTGGGGGAATGCTGGACATGA............................................................................................2114.004.00---------------------------------------1.00---1.00----1.00-----------------------1.00-------------------------------------------
................................................................................................................................................................................................................TGTGCAGAAGGCTGTGCTCT......................2014.004.00-1.00--------1.00------------------------1.001.00-------------------------------------------------------------------------------
...................................................................................................................................................................................................................GCAGAAGGCTGTGCTCTCCC...................2014.004.00-1.00------2.00-------------------------------------------------------------------------------------------------------1.00---
........................................................................................................................................................................................................ATGGACCCTGTGCAGAAGGCTGTG..........................2414.004.00---1.00-----------------------------------------2.00-------------------------------------------------------------1.00--------
.........................................................................................................................................TTGGGGGAATGCTGGACATG.............................................................................................2014.004.00------------------1.00--------------------------------------------------------1.00--------1.00------------1.00------------------
......................................................................................................................................GTGTTGGGGGAATGCTGGACATGA............................................................................................2414.004.00-----3.00----------------------------------------------------------------------1.00---------------------------------------
..........................................................................................................................................................................................................GGACCCTGTGCAGAAGGCTGTGCTCTC.....................2713.003.00--------------------2.00--------------1.00--------------------------------------------------------------------------------
..................................................................................................................................................................................................................TGCAGAAGGCTGTGCTCTCCC...................2113.003.00-1.00-2.00----------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................GTGCAGAAGGCTGTGCTCT......................1913.003.00-1.00-1.00-----------------1.00----------------------------------------------------------------------------------------------
.............................................................................CTCAGGCATATTAAGGGATAGAAGGGGTCT...............................................................................................................................................3013.003.00----------------3.00---------------------------------------------------------------------------------------------------
.........................................................................................................................................TTGGGGGAATGCTGGACATGAGA..........................................................................................2312.007.00--------------------------------------------------------------------1.00----------------------------------------1.00------
....................................................................................................................................................................................ACCCCAGCCTGCCTCCACAG..................................................2012.002.00------------------------------------------------------------------1.00---------------------------------------1.00---------
........................................................................................................................................GTTGGGGGAATGCTGGACATGAG...........................................................................................2312.002.00-------------2.00------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................GATGGACCCTGTGCAGAAGG...............................2012.002.00-------1.00-----------------------------------------------1.00------------------------------------------------------------
...............................................................................................................................................................................................................CTGTGCAGAAGGCTGTGCTCT......................2112.002.00---1.00-----------------------------------------------------------------------------------------------1.00----------------
.......................................................................................................................................TGTTGGGGGAATGCTGGACATGA............................................................................................2312.002.00-----------------------------1.00---------------------------------1.00----------------------------------------------------
................................................................................................................................................................................................................TGTGCAGAAGGCTGTGCTC.......................1912.002.00----------------------1.00---------------------------------------------------------------1.00-----------------------------
............................................................................................................................................................................................................ACCCTGTGCAGAAGGCTGTGCTCT......................2412.002.00------1.00-1.00-----------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................TCACCCCAGCCTGCCTCCACAG..................................................2212.002.00----------------------------------2.00---------------------------------------------------------------------------------
.......................................................................................................................................TGTTGGGGGAATGCTGGACAT..............................................................................................2112.002.00-------------------------1.00-1.00----------------------------------------------------------------------------------------
....................................................................................................................................................................................ACCCCAGCCTGCCTCCACAGT.................................................2112.002.00------------------------------------------------------------1.00-----------------------------------------------1.00-------
.................................................................................................................................................................................................................GTGCAGAAGGCTGTGCTCTCCC...................2212.002.00---1.00--1.00-------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................GCAGAAGGCTGTGCTCTC.....................1812.002.00---1.00--------------------------------1.00-------------------------------------------------------------------------------
.......................................................................................................................................TGTTGGGGGAATGCTGGAC................................................................................................1912.002.00----------------------------1.00---------------------------------------------------------------------------------1.00-----
.....................................................................................................................................................................................................................AGAAGGCTGTGCTCTCCC...................1821.501.50---------------------0.50-----------------------------------------------------------------------1.00----------------------
..........................................................................................AGGGATAGAAGGGGTGAA..............................................................................................................................................181.000.00------1.00-------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................ATGGACCCTGTGCAGAAG................................1811.001.00-1.00------------------------------------------------------------------------------------------------------------------
...............................................................TGAGGCTCAGATCCCTCCAG.......................................................................................................................................................................201.000.00-------------1.00------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................TGCAGAAGGCTGTGCTCTCACAC.................231.000.00-1.00------------------------------------------------------------------------------------------------------------------
......................................................................................................................................GTGTTGGGGGAATGCTGGACAT..............................................................................................2211.001.00-----------------------------------------------1.00--------------------------------------------------------------------
...................................................................................................................................................................................................................GCAGAAGGCTGTGCTCTCCCAC.................2211.001.00-1.00------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................CTGTGCAGAAGGCTGTGCTCTCCCA..................2511.001.00-1.00------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................CCCACACTTTTGGGGGTG....181.000.00-----------1.00--------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................GCAGAAGGCTGTGCTCT......................1711.001.00---1.00----------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................TGGACCCTGTGCAGAAGGCTGTGCTCTCC....................2911.001.001.00-------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................TCACCCCAGCCTGCCTCCACAGA.................................................2311.001.001.00-------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................ATGGACCCTGTGCAGAAGG...............................1911.001.00-----------------------------------------------------------------------------1.00--------------------------------------
.........................................................................................................................................TTGGGGGAATGCTGGACGAGT............................................................................................211.000.00--------------------------------------------------------------------------------------------------1.00-----------------
..........................................................................................................................................TGGGGGAATGCTGGACATG.............................................................................................1911.001.00------------------------------------------1.00-------------------------------------------------------------------------
........................................................................................................................................................................................................ATGGACCCTGTGCAGAAGGCTGAA..........................2411.001.00-1.00------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................TGCAGAAGGCTGTGCTCTCCCACAC...............2511.001.00----------1.00---------------------------------------------------------------------------------------------------------
..........................................................................................................................................TGGGGGAATGCTGGACATGAGTTG........................................................................................2411.001.00-------1.00------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................TGGACATGAGTTGCGCTAGGG................................................................................2111.001.00-------------------------------------------------------------1.00------------------------------------------------------
..........................................................................................................................................TGGGGGAATGCTGGACATGAG...........................................................................................2111.001.00-------------------------------1.00------------------------------------------------------------------------------------
..........................................................................................................................................................................................................GGACCCTGTGCAGAAGGCTGTGCTCTCCC...................2911.001.00---------1.00----------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................TCACCCCAGCCTGCCTCCACA...................................................2111.001.00---------------------------------------------------------------------------------------------------------1.00----------
..........................................................................................................................................................................................................GGACCCTGTGCAGAAGGCTGTT..........................221.000.00------1.00-------------------------------------------------------------------------------------------------------------
.......................................................................................................................................TGTTGGGGGAATGCTGGA.................................................................................................1811.001.001.00-------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................TGTTGGGGGAATGCTGGACATGAGT..........................................................................................2511.001.00----------------------------------------------1.00---------------------------------------------------------------------
.........................................................................................................................................................................................................TGGACCCTGTGCAGAAGGCTGT...........................2211.001.00------1.00-------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................AGAAGGCTGTGCTCTCCCAC.................2011.001.00--------------1.00-----------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................CTGTGCAGAAGGCTGTGCTCTC.....................2211.001.00-------------------------------------------------------------------------1.00------------------------------------------
........................................................................................................................................................................................................ATGGACCCTGTGCAGAAGGCTG............................2211.001.00-1.00------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................CAGAAGGCTGTGCTCTCCC...................1911.001.00-------------------------------------------------------------------1.00------------------------------------------------
........................................................................................................................................................................................................ATGGACCCTGTGCAGAAGGCT.............................2111.001.00-----------------------------------------1.00--------------------------------------------------------------------------
...........................................................................................................................................................................................................GACCCTGTGCAGAAGGCTGTGCTCTCCCACA................3111.001.001.00-------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................CGCTAGGGTTCCCGGCTTT.....................................................................191.000.00---------------------------------------------------------------------------------1.00----------------------------------
......................................................................................................................................................................................................................................CACACTTTTGGGGGACC...1711.001.00---------------------------1.00----------------------------------------------------------------------------------------
...................................................GAATCAGAAGACTGAGGGT....................................................................................................................................................................................1921.000.50-------------------------------------------------------------------------------1.00------------------------------------
...............................ATGAAGATTGGGCTAAGAGAGA.....................................................................................................................................................................................................2211.001.00------1.00-------------------------------------------------------------------------------------------------------------
.......................................................................................................................................TGTTGGGGGAATGCTGGACATGAAGT.........................................................................................2611.002.00----------------------------------------------1.00---------------------------------------------------------------------
................................................................................................................................................................................................................TGTGCAGAAGGCTGTGCTCTCCCACA................2611.001.00---1.00----------------------------------------------------------------------------------------------------------------
...................................................GAATCAGAAGACTGAAGGT....................................................................................................................................................................................191.000.00--------------------------------------------------1.00-----------------------------------------------------------------
....................................................................................................................................................................................ACCCCAGCCTGCCTCCACA...................................................1911.001.00-----------------------------------------------------------------------------------------------1.00--------------------
.......................................................................................................................................TGTTGGGGGAATGCTGGACA...............................................................................................2011.001.00------------------------------------------------------------------------------------------------1.00-------------------
.......................................................................................................................................TGTTGGGGGAATGCTGGACATGCT...........................................................................................241.000.00-1.00------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................TGGACCCTGTGCAGAAGGCTGTG..........................2311.001.00----------1.00---------------------------------------------------------------------------------------------------------
......................................................................................................................................GTGTTGGGGGAATGCTGGACT...............................................................................................2111.001.00-----------------1.00--------------------------------------------------------------------------------------------------
..........................................................................................................................................TGGGGGAATGCTGGACATGA............................................................................................2011.001.00-------------------------------1.00------------------------------------------------------------------------------------
....................................................AATCAGAAGACTGAGCCT....................................................................................................................................................................................181.000.00--------------------------------------------1.00-----------------------------------------------------------------------
....................................................................................................................................................................................................................CAGAAGGCTGTGCTCTCC....................1811.001.00-1.00------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................TGGACCCTGTGCAGAAGGCTGTGCTCTCCC...................3011.001.001.00-------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................TGTTGGGGGAATGCTGGACATGT............................................................................................231.000.00--------------------------------------------------------------------------------------------1.00-----------------------
........................................................................................................................................................................................................ATGGACCCTGTGCAGAAGGCTGTGCTCTCC....................3011.001.001.00-------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................GCAGAAGGCTGTGCTCTCCCACAC...............2411.001.00--------1.00-----------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................TCCCACACTTTTGGGGGGG....191.000.00----1.00---------------------------------------------------------------------------------------------------------------
.............................................................................CTCAGGCATATTAAGGGATAGAAGGGGT.................................................................................................................................................2811.001.00-------------------------1.00------------------------------------------------------------------------------------------
..................................................AGAATCAGAAGACTGTA.......................................................................................................................................................................................171.000.00------1.00-------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................ATGGACCCTGTGCAGAAGGCTGTGCTCT......................2811.001.001.00-------------------------------------------------------------------------------------------------------------------
......................................................................................................................................GTGTTGGGGGAATGCTGGAC................................................................................................2011.001.00---------1.00----------------------------------------------------------------------------------------------------------
.........................................................................................................................................TTGGGGGAATGCTGGCGGA..............................................................................................191.000.00-------------------------------------------------------------------------------------1.00------------------------------
....................................................................................................................................................................................................................CAGAAGGCTGTGCTCTCCCACA................2211.001.00---------------------------------------1.00----------------------------------------------------------------------------
..................................................................................................................................................................................................................TGCAGAAGGCTGTGCTCTCC....................2011.001.00----------------------1.00---------------------------------------------------------------------------------------------
........................................................................................................................................GTTGGGGGAATGCTGGACATGA............................................................................................2211.001.00---------------------------------------------------------------------------------------------------------------1.00----
........................................................................................................................................................................................................ATGGACCCTGTGCAGAAGGCTGTGCTCTCCC...................3111.001.00-----------------1.00--------------------------------------------------------------------------------------------------
.......................................................................................................................................TGTTGGGGGAATGCTGGACATGTTT..........................................................................................251.000.00---------------------------------------------------1.00----------------------------------------------------------------
.........................................................................................................................................................................................................TGGACCCTGTGCAGAAGGCT.............................2020.500.50-----------------------------------------------------0.50--------------------------------------------------------------
...................................................GAATCAGAAGACTGAGG......................................................................................................................................................................................1720.500.50------------------------------------------------------------------------------------------------------------------0.50-
.....................................................ATCAGAAGACTGAGGCT....................................................................................................................................................................................1730.330.33------------------------------------------------------0.33-------------------------------------------------------------
.......................................................................AGATCCCTCAGGCAT....................................................................................................................................................................1580.120.12-------------------------------------------------------------------------------------------------------------------0.12

Antisense strand
GCCAGTTATCGATCAGGTCCCTTTCAGTGCTATGAAGATTGGGCTAAGAGAGAATCAGAAGACTGAGGCTCAGATCCCTCAGGCATATTAAGGGATAGAAGGGGTCTGGGGACCTTGGTTCAACACAGATATCTGTGTTGGGGGAATGCTGGACATGAGTTGCGCTAGGGTTCCCGGCTCACCCCAGCCTGCCTCCACAGATGGACCCTGTGCAGAAGGCTGTGCTCTCCCACACTTTTGGGGGACCCTT
.......................................................................................................................................((.((((((...(((((...(((((((.((....))...)))))))..)))))...))))))))...................................................
....................................................................................................................................133................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037935(GSM510473)
293cand3. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		TAX577453(Rovira)
total RNA. (breast)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR189782SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577742(Rovira)
total RNA. (breast)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577589(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		TAX577738(Rovira)
total RNA. (breast)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		TAX577745(Rovira)
total RNA. (breast)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553576(SRX182782)
source: Testis. (testes)		TAX577743(Rovira)
total RNA. (breast)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR343334SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		TAX577580(Rovira)
total RNA. (breast)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)		SRR191568(GSM715678)
51genomic small RNA (size selected RNA from t. (breast)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)		SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037943(GSM510481)
293DcrTN. (cell line)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM532874(GSM532874)
G699T. (cervix)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		TAX577740(Rovira)
total RNA. (breast)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR189785SRR040008(GSM532893)
G727N. (cervix)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)		TAX577590(Rovira)
total RNA. (breast)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR191595(GSM715705)
72genomic small RNA (size selected RNA from t. (breast)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR189786GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191428(GSM715538)
160genomic small RNA (size selected RNA from . (breast)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
........................................................................................................................................................................................CAGCCTGCCTCCACATA................................................. 177.000.00-------------------2.00--------------------1.00------1.00--1.00-----------------------------1.00--1.00--------------------------------
........................................................................................................................................................................................CAGCCTGCCTCCACATC................................................. 175.000.00-1.00------1.00---------------------------------------------1.00-------1.00----------------------------1.00------------------------
......................................................................................ATTAAGGGATAGAAGCTAG................................................................................................................................................. 191.000.00--------------------------------------------------------1.00-----------------------------------------------------------
.....................................................................................................................................................................................................CAGATGGACCCTGTGCAACT................................. 201.000.00------------------------------------------------------------------------------------------------------1.00-------------
........................................................................................................................................................................................CAGCCTGCCTCCACATCAT............................................... 191.000.00---------------------1.00----------------------------------------------------------------------------------------------
........................................................................................................................................................................................CAGCCTGCCTCCACAACTG............................................... 191.000.00-------------------1.00------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................CAGATGGACCCTGTGCACT.................................. 191.000.00--------------------1.00-----------------------------------------------------------------------------------------------
........................................................................................................................................................................................CAGCCTGCCTCCACATTT................................................ 181.000.00----------------------------------------------------------------------------------1.00---------------------------------
.................................................................................................................................................................................................................................TCTCCCACACTTTTGGACCT..... 201.000.00---------------------------------------------------------------------------------------1.00----------------------------
........................................................................................................................................................................................CAGCCTGCCTCCACAAAAT............................................... 191.000.00----------1.00---------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................CAGCCTGCCTCCACAAA................................................. 171.000.00----------------------------------------1.00---------------------------------------------------------------------------
................................................................................................................TCTGTGTTGAACCAAGG......................................................................................................................... 1720.500.50----------------------------------------------------0.50---------------------------------------------------------------
..........................................................................................................................................................................................................CCTTCTGCACAGGGTCC............................... 1740.500.50-----------------------------------------------------------------------------------------------------------------0.50--