ID: uc009zmt.2_intron_13_0_chr12_53567920_r.3p
GENE: (1)
chr12:53567870-53568119-


(1)
AGO1.ip
(1)
AGO1.ip OTHER.mut
(5)
AGO2.ip
(1)
AGO3.ip
(4)
B-CELL
(5)
BRAIN
(1)
BREAST
(30)
CELL-LINE
(3)
CERVIX
(4)
HEART
(3)
HELA
(6)
LIVER
(1)
OTHER
(1)
RRP40.ip
(11)
SKIN
(1)
XRN.ip

Sense strand
ATTTTCTTTTTTTCTTTTTTTTTTTTTTGAGATGGAGTCTCGCTCTGTCGCCTAGGCTGGGGTGCAGTGGCGCGATCTCTGCTCACTGCAAGCTCTGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCAGAGTAGCTAGCTGGGACTACAGGGGCCCGCCACCACACCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCG
...........................................................................................((((((......(((((...((.........))...))))).))))))...((((((((......((((....)).))...))))))))......................................................................
.....................................................................................86.............................................................................................181...................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)
SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)
SRR390723(GSM850202)
total small RNA. (cell line)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR189786SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR390724(GSM850203)
small rna immunoprecipitated. (cell line)
GSM532876(GSM532876)
G547T. (cervix)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR189787GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040028(GSM532913)
G026N. (cervix)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR390725(GSM850204)
small rna immunoprecipitated. (cell line)
SRR189782GSM956925PazD5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR040008(GSM532893)
G727N. (cervix)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577743(Rovira)
total RNA. (breast)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
....TCTTTTTTTCTTTTTTTTTTTTTCAAG...........................................................................................................................................................................................................................2757.000.00--33.0024.00-------------------------------------------------------------------
.....CTTTTTTTCTTTTTTTTTTTTTCAAG...........................................................................................................................................................................................................................265.000.00--2.001.001.00-1.00----------------------------------------------------------------
....TCTTTTTTTCTTTTTTTTTTTTTTGGTA..........................................................................................................................................................................................................................284.000.00-4.00---------------------------------------------------------------------
.....CTTTTTTTCTTTTTTTTTTTTTTCTGG..........................................................................................................................................................................................................................274.000.002.00---2.00------------------------------------------------------------------
...TTCTTTTTTTCTTTTTTTTTTTTTTGGC...........................................................................................................................................................................................................................283.000.003.00----------------------------------------------------------------------
....TCTTTTTTTCTTTTTTTTTTTTTCTGG...........................................................................................................................................................................................................................273.000.002.001.00---------------------------------------------------------------------
...TTCTTTTTTTCTTTTTTTTTTTTTTGCCAG.........................................................................................................................................................................................................................303.000.001.00----2.00-----------------------------------------------------------------
....TCTTTTTTTCTTTTTTTTTTTTTTCTGG..........................................................................................................................................................................................................................283.000.002.001.00---------------------------------------------------------------------
.....CTTTTTTTCTTTTTTTTTTTTTCTGG...........................................................................................................................................................................................................................263.000.003.00----------------------------------------------------------------------
....TCTTTTTTTCTTTTTTTTTTTTTTCAAA..........................................................................................................................................................................................................................283.000.00--2.001.00-------------------------------------------------------------------
....TCTTTTTTTCTTTTTTTTTTTTTTGGC...........................................................................................................................................................................................................................273.000.003.00----------------------------------------------------------------------
....TCTTTTTTTCTTTTTTTTTTTTTTGGAGG.........................................................................................................................................................................................................................293.000.002.001.00---------------------------------------------------------------------
....TCTTTTTTTCTTTTTTTTTTTTTTGAGC..........................................................................................................................................................................................................................283.000.002.001.00---------------------------------------------------------------------
..TTTCTTTTTTTCTTTTTTTTTTATG...............................................................................................................................................................................................................................253.000.00----1.00-2.00----------------------------------------------------------------
..TTTCTTTTTTTCTTTTTTTTTTACAG..............................................................................................................................................................................................................................262.000.00----2.00------------------------------------------------------------------
................................................................................................................CCATTCTCCTGCCTCAGCCTCCACCTC...............................................................................................................272.000.00--------------------------2.00--------------------------------------------
....TCTTTTTTTCTTTTTTTTTTTTTTGGGA..........................................................................................................................................................................................................................282.000.001.001.00---------------------------------------------------------------------
....TCTTTTTTTCTTTTTTTTTTTTTCCCT...........................................................................................................................................................................................................................272.000.001.001.00---------------------------------------------------------------------
.TTTTCTTTTTTTCTTTTTTTTTTAATG..............................................................................................................................................................................................................................272.000.00---2.00-------------------------------------------------------------------
.....CTTTTTTTCTTTTTTTTTTTTTTGCAG..........................................................................................................................................................................................................................272.000.001.001.00---------------------------------------------------------------------
.....CTTTTTTTCTTTTTTTTTTTTTTCATG..........................................................................................................................................................................................................................272.000.001.00----1.00-----------------------------------------------------------------
.TTTTCTTTTTTTCTTTTTTTTTTTTTTCCG...........................................................................................................................................................................................................................302.000.00--1.00---1.00----------------------------------------------------------------
....TCTTTTTTTCTTTTTTTTTTTTTTGCAG..........................................................................................................................................................................................................................282.000.001.001.00---------------------------------------------------------------------
.TTTTCTTTTTTTCTTTTTTTTTTAGC...............................................................................................................................................................................................................................262.000.00-2.00---------------------------------------------------------------------
.........................................................................................................................................................ACAGGGGCCCGCCACCACACCGGC.........................................................................242.000.002.00----------------------------------------------------------------------
....TCTTTTTTTCTTTTTTTTTTTTTCAA............................................................................................................................................................................................................................262.000.00--2.00--------------------------------------------------------------------
.TTTTCTTTTTTTCTTTTTTTTTTTTTTGGCA..........................................................................................................................................................................................................................312.000.001.001.00---------------------------------------------------------------------
..........................................................................................AGCTCTGCCTCCCGGGTCCGC...........................................................................................................................................212.000.00-2.00---------------------------------------------------------------------
.TTTTCTTTTTTTCTTTTTTTTTTTTTCG.............................................................................................................................................................................................................................282.000.00---1.001.00------------------------------------------------------------------
....TCTTTTTTTCTTTTTTTTTTTTTTCCGG..........................................................................................................................................................................................................................282.000.002.00----------------------------------------------------------------------
.TTTTCTTTTTTTCTTTTTTTTTTTTTTGGCTG.........................................................................................................................................................................................................................322.000.002.00----------------------------------------------------------------------
...............................................................GCAGTGGCGCGATCTCTG.........................................................................................................................................................................1801.001.00-------1.00---------------------------------------------------------------
...TTCTTTTTTTCTTTTTTTTTTTTCAAG............................................................................................................................................................................................................................271.000.00-----1.00-----------------------------------------------------------------
....TCTTTTTTTCTTTTTTTTTTTTTTCGGG..........................................................................................................................................................................................................................281.000.00-1.00---------------------------------------------------------------------
.TTTTCTTTTTTTCTTTTTTTTTTTTTTGGCAG.........................................................................................................................................................................................................................321.000.001.00----------------------------------------------------------------------
..............................................................................................................................................TAGCTGGGACTACAGGGGCT........................................................................................201.000.00-------1.00---------------------------------------------------------------
........................................................CTGGGGTGCAGTGGCGCGATCCAGC.........................................................................................................................................................................251.000.00-1.00---------------------------------------------------------------------
.................................................................................CTCACTGCAAGCTCTGCCTCCCGGGCCC.............................................................................................................................................281.000.001.00----------------------------------------------------------------------
....TCTTTTTTTCTTTTTTTTTTTTTTGGTCT.........................................................................................................................................................................................................................291.000.001.00----------------------------------------------------------------------
..........................................................................................................TTCACGCCATTCTCCTGCCTCT..........................................................................................................................221.000.00--------1.00--------------------------------------------------------------
....TCTTTTTTTCTTTTTTTTTTTTTTCGC...........................................................................................................................................................................................................................271.000.001.00----------------------------------------------------------------------
....TCTTTTTTTCTTTTTTTTTTTTTTGCCCC.........................................................................................................................................................................................................................291.000.001.00----------------------------------------------------------------------
..TTTCTTTTTTTCTTTTTTTTTTTTCCAG............................................................................................................................................................................................................................281.000.00----1.00------------------------------------------------------------------
....TCTTTTTTTCTTTTTTTTTTTATTG.............................................................................................................................................................................................................................251.000.00--1.00--------------------------------------------------------------------
...........................................TCTGTCGCCTAGGCTGGGGTGCAGTGGGG..................................................................................................................................................................................291.000.00-1.00---------------------------------------------------------------------
.................................................................AGTGGCGCGATCTCTGCTCACT...................................................................................................................................................................2201.001.00-------1.00---------------------------------------------------------------
................................................................................................................................................................CCCGCCACCACACCCGGCTAACATC.................................................................251.000.00-----1.00-----------------------------------------------------------------
...TTCTTTTTTTCTTTTTTTTTTTTTTCCTC..........................................................................................................................................................................................................................291.000.001.00----------------------------------------------------------------------
.....CTTTTTTTCTTTTTTTTTTTTTTCTCT..........................................................................................................................................................................................................................271.000.00--1.00--------------------------------------------------------------------
.....................................................................................................................................................................................TTTTTTGTATTTTTAGTAGAGACGGGGTCAC......................................311.000.001.00----------------------------------------------------------------------
.....................................................AGGCTGGGGTGCAGTGGCGCGTGGT............................................................................................................................................................................251.000.00--------------------------------------1.00--------------------------------
..........................TTGAGATGGAGTCTCGCTCTGA..........................................................................................................................................................................................................221.000.00-----------1.00-----------------------------------------------------------
..TTTCTTTTTTTCTTTTTTTTTTTTTCTC............................................................................................................................................................................................................................281.000.00-1.00---------------------------------------------------------------------
..................................................................................................................................................................CGCCACCACACCCGGCTAACTC..................................................................221.000.00-----1.00-----------------------------------------------------------------
.........................................................................................................................................................ACAGGGGCCCGCCACCACACCCGGCTATTT...................................................................301.000.00-1.00---------------------------------------------------------------------
.........................................................................................................................................................ACAGGGGCCCGCCACCACACCCGAC........................................................................251.000.00-1.00---------------------------------------------------------------------
.....CTTTTTTTCTTTTTTTTTTTTTCGT............................................................................................................................................................................................................................251.000.00------1.00----------------------------------------------------------------
..TTTCTTTTTTTCTTTTTTTTTTTTTTCCTG..........................................................................................................................................................................................................................301.000.00---1.00-------------------------------------------------------------------
..TTTCTTTTTTTCTTTTTTTTTTTTTTGGC...........................................................................................................................................................................................................................291.000.001.00----------------------------------------------------------------------
....TCTTTTTTTCTTTTTTTTTTTTTTGGGTT.........................................................................................................................................................................................................................291.000.001.00----------------------------------------------------------------------
..............................................................................................................................................TAGCTGGGACTACAGGGGCC........................................................................................2001.001.00--------1.00--------------------------------------------------------------
.........................................................................................................................................................ACAGGGGCCCGCCACCACACCCCCAG.......................................................................261.000.001.00----------------------------------------------------------------------
...TTCTTTTTTTCTTTTTTTTTTTTTTGGCGG.........................................................................................................................................................................................................................301.000.00-1.00---------------------------------------------------------------------
...TTCTTTTTTTCTTTTTTTTTTTTTCAAG...........................................................................................................................................................................................................................281.000.00-----1.00-----------------------------------------------------------------
.....................................................................................................................................................................................TTTTTTGTATTTTTAGTAGAGACGGGGTGC.......................................301.000.00-1.00---------------------------------------------------------------------
......TTTTTTTCTTTTTTTTTTTTTTGAGGGGG.......................................................................................................................................................................................................................291.000.001.00----------------------------------------------------------------------
....TCTTTTTTTCTTTTTTTTTTTTTTCACC..........................................................................................................................................................................................................................281.000.001.00----------------------------------------------------------------------
......................................................................................................................................................................................................AGAGACGGGGTTTCACCGGGTC..............................221.000.001.00----------------------------------------------------------------------
.....CTTTTTTTCTTTTTTTTTTTACC..............................................................................................................................................................................................................................231.000.001.00----------------------------------------------------------------------
.....CTTTTTTTCTTTTTTTTTTTTTCACG...........................................................................................................................................................................................................................261.000.00----1.00------------------------------------------------------------------
.....................................................AGGCTGGGGTGCAGTGGCGACC...............................................................................................................................................................................221.000.00-1.00---------------------------------------------------------------------
...TTCTTTTTTTCTTTTTTTTTTTTTTGGCC..........................................................................................................................................................................................................................291.000.001.00----------------------------------------------------------------------
...TTCTTTTTTTCTTTTTTTTTTTTTCTGG...........................................................................................................................................................................................................................281.000.001.00----------------------------------------------------------------------
.........................................................................................AAGCTCTGCCTCCCGGGTTCACGCCCTCC....................................................................................................................................291.000.001.00----------------------------------------------------------------------
....TCTTTTTTTCTTTTTTTTTTTTTTGCTTC.........................................................................................................................................................................................................................291.000.001.00----------------------------------------------------------------------
.TTTTCTTTTTTTCTTTTTTTTTTTTTATAT...........................................................................................................................................................................................................................301.000.00------1.00----------------------------------------------------------------
...TTCTTTTTTTCTTTTTTTTTTTTTTGACGTT........................................................................................................................................................................................................................311.000.00----1.00------------------------------------------------------------------
.........................................................................................................................................................ACAGGGGCCCGCCACCACCCT............................................................................211.000.001.00----------------------------------------------------------------------
..........................................................................................................................................................................................................................TTAGCCAGGATGGTCTCGACCCT.........231.000.001.00----------------------------------------------------------------------
....TCTTTTTTTCTTTTTTTTTTTTTCAAT...........................................................................................................................................................................................................................271.000.00---1.00-------------------------------------------------------------------
......................................................................................................................................................ACTACAGGGGCCCGCCACCACACCGGCT........................................................................281.000.00-1.00---------------------------------------------------------------------
.TTTTCTTTTTTTCTTTTTTTTTTATA...............................................................................................................................................................................................................................261.000.00---1.00-------------------------------------------------------------------
....TCTTTTTTTCTTTTTTTTTTTTTTGGGTA.........................................................................................................................................................................................................................291.000.001.00----------------------------------------------------------------------
....................................................TAGGCTGGGGTGCAGTGGCGCAGC..............................................................................................................................................................................241.000.00-1.00---------------------------------------------------------------------
..................................................................................................................................................................CGCCACCACACCCGGCTAATTTCCG...............................................................251.000.001.00----------------------------------------------------------------------
....TCTTTTTTTCTTTTTTTTTTTTTTCGGT..........................................................................................................................................................................................................................281.000.00-1.00---------------------------------------------------------------------
...TTCTTTTTTTCTTTTTTTTTTTTTTGGGTC.........................................................................................................................................................................................................................301.000.001.00----------------------------------------------------------------------
...TTCTTTTTTTCTTTTTTTTTTTTTTGAGTTGG.......................................................................................................................................................................................................................321.000.001.00----------------------------------------------------------------------
....TCTTTTTTTCTTTTTTTTTTTTTCTCT...........................................................................................................................................................................................................................271.000.00-----1.00-----------------------------------------------------------------
......................................................................CGCGATCTCTGCTCACTGC.................................................................................................................................................................1901.001.00-----------------1.00-----------------------------------------------------
...............................................................................................................................................AGCTGGGACTACAGGGGCCCGCCACCACAGCC...........................................................................321.000.00-1.00---------------------------------------------------------------------
...........................................................................................................................................AGCTAGCTGGGACTACAGCTTG.........................................................................................221.000.00-1.00---------------------------------------------------------------------
....TCTTTTTTTCTTTTTTTTTTTTTTGCCG..........................................................................................................................................................................................................................281.000.001.00----------------------------------------------------------------------
....................................................TAGGCTGGGGTGCAGTCGC...................................................................................................................................................................................191.000.00--------------------------------------------------1.00--------------------
....TCTTTTTTTCTTTTTTTTTTTTTTGACGG.........................................................................................................................................................................................................................291.000.001.00----------------------------------------------------------------------
.TTTTCTTTTTTTCTTTTTTTTTTTATG..............................................................................................................................................................................................................................271.000.00---1.00-------------------------------------------------------------------
..................................................................................................................................................................CGCCACCACACCCGGCTAATTTCGC...............................................................251.000.001.00----------------------------------------------------------------------
....................................................................................ACTGCAAGCTCTGCCTCCCGGGTCCAG...........................................................................................................................................271.000.00-1.00---------------------------------------------------------------------
.TTTTCTTTTTTTCTTTTTTTTTTTCAAG.............................................................................................................................................................................................................................281.000.001.00----------------------------------------------------------------------
.............................................................................TCTGCTCACTGCAAGCGGC..........................................................................................................................................................1901.001.001.00----------------------------------------------------------------------
.............................................................................TCTGCTCACTGCAAGCTCTGCCTTT....................................................................................................................................................251.000.00----------------------1.00------------------------------------------------
....TCTTTTTTTCTTTTTTTTTTTTTTCTAG..........................................................................................................................................................................................................................281.000.00--1.00--------------------------------------------------------------------
...TTCTTTTTTTCTTTTTTTTTTTTTTCTCG..........................................................................................................................................................................................................................291.000.001.00----------------------------------------------------------------------
...TTCTTTTTTTCTTTTTTTTTTTTTTGGCAG.........................................................................................................................................................................................................................301.000.00-----1.00-----------------------------------------------------------------
..................................................................................................................................................................................................TAGTAGAGACGGGGTTTCAGCTC.................................231.000.00-1.00---------------------------------------------------------------------
.....CTTTTTTTCTTTTTTTTTTTTTCAAT...........................................................................................................................................................................................................................261.000.00----1.00------------------------------------------------------------------
....TCTTTTTTTCTTTTTTTTTTTAATC.............................................................................................................................................................................................................................251.000.001.00----------------------------------------------------------------------
....TCTTTTTTTCTTTTTTTTTTTTTTGTGC..........................................................................................................................................................................................................................281.000.001.00----------------------------------------------------------------------
.TTTTCTTTTTTTCTTTTTTTTTTTTTTGCG...........................................................................................................................................................................................................................301.000.00-1.00---------------------------------------------------------------------
................................................................................................................................................GCTGGGACTACAGGGGCCC.......................................................................................1901.001.00----------1.00------------------------------------------------------------
....TCTTTTTTTCTTTTTTTTTTTTTTGGTC..........................................................................................................................................................................................................................281.000.00-1.00---------------------------------------------------------------------
....TCTTTTTTTCTTTTTTTTTTTTTTCCTG..........................................................................................................................................................................................................................281.000.00----1.00------------------------------------------------------------------
.TTTTCTTTTTTTCTTTTTTTTTATTG...............................................................................................................................................................................................................................261.000.00--1.00--------------------------------------------------------------------
....................................................TAGGCTGGGGTGCAGTGGCGATCA..............................................................................................................................................................................241.000.001.00----------------------------------------------------------------------
.........................................................................................AAGCTCTGCCTCCCGGGTCCGC...........................................................................................................................................221.000.001.00----------------------------------------------------------------------
.TTTTCTTTTTTTCTTTTTTTTTTTATAT.............................................................................................................................................................................................................................281.000.00------1.00----------------------------------------------------------------
.TTTTCTTTTTTTCTTTTTTTTTTACC...............................................................................................................................................................................................................................261.000.001.00----------------------------------------------------------------------
...TTCTTTTTTTCTTTTTTTTTTTTCCG.............................................................................................................................................................................................................................261.000.00---1.00-------------------------------------------------------------------
................................................................................................................................................................................................................TTTCACCGTGTTAGCCAGGATGGGGGT...............271.000.00-1.00---------------------------------------------------------------------
.....................................................................GCGCGATCTCTGCTCACTGCAAAA.............................................................................................................................................................241.000.00---------------1.00-------------------------------------------------------
.......TTTTTTCTTTTTTTTTTTTTTGAGATTTGC.....................................................................................................................................................................................................................301.000.00-1.00---------------------------------------------------------------------
.TTTTCTTTTTTTCTTTTTTTTTTTTTTGGC...........................................................................................................................................................................................................................301.000.001.00----------------------------------------------------------------------
......................................................................CGCGATCTCTGCTCAGGCG.................................................................................................................................................................191.000.00---------------------------------------------------------------------1.00-
....................................................TAGGCTGGGGTGCAGTGGGACG................................................................................................................................................................................221.000.00----------------------------------1.00------------------------------------
..........................................................................ATCTCTGCTCACTGCAAGCTCTGCCTCCCCAG................................................................................................................................................321.000.00-1.00---------------------------------------------------------------------
..TTTCTTTTTTTCTTTTTTTTTTTTTCGAG...........................................................................................................................................................................................................................291.000.001.00----------------------------------------------------------------------
....TCTTTTTTTCTTTTTTTTTTTTTTGGCC..........................................................................................................................................................................................................................281.000.001.00----------------------------------------------------------------------
...TTCTTTTTTTCTTTTTTTTTTTTTTGACAGA........................................................................................................................................................................................................................311.000.001.00----------------------------------------------------------------------
....TCTTTTTTTCTTTTTTTTTTTTTTCCAT..........................................................................................................................................................................................................................281.000.001.00----------------------------------------------------------------------
..................................................................................................................................................................CGCCACCACACCCGGCTAAAC...................................................................211.000.00-----1.00-----------------------------------------------------------------
..TTTCTTTTTTTCTTTTTTTTTTAAGC..............................................................................................................................................................................................................................261.000.001.00----------------------------------------------------------------------
....TCTTTTTTTCTTTTTTTTTTTTTTGCAGG.........................................................................................................................................................................................................................291.000.001.00----------------------------------------------------------------------
.............................................................................................TCTGCCTCCCGGGTTCACGCCCCC.....................................................................................................................................241.000.001.00----------------------------------------------------------------------
....TCTTTTTTTCTTTTTTTTTTTTTTGAGAGGG.......................................................................................................................................................................................................................311.000.00-----1.00-----------------------------------------------------------------
...................................AGTCTCGCTCTGTCGCCTAGGCGGAG.............................................................................................................................................................................................261.000.001.00----------------------------------------------------------------------
.........................................................TGGGGTGCAGTGGCGAGAG..............................................................................................................................................................................191.000.00------------------------------------1.00----------------------------------
..TTTCTTTTTTTCTTTTTTTTTTTTTTCATA..........................................................................................................................................................................................................................301.000.00-----1.00-----------------------------------------------------------------
.............................................................................................................................................CTAGCTGGGACTACAGGGGCCCGCCACCACCCCC...........................................................................341.000.00----------------------------------------------------1.00------------------
......................................................................CGCGATCTCTGCTCACTGCTT...............................................................................................................................................................2101.001.00-------------------------------------------------------1.00---------------
................................................................................................................................................GCTGGGACTACAGGGGCC........................................................................................1801.001.00----------1.00------------------------------------------------------------
.........................................GCTCTGTCGCCTAGGCTGAAG............................................................................................................................................................................................211.000.00------------------------------------------------------1.00----------------
.....CTTTTTTTCTTTTTTTTTTTTTCATG...........................................................................................................................................................................................................................261.000.00----1.00------------------------------------------------------------------
.................................................................................................CCTCCCGGGTTCACGCCAGTTC...................................................................................................................................221.000.00---------------------------1.00-------------------------------------------
..................................................................................................................ATTCTCCTGCCTCAGCCTCCAGAGTAGCCCAG........................................................................................................321.000.00-----1.00-----------------------------------------------------------------
......TTTTTTTCTTTTTTTTTTTTTTGAGTTTG.......................................................................................................................................................................................................................291.000.00-----1.00-----------------------------------------------------------------
................................................................................................................................................................................................................................AGGATGGTCTCGATCTCCTTATA...231.000.00-----------------------1.00-----------------------------------------------
...TTCTTTTTTTCTTTTTTTTTTTTTTCCCA..........................................................................................................................................................................................................................291.000.00---1.00-------------------------------------------------------------------
...........................................................................................................................................................................ACCCGGCTAATTTTTTGTATTTCTCG.....................................................261.000.00-1.00---------------------------------------------------------------------
....TCTTTTTTTCTTTTTTTTTTTTTTGGGT..........................................................................................................................................................................................................................281.000.001.00----------------------------------------------------------------------
....TCTTTTTTTCTTTTTTTTTTTACAG.............................................................................................................................................................................................................................251.000.00----1.00------------------------------------------------------------------
..TTTCTTTTTTTCTTTTTTTTTTTTTTCCCG..........................................................................................................................................................................................................................301.000.00------1.00----------------------------------------------------------------
.TTTTCTTTTTTTCTTTTTTTTTTTCCAG.............................................................................................................................................................................................................................281.000.001.00----------------------------------------------------------------------
......................................................................................................................TCCTGCCTCAGCCTCCAGAGTAGCCCAG........................................................................................................281.000.001.00----------------------------------------------------------------------
..........................................................................................AGCTCTGCCTCCCGGGTTCACGCCCCTG....................................................................................................................................281.000.00-1.00---------------------------------------------------------------------
.....................................................AGGCTGGGGTGCAGTGGCGC.................................................................................................................................................................................2001.001.00--------------------1.00--------------------------------------------------
.............................................................................TCTGCTCACTGCAAGC.............................................................................................................................................................1601.001.00--------------------------------------------1.00--------------------------
................................................................CAGTGGCGCGATCTCTGCGAA.....................................................................................................................................................................211.000.00--------------------------------------------------------------------1.00--
..TTTCTTTTTTTCTTTTTTTTTTTTTAGT............................................................................................................................................................................................................................281.000.001.00----------------------------------------------------------------------
..........TTTCTTTTTTTTTTTTTTGAGAGGCT......................................................................................................................................................................................................................261.000.00-1.00---------------------------------------------------------------------
....................................................................................ACTGCAAGCTCTGCCTCCCGGGTCCGC...........................................................................................................................................271.000.001.00----------------------------------------------------------------------
..TTTCTTTTTTTCTTTTTTTTTTTTTCTGG...........................................................................................................................................................................................................................291.000.001.00----------------------------------------------------------------------
.....................................................................GCGCGATCTCTGCTCACTGC.................................................................................................................................................................2001.001.00-----------------1.00-----------------------------------------------------
....................................................TAGGCTGGGGTGCAGGGCG...................................................................................................................................................................................191.000.00-1.00---------------------------------------------------------------------
........................................................................................................................................................................................................AGACGGGGTTTCACCGTGTAACC...........................231.000.001.00----------------------------------------------------------------------
....................................................................................................................................................................................................GTAGAGACGGGGTTTCAGCA..................................201.000.00--------1.00--------------------------------------------------------------
...TTCTTTTTTTCTTTTTTTTTTTTTTCCG...........................................................................................................................................................................................................................281.000.00---1.00-------------------------------------------------------------------
...................................................................................................................................................GGGACTACAGGGGCCCGC.....................................................................................1801.001.00-------1.00---------------------------------------------------------------
...TTCTTTTTTTCTTTTTTTTTTTTTTCAGG..........................................................................................................................................................................................................................291.000.001.00----------------------------------------------------------------------
.TTTTCTTTTTTTCTTTTTTTTTTTTTCCG............................................................................................................................................................................................................................291.000.00-1.00---------------------------------------------------------------------
........................................................................................................................................AGTAGCTAGCTGGGACTACATG............................................................................................221.000.00----------------------------------------------------------------------1.00
...TTCTTTTTTTCTTTTTTTTTTTTCTAT............................................................................................................................................................................................................................271.000.00------1.00----------------------------------------------------------------
....TCTTTTTTTCTTTTTTTTTTTTTTGAGGCGG.......................................................................................................................................................................................................................311.000.001.00----------------------------------------------------------------------
....TCTTTTTTTCTTTTTTTTTTTTTTGGCTT.........................................................................................................................................................................................................................291.000.001.00----------------------------------------------------------------------
..............................................................................................................................................TAGCTGGGACTACAGGGGCCCTCC....................................................................................241.000.00-1.00---------------------------------------------------------------------
...................................................................................................................TTCTCCTGCCTCAGCCTCCAGAGTAGGGG..........................................................................................................291.000.001.00----------------------------------------------------------------------
.................................................................................................CCTCCCGGGTTCACGCCCTC.....................................................................................................................................201.000.00---------------------------------------------------------------1.00-------
..................................................................................................................................................................CGCCACCACACCCGGCTAAACG..................................................................221.000.00-----1.00-----------------------------------------------------------------
................................................................................GCTCACTGCAAGCTCTGCCTCCCGGGTCCGC...........................................................................................................................................311.000.00-----1.00-----------------------------------------------------------------
........TTTTTCTTTTTTTTTTTTTTGAGATGGGGCC...................................................................................................................................................................................................................311.000.001.00----------------------------------------------------------------------
.....CTTTTTTTCTTTTTTTTTTTTTTCTAG..........................................................................................................................................................................................................................271.000.00------1.00----------------------------------------------------------------
...TTCTTTTTTTCTTTTTTTTTTTTTTGGCT..........................................................................................................................................................................................................................291.000.001.00----------------------------------------------------------------------
.............................................................................................................................................................................................ATTTTTAGTAGAGACGGGGTTTGCCG...................................261.000.001.00----------------------------------------------------------------------
..................................................................................................................................................TGGGACTACAGGGGCC........................................................................................1601.001.00-------1.00---------------------------------------------------------------
.................................................GCCTAGGCTGGGGTGCAGTGGGATG................................................................................................................................................................................251.000.00-1.00---------------------------------------------------------------------
....TCTTTTTTTCTTTTTTTTTTTTTCTAG...........................................................................................................................................................................................................................271.000.00-----1.00-----------------------------------------------------------------
.TTTTCTTTTTTTCTTTTTTTTTATG................................................................................................................................................................................................................................251.000.00------1.00----------------------------------------------------------------
......TTTTTTTCTTTTTTTTTTTTTTGAATGG........................................................................................................................................................................................................................281.000.00-1.00---------------------------------------------------------------------
....TCTTTTTTTCTTTTTTTTTTTTTCGGA...........................................................................................................................................................................................................................271.000.001.00----------------------------------------------------------------------
.........................................................................................................................................................ACAGGGGCCCGCCACCACACCGGCT........................................................................251.000.00-1.00---------------------------------------------------------------------
..................................................................................................................................................................CGCCACCACACCCGGCTAATTCCT................................................................241.000.00-----1.00-----------------------------------------------------------------
....TCTTTTTTTCTTTTTTTTTTTATC..............................................................................................................................................................................................................................241.000.00-1.00---------------------------------------------------------------------
.........................................................................................................................................................ACAGGGGCCCGCCACCACGGCG...........................................................................221.000.00-1.00---------------------------------------------------------------------
....TCTTTTTTTCTTTTTTTTTTTTTTGCAGT.........................................................................................................................................................................................................................291.000.001.00----------------------------------------------------------------------
......TTTTTTTCTTTTTTTTTTTTTTGAGGATT.......................................................................................................................................................................................................................291.000.001.00----------------------------------------------------------------------
......TTTTTTTCTTTTTTTTTTTTTTGAAAGG........................................................................................................................................................................................................................281.000.001.00----------------------------------------------------------------------
.TTTTCTTTTTTTCTTTTTTTTTTTTTCAAG...........................................................................................................................................................................................................................301.000.00---1.00-------------------------------------------------------------------
......TTTTTTTCTTTTTTTTTTTTTTGAGAAAAG......................................................................................................................................................................................................................301.000.00----1.00------------------------------------------------------------------
...............................................................................TGCTCACTGCAAGCTCTGCCTCCCGGGTCTGC...........................................................................................................................................321.000.00-1.00---------------------------------------------------------------------
..........................................................................................................................................................................................TGTATTTTTAGTAGAGACGGGGTTTGTAG...................................291.000.00-----------------------------------1.00-----------------------------------
...TTCTTTTTTTCTTTTTTTTTTTTTCTAG...........................................................................................................................................................................................................................281.000.001.00----------------------------------------------------------------------
....TCTTTTTTTCTTTTTTTTTTTTTCTC............................................................................................................................................................................................................................261.000.001.00----------------------------------------------------------------------
..TTTCTTTTTTTCTTTTTTTTTTTTTTGAGCT.........................................................................................................................................................................................................................311.000.001.00----------------------------------------------------------------------
...TTCTTTTTTTCTTTTTTTTTTTATAG.............................................................................................................................................................................................................................261.000.00---1.00-------------------------------------------------------------------
.....CTTTTTTTCTTTTTTTTTTTTTCAA............................................................................................................................................................................................................................251.000.00------1.00----------------------------------------------------------------
..........................................................................................................TTCACGCCATTCTCCTGCCTCTAA........................................................................................................................241.000.00---------------------------------------------1.00-------------------------
....TCTTTTTTTCTTTTTTTTTTTTTTGCCAG.........................................................................................................................................................................................................................291.000.00-1.00---------------------------------------------------------------------
................................................................................GCTCACTGCAAGCTCTGCCTCCCGGGTCCG............................................................................................................................................301.000.00-----1.00-----------------------------------------------------------------
..TTTCTTTTTTTCTTTTTTTTTTTTTTCAT...........................................................................................................................................................................................................................291.000.00--1.00--------------------------------------------------------------------
.............................................TGTCGCCTAGGCTGGGGTGCAGGGG....................................................................................................................................................................................251.000.00-1.00---------------------------------------------------------------------
..........................................................................................................TTCACGCCATTCTCCTGCCTAAA.........................................................................................................................231.000.00---------------------------------------1.00-------------------------------
.TTTTCTTTTTTTCTTTTTTTTTTTCCAT.............................................................................................................................................................................................................................281.000.00----1.00------------------------------------------------------------------
............................................................GGTGCAGTGGCGCGATCTGTC.........................................................................................................................................................................211.000.001.00----------------------------------------------------------------------
...........................................................................................................................................................AGGGGCCCGCCACCACACCCGGCGG......................................................................251.000.00-1.00---------------------------------------------------------------------
.TTTTCTTTTTTTCTTTTTTTTTTTTTTCCTC..........................................................................................................................................................................................................................311.000.001.00----------------------------------------------------------------------
....TCTTTTTTTCTTTTTTTTTTTTTCAAA...........................................................................................................................................................................................................................271.000.00--1.00--------------------------------------------------------------------
...TTCTTTTTTTCTTTTTTTTTTTTTTGCAG..........................................................................................................................................................................................................................291.000.001.00----------------------------------------------------------------------
.........................TTTGAGATGGAGTCTCGCTCTGTCGCGCG....................................................................................................................................................................................................291.000.00-1.00---------------------------------------------------------------------
....TCTTTTTTTCTTTTTTTTTTTTTTGGCT..........................................................................................................................................................................................................................281.000.00-1.00---------------------------------------------------------------------
.....CTTTTTTTCTTTTTTTTTTTTTTGGGTC.........................................................................................................................................................................................................................281.000.001.00----------------------------------------------------------------------
....TCTTTTTTTCTTTTTTTTTTTTTTGGTG..........................................................................................................................................................................................................................281.000.001.00----------------------------------------------------------------------
.TTTTCTTTTTTTCTTTTTTTTTTTTTACC............................................................................................................................................................................................................................291.000.00-1.00---------------------------------------------------------------------
........................................................................CGATCTCTGCTCACTGCCATA.............................................................................................................................................................211.000.00-----------------------1.00-----------------------------------------------
....TCTTTTTTTCTTTTTTTTTTTTTTCAC...........................................................................................................................................................................................................................271.000.001.00----------------------------------------------------------------------
......................................................................................................................................AGAGTAGCTAGCTGGGACTGCA..............................................................................................221.000.00------------1.00----------------------------------------------------------
....TCTTTTTTTCTTTTTTTTTTTTTTGTGG..........................................................................................................................................................................................................................281.000.001.00----------------------------------------------------------------------
.TTTTCTTTTTTTCTTTTTTTTTTTTCAC.............................................................................................................................................................................................................................281.000.00----1.00------------------------------------------------------------------
..................................................CCTAGGCTGGGGTGCAGTGGGAC.................................................................................................................................................................................231.000.00-1.00---------------------------------------------------------------------
.....................................................AGGCTGGGGTGCAGTGCGC..................................................................................................................................................................................191.000.001.00----------------------------------------------------------------------
....TCTTTTTTTCTTTTTTTTTTTTTTCATG..........................................................................................................................................................................................................................281.000.00--1.00--------------------------------------------------------------------
...............................................TCGCCTAGGCTGGGGTGCAGTGGCGCG................................................................................................................................................................................2750.400.400.40----------------------------------------------------------------------
...................................AGTCTCGCTCTGTCGCCTAGGCTGGGG............................................................................................................................................................................................2730.330.33-0.33---------------------------------------------------------------------
.....................................TCTCGCTCTGTCGCCTAGGCTGGGG............................................................................................................................................................................................2560.330.33-0.17---0.17-----------------------------------------------------------------
......................................CTCGCTCTGTCGCCTAGGCTGGG.............................................................................................................................................................................................2390.220.22----------------------------0.22------------------------------------------
.....................................TCTCGCTCTGTCGCCTAGGCTGGGGTGCA........................................................................................................................................................................................2950.200.20-0.20---------------------------------------------------------------------

Antisense strand
ATTTTCTTTTTTTCTTTTTTTTTTTTTTGAGATGGAGTCTCGCTCTGTCGCCTAGGCTGGGGTGCAGTGGCGCGATCTCTGCTCACTGCAAGCTCTGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCAGAGTAGCTAGCTGGGACTACAGGGGCCCGCCACCACACCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCG
...........................................................................................((((((......(((((...((.........))...))))).))))))...((((((((......((((....)).))...))))))))......................................................................
.....................................................................................86.............................................................................................181...................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)
SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)
SRR390723(GSM850202)
total small RNA. (cell line)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR189786SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR390724(GSM850203)
small rna immunoprecipitated. (cell line)
GSM532876(GSM532876)
G547T. (cervix)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR189787GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040028(GSM532913)
G026N. (cervix)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR390725(GSM850204)
small rna immunoprecipitated. (cell line)
SRR189782GSM956925PazD5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR040008(GSM532893)
G727N. (cervix)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577743(Rovira)
total RNA. (breast)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
......................................................GGCTGGGGTGCAGTGGCGCGATGGGC.......................................................................................................................................................................... 268.000.008.00----------------------------------------------------------------------
...........................................................................................GCTCTGCCTCCCGGGTTCACGCCATCCGC.................................................................................................................................. 293.000.001.002.00---------------------------------------------------------------------
..........................................................................................................................................................CAGGGGCCCGCCACCACACCCGGCTC...................................................................... 263.000.003.00----------------------------------------------------------------------
......................................................GGCTGGGGTGCAGTGGCGCGATCAGG.......................................................................................................................................................................... 263.000.002.001.00---------------------------------------------------------------------
.......................................................................................................................CCTGCCTCAGCCTCCAGAGTATA............................................................................................................ 233.000.00------------------------2.00---1.00------------------------------------------
..................................................CCTAGGCTGGGGTGCAGTGGCGCGATGG............................................................................................................................................................................ 283.000.003.00----------------------------------------------------------------------
.....................................................AGGCTGGGGTGCAGTGGCGCGATCAGC.......................................................................................................................................................................... 272.000.001.001.00---------------------------------------------------------------------
........................................................................................CAAGCTCTGCCTCCCGGGTTAAT........................................................................................................................................... 232.000.00---------------------1.00---------------------------------------1.00---------
......................................................GGCTGGGGTGCAGTGGCGCGATGG............................................................................................................................................................................ 242.000.002.00----------------------------------------------------------------------
......................................................GGCTGGGGTGCAGTGGCGCGATAGAG.......................................................................................................................................................................... 262.000.002.00----------------------------------------------------------------------
......................................................GGCTGGGGTGCAGTGGCGCGATGGGG.......................................................................................................................................................................... 262.000.002.00----------------------------------------------------------------------
............................................................................................................................................................GGGGCCCGCCACCACACCCGGCTCG..................................................................... 252.000.002.00----------------------------------------------------------------------
.................................GGAGTCTCGCTCTGTCGCCTAGGCTCCCC............................................................................................................................................................................................ 292.000.00-2.00---------------------------------------------------------------------
.....................................................................................................................................................................................................................CCGTGTTAGCCAGGATGGTCTCGATCTCCTA...... 312.000.00-------1.001.00--------------------------------------------------------------
............................................................................................CTCTGCCTCCCGGGTTCACGCCATTCAA.................................................................................................................................. 282.000.00---------2.00-------------------------------------------------------------
....................................................................................................................TCTCCTGCCTCAGCCTCCAGAGCCC............................................................................................................. 251.000.00-------------------------1.00---------------------------------------------
......................................................................................TGCAAGCTCTGCCTCCCGGGTTTTGG.......................................................................................................................................... 261.000.00---------------1.00-------------------------------------------------------
......................................................................................................................................................................................................................CGTGTTAGCCAGGATGGTCTCGAC............ 241.000.00----------1.00------------------------------------------------------------
.....................................................................................CTGCAAGCTCTGCCTCCCGGGTTA............................................................................................................................................. 241.000.00-------------1.00---------------------------------------------------------
....................................................................................................................TCTCCTGCCTCAGCCTCCAGT................................................................................................................. 211.000.00--------------------1.00--------------------------------------------------
.....................................TCTCGCTCTGTCGCCTAAGAA................................................................................................................................................................................................ 211.000.00------------------1.00----------------------------------------------------
..........................................................................................AGCTCTGCCTCCCGGGTTCACGCCACCC.................................................................................................................................... 281.000.001.00----------------------------------------------------------------------
.................................................................................................................................................................................................................................GGATGGTCTCGATCTCCTGACCTGGT 261.000.001.00----------------------------------------------------------------------
...........................................................................................GCTCTGCCTCCCGGGTTCACGCCACCGC................................................................................................................................... 281.000.001.00----------------------------------------------------------------------
.......................................................................................................................CCTGCCTCAGCCTCCAGAGTATT............................................................................................................ 231.000.00--------------------------------------------------------1.00--------------
................................................................................................................................................................CCCGCCACCACACCCACAC....................................................................... 191.000.00--------------------------------1.00--------------------------------------
...................................................................................................................TTCTCCTGCCTCAGCCTCCAAGGG............................................................................................................... 241.000.00-1.00---------------------------------------------------------------------
..........................................................................................................................................................CAGGGGCCCGCCACCACACCCGGCTG...................................................................... 261.000.00-1.00---------------------------------------------------------------------
...........................................................................................................................................................................................................................TAGCCAGGATGGTCTCGATCTCCTC...... 251.000.00-------------------------------1.00---------------------------------------
....................................................................................ACTGCAAGCTCTGCCTCCCGAAAA.............................................................................................................................................. 241.000.00-------1.00---------------------------------------------------------------
..........................................CTCTGTCGCCTAGGCTGGGGTGCAGTACCC.................................................................................................................................................................................. 301.000.001.00----------------------------------------------------------------------
...........................................................................................GCTCTGCCTCCCGGGTTCACGCCATCTGA.................................................................................................................................. 291.000.00-1.00---------------------------------------------------------------------
.................................................................................CTCACTGCAAGCTCTGCCTCCCGGGTTGGAG.......................................................................................................................................... 311.000.001.00----------------------------------------------------------------------
...............................................................................................................................................................................................................................CAGGATGGTCTCGATCTCCCCTA.... 231.000.00--------------------------------------------------------------1.00--------
.................................................................................................................................................................................................................................GGATGGTCTCGATCTCCTGGTG... 221.000.00-1.00---------------------------------------------------------------------
.....................................................................................................................CTCCTGCCTCAGCCTCCAGCGTT.............................................................................................................. 231.000.00---------------------------------------------------1.00-------------------
.................................................................................................................................................................................................................................GGATGGTCTCGATCTCGCC...... 191.000.00------------------------------------------1.00----------------------------
......................................................................................................................TCCTGCCTCAGCCTCCAGAGTATCGC.......................................................................................................... 261.000.00-1.00---------------------------------------------------------------------
................................TGGAGTCTCGCTCTGTCGCCTCCC.................................................................................................................................................................................................. 241.000.001.00----------------------------------------------------------------------
....................................................................................................................................................GGACTACAGGGGCCCGCTCTG................................................................................. 211.000.00------------------------------1.00----------------------------------------
......................................................GGCTGGGGTGCAGTGGCGCGATCGGGC......................................................................................................................................................................... 271.000.001.00----------------------------------------------------------------------
.........................................................................................................GTTCACGCCATTCTCCTGCCTCAGCCAAA.................................................................................................................... 291.000.00--------------1.00--------------------------------------------------------
...................................................................................................................TTCTCCTGCCTCAGCCTCCAACGG............................................................................................................... 241.000.00-1.00---------------------------------------------------------------------
..................................................................................TCACTGCAAGCTCTGCCTCCCGGTAA.............................................................................................................................................. 261.000.00------------------------------------------------1.00----------------------
.....................................................................................................................................................................................................................CCGTGTTAGCCAGGAGGGG.................. 191.000.00----------------------------------------------------------1.00------------
......................................................GGCTGGGGTGCAGTGGCGCGATGACG.......................................................................................................................................................................... 261.000.001.00----------------------------------------------------------------------
...............................................................................................................................................................................................................................CAGGATGGTCTCGATCTCCTGC..... 221.000.00----------------------------------------------1.00------------------------
.........................................................................................AAGCTCTGCCTCCCGGGTTCACGCCATTG.................................................................................................................................... 291.000.00------------------------------------------------------------------1.00----
...........................................................................................GCTCTGCCTCCCGGGTTCACGCCATCTTC.................................................................................................................................. 291.000.001.00----------------------------------------------------------------------
.................................................................................................................................................................................................................................GGATGGTCTCGATCTCCTGACCTGGCA 271.000.001.00----------------------------------------------------------------------
................................................................................................................................................................CCCGCCACCACACCCGGCTAAAA................................................................... 231.000.001.00----------------------------------------------------------------------
.....................................................................................................................CTCCTGCCTCAGCCTCCAGAGTAGCTAGACC...................................................................................................... 311.000.001.00----------------------------------------------------------------------
............................................................................................................CACGCCATTCTCCTGTAG............................................................................................................................ 181.000.00------------1.00----------------------------------------------------------
...........................................................................................................TCACGCCATTCTCCTGCCTCAGCCCCAA................................................................................................................... 281.000.00----------------1.00------------------------------------------------------
................................................................................................................................GCCTCCAGAGTAGCTAG......................................................................................................... 171.000.00-------1.00---------------------------------------------------------------
....................................................................................................................TCTCCTGCCTCAGCCTCCAGAGTCTGC........................................................................................................... 271.000.001.00----------------------------------------------------------------------
................................................................................................................CCATTCTCCTGCCTCAGCCTCCAGAGTG.............................................................................................................. 281.000.00-----------1.00-----------------------------------------------------------
......................................................GGCTGGGGTGCAGTGGCGCGAGGGG........................................................................................................................................................................... 251.000.001.00----------------------------------------------------------------------
....................................................................................................................................................GGACTACAGGGGCCCGTCTG.................................................................................. 201.000.00-----------------------------------------------------1.00-----------------
......................................................GGCTGGGGTGCAGTGGCGCGATCTCGGC........................................................................................................................................................................ 281.000.001.00----------------------------------------------------------------------
......................................................GGCTGGGGTGCAGTGGCGCGATGATG.......................................................................................................................................................................... 261.000.001.00----------------------------------------------------------------------
......................................................GGCTGGGGTGCAGTGGCGCGATCTGG.......................................................................................................................................................................... 261.000.001.00----------------------------------------------------------------------
...............................................................................................................TGGAGGCTGAGGCAGGAGAATGGC................................................................................................................... 2401.001.00-------------------1.00---------------------------------------------------
................................................................................................................................................................CCCGCCACCACACCCGGCTAATTTTTGAAA............................................................ 301.000.00---------------------------------1.00-------------------------------------
.....................................................................................................................................................................................................................CCGTGTTAGCCAGGATGGTCTCGAGCGA......... 281.000.00-1.00---------------------------------------------------------------------
.....................................................................................CTGCAAGCTCTGCCTCCCGGAA............................................................................................................................................... 221.000.00---------------------1.00-------------------------------------------------
..............................................GTCGCCTAGGCTGGGGTGCAGTGGCGCGATG............................................................................................................................................................................. 311.000.001.00----------------------------------------------------------------------
................................................................................................................................................................CCCGCCACCACACCCGGCTAATGGCG................................................................ 261.000.00-1.00---------------------------------------------------------------------
......................................................GGCTGGGGTGCAGTGGCGCGACGGC........................................................................................................................................................................... 251.000.001.00----------------------------------------------------------------------
..............................................................................................................................................................GGCCCGCCACCACACCCGGCTAATG................................................................... 251.000.00-1.00---------------------------------------------------------------------
..............................................................................................................................................................GGCCCGCCACCACACCCGGCTATG.................................................................... 241.000.00-1.00---------------------------------------------------------------------
.................................................................................................................................................................................................................................GGATGGTCTCGATCTCCTGACCTGAC 261.000.00-1.00---------------------------------------------------------------------
.......................................................................................................................................................................CCACACCCGGCTAATTTTTTGTGCAC......................................................... 261.000.00-1.00---------------------------------------------------------------------
.....................................................................................................................CTCCTGCCTCAGCCTCCAGCACG.............................................................................................................. 231.000.00------------1.00----------------------------------------------------------
......................................................GGCTGGGGTGCAGTGGCGCGATCGGT.......................................................................................................................................................................... 261.000.001.00----------------------------------------------------------------------
.................................................................................................................................................................................................................................GGATGGTCTCGATCTCCTGAGACC. 241.000.00-1.00---------------------------------------------------------------------
...................................................................................CACTGCAAGCTCTGCCTCCCGGGTTTTTC.......................................................................................................................................... 291.000.00-------------------------------------1.00---------------------------------
.........................................GCTCTGTCGCCTAGGCTGGGGTGCAGTC..................................................................................................................................................................................... 281.000.001.00----------------------------------------------------------------------
..................................GAGTCTCGCTCTGTCGCCTAGGCTAGG............................................................................................................................................................................................. 271.000.00-1.00---------------------------------------------------------------------
............................................................................CTCTGCTCACTGCAAGCTCTGCCTCTCG.................................................................................................................................................. 281.000.00-----1.00-----------------------------------------------------------------
....................................................................................ACTGCAAGCTCTGCCTCCCGAGA............................................................................................................................................... 231.000.00-------------------------------------------1.00---------------------------
............................................................................................................................................................................................................................AGCCAGGATGGTCTCGATCTCCTCTG.... 261.000.00-----------------------------1.00-----------------------------------------
.....................................TCTCGCTCTGTCGCCTAGGCTGGGGTGCATCCC.................................................................................................................................................................................... 3351.000.001.00----------------------------------------------------------------------
.....................................................................................................................................................................................................................CCGTGTTAGCCAGGATGGTCTCGAGCG.......... 271.000.00-1.00---------------------------------------------------------------------
......................................................GGCTGGGGTGCAGTGGCGCGATGAC........................................................................................................................................................................... 251.000.001.00----------------------------------------------------------------------
...................................................................................CACTGCAAGCTCTGCCTCCCGGCG............................................................................................................................................... 241.000.00---------1.00-------------------------------------------------------------
..................................................CCTAGGCTGGGGTGCAGTGGCGCGATTG............................................................................................................................................................................ 281.000.00-1.00---------------------------------------------------------------------
...............................................................................................TGCCTCCCGGGTTCACGCCATCGGC.................................................................................................................................. 251.000.00-1.00---------------------------------------------------------------------
...........................................................................................................................................................................................................CGGGGTTTCACCGTGTTAGCCAGGATGCCC................. 301.000.001.00----------------------------------------------------------------------
.................................................................................CTCACTGCAAGCTCTGCCTCCCGAA................................................................................................................................................ 251.000.00-------------------------1.00---------------------------------------------
.....................................................................................................................CTCCTGCCTCAGCCTCCAGAGTTACC........................................................................................................... 261.000.00----------------1.00------------------------------------------------------
...........................................................................................................................CCTCAGCCTCCAGAGTAGA............................................................................................................ 191.000.00-------------------------------------------------------------------1.00---
.....................................................................................................................................................................................................................CCGTGTTAGCCAGGATGGTCTCGATGCG......... 281.000.00-1.00---------------------------------------------------------------------
......................................CCTAGGCGACAGAGCGAG.................................................................................................................................................................................................. 1801.001.00--------1.00--------------------------------------------------------------
................................................................................................................TACTCTGGAGGCTGAGGCAGGAGAATGG.............................................................................................................. 2801.001.00-------1.00---------------------------------------------------------------
......................................................GGCTGGGGTGCAGTGGCGCGATGGC........................................................................................................................................................................... 251.000.001.00----------------------------------------------------------------------
.......................................................GCTGGGGTGCAGTGGCGCGATTCGG.......................................................................................................................................................................... 251.000.001.00----------------------------------------------------------------------
................................................................................................................................................................CCCGCCACCACACCCGGCTAAGCCC................................................................. 251.000.00-1.00---------------------------------------------------------------------
.............................................................................................................................................................................CCGGCTAATTTTTTGTATTTCGGC..................................................... 241.000.00-1.00---------------------------------------------------------------------
......................................................GGCTGGGGTGCAGTGGCGCGAGGGC........................................................................................................................................................................... 251.000.001.00----------------------------------------------------------------------
....................................................TAGGCTGGGGTGCAGTGGCGCGATT............................................................................................................................................................................. 251.000.00----------------------1.00------------------------------------------------
.......................................CAGCCTAGGCGACAGAGCGA............................................................................................................................................................................................... 2001.001.00-----------------------------------------------------------1.00-----------
................................TGGAGTCTCGCTCTGTCGCGCGC................................................................................................................................................................................................... 231.000.00-1.00---------------------------------------------------------------------
................................................................................................................................................................CCCGCCACCACACCCGGCTAATGGAC................................................................ 261.000.00-1.00---------------------------------------------------------------------
...................................................................................CACTGCAAGCTCTGCCTCCCGCGA............................................................................................................................................... 241.000.00----------------------------------------------------------------1.00------
................................................................................................................CCATTCTCCTGCCTCAGCCTCCAGAGTAGCAAA......................................................................................................... 331.000.00---------------------------------------------------------1.00-------------
...................................................................................................................TTCTCCTGCCTCAGCCTCCAGAGAGGG............................................................................................................ 271.000.00-1.00---------------------------------------------------------------------
.................................GGAGTCTCGCTCTGTCGCCTTCTC................................................................................................................................................................................................. 241.000.001.00----------------------------------------------------------------------
...................................................CTAGGCTGGGGTGCAGTGGCGCGATC............................................................................................................................................................................. 261.000.001.00----------------------------------------------------------------------
...................................AGTCTCGCTCTGTCGCCTAGTAA................................................................................................................................................................................................ 231.000.00-----------------------------------------------------------------1.00-----
.................................GGAGTCTCGCTCTGTCGCCTCCC.................................................................................................................................................................................................. 231.000.00-1.00---------------------------------------------------------------------
.......................................................................GGGAGGCAGAGCTTGCAGTGAGCAGAGATCGC................................................................................................................................................... 3201.001.00--------1.00--------------------------------------------------------------
...............................................................................................................................................................................................................................CAGGATGGTCTCGATCTCCCC...... 211.000.00-1.00---------------------------------------------------------------------
.....................................................................................................................................................................................................................CCGTGTTAGCCAGGATGGTCTCGATCTCCTC...... 311.000.00--------1.00--------------------------------------------------------------
................................TGGAGTCTCGCTCTGTCGCCTCCCC................................................................................................................................................................................................. 251.000.001.00----------------------------------------------------------------------
.....................................................................................................................CTCCTGCCTCAGCCTCCAGAGTCAAC........................................................................................................... 261.000.00-1.00---------------------------------------------------------------------
.....................................................................................................................................................................................................................CCGTGTTAGCCAGGATGGTCTCGATCTCCC....... 301.000.00-----------1.00-----------------------------------------------------------
......................................................................................................................TCCTGCCTCAGCCTCCAGAGTATA............................................................................................................ 241.000.00-------1.00---------------------------------------------------------------
..............................................................................................................................................................................CGGCTAATTTTTTGTATTTTTAGTAGCG................................................ 281.000.00------------------------------------------------------------1.00----------
.................................................................................................................................................................................................................................GGATGGTCTCGATCTCCTGACCTGC 251.000.00-1.00---------------------------------------------------------------------
...................................AGTCTCGCTCTGTCGCCTTTAC................................................................................................................................................................................................. 221.000.00-1.00---------------------------------------------------------------------
......................................................GGCTGGGGTGCAGTGGCGCGATCTGGGC........................................................................................................................................................................ 281.000.001.00----------------------------------------------------------------------
......................................................GGCTGGGGTGCAGTGGCGCGATCTCGGA........................................................................................................................................................................ 281.000.001.00----------------------------------------------------------------------
.................................................................................................................................................................................................................................GGATGGTCTCGATCTCCTGACCTCGGGCA 291.000.001.00----------------------------------------------------------------------
......................................................................................................CGGGTTCACGCCATTCTTGAT............................................................................................................................... 211.000.00----------------------------------------1.00------------------------------
...................................................................................................................................................................GCCACCACACCCGGCTAATTTCA................................................................ 231.000.00-------------------1.00---------------------------------------------------
................................................................................................................................................................CCCGCCACCACACCCGGCTACC.................................................................... 221.000.001.00----------------------------------------------------------------------
................................................................................................................CCATTCTCCTGCCTCAGCCTCCAGAGAA.............................................................................................................. 281.000.00--------------1.00--------------------------------------------------------
..........................................CTCTGTCGCCTAGGCTGGGGTGCAGGG..................................................................................................................................................................................... 271.000.001.00----------------------------------------------------------------------
................................................................................................................................................................CCCGCCACCACACCCGGCA....................................................................... 191.000.00-----------------------------------------------1.00-----------------------
.....................................................AGGCTGGGGTGCAGTGGCGCGATCGCC.......................................................................................................................................................................... 271.000.00-1.00---------------------------------------------------------------------
................................TGGAGTCTCGCTCTGTCGCCTACGC................................................................................................................................................................................................. 251.000.00-1.00---------------------------------------------------------------------
..................................................................................................................................................TGGGACTACAGGGGCCCGCCACTATA.............................................................................. 261.000.00-----------------------------------------1.00-----------------------------
.......................................................GCTGGGGTGCAGTGGCGCGATGGAC.......................................................................................................................................................................... 251.000.00-1.00---------------------------------------------------------------------
........................................................................................CAAGCTCTGCCTCCCGGGTTAA............................................................................................................................................ 221.000.00-------------1.00---------------------------------------------------------
....................................................................................................CCCGGGTTCACGCCATTCTCCTTAA............................................................................................................................. 251.000.00------------------1.00----------------------------------------------------
............................................................................................................................................................................................................................AGCCAGGATGGTCTCGATCTCCTCTTT... 271.000.00-------------------------------------------------1.00---------------------
......................................................GGCTGGGGTGCAGTGGCGCGATCGCG.......................................................................................................................................................................... 261.000.00-----1.00-----------------------------------------------------------------
.....................................CCTAGGCGACAGAGCGAGA.................................................................................................................................................................................................. 1901.001.00-------1.00---------------------------------------------------------------
...........................................................................................GCTCTGCCTCCCGGGTTCAGCAG........................................................................................................................................ 231.000.001.00----------------------------------------------------------------------
.............................................................................................................................................CCCCTGTAGTCCCAGCTAG.......................................................................................... 1940.250.25---------------------------0.25-------------------------------------------
.................................................ATCGCGCCACTGCACCCCAGCCTAGGC.............................................................................................................................................................................. 2790.220.220.22----------------------------------------------------------------------
....................................ACCCCAGCCTAGGCGACAGAGCGAGAC........................................................................................................................................................................................... 2760.170.17-0.17---------------------------------------------------------------------
.................................................AGATCGCGCCACTGCACCCCAGCCTAGGC............................................................................................................................................................................ 2990.110.110.11----------------------------------------------------------------------