| (1) BREAST | (7) CELL-LINE | (1) CERVIX | (1) LIVER | (1) OTHER | (5) SKIN | (1) XRN.ip |
| CTTCATTCAGGTCTCTGCTTAATTGTCATCTCTCAGTGCCTTATCACAACCCAACGCTGTACATTGTCGGCCTCGTCCAATAGAGTGGAAGCATCATAGCGGCTGGGCTGTCTCTGGCTGTTCGTCCCGTGTCCCAGTGCCTGGCACATAGCAGGAGCCCAGTAAGTGCGTGGCTGACGTCTTTTTTTTTTTCTCCACAGGCAAGGTGACCGTTCTGGATGCTAGAGTGAGTGTGCCCACCTGCGTAAGG .................................................................................................................................(((.((((...)))).))).....((((......(((.((((.....))))))).........))))...................................................... .................................................................................................................................130...................................................................200................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189786 | SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR330879(SRX091717) tissue: skin psoriatic involveddisease state:. (skin) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR343335 | SRR343334 | SRR330865(SRX091703) tissue: skin psoriatic involveddisease state:. (skin) | SRR040040(GSM532925) G612N. (cervix) | GSM956925PAZD5 | SRR330911(SRX091749) tissue: normal skindisease state: normal. (skin) | TAX577739(Rovira) total RNA. (breast) | SRR330884(SRX091722) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330902(SRX091740) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver) | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR553572(SRX182778) source: Frontal Cortex. (Frontal Cortex) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...................................................................................................................................................................................TCTTTTTTTTTTTCTCCATG................................................... | 20 | 21.00 | 0.00 | 14.00 | - | - | 6.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................................................................TTTTTTTTCTCCACATCAG............................................... | 19 | 3.00 | 0.00 | - | - | - | - | - | - | - | - | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................................CAGTGCCTGGCACATAGCAGGCGCT........................................................................................... | 25 | 3.00 | 0.00 | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................................................................................CCCAGTAAGTGCGTGTC............................................................................ | 17 | 3.00 | 0.00 | - | - | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................AACGCTGTACATTGTCGGCCTCGT.............................................................................................................................................................................. | 24 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................AGTGCCTGGCACATAGCAGGCGCT........................................................................................... | 24 | 2.00 | 0.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................................AGTGCCTGGCACATAGCAGGCG............................................................................................. | 22 | 2.00 | 0.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................................AGTGCCTGGCACATAGCAGGAGC............................................................................................ | 23 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................CCCAGTAAGTGCGTGTCA........................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | |
| ..............................................................................................................................................................................TGACGTCTTTTTTTTTG........................................................... | 17 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................GACGTCTTTTTTTTTTTTAAG...................................................... | 21 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................................AGTGCCTGGCACATAGCAGGCGC............................................................................................ | 23 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................................................................................................................TCTTTTTTTTTTTCTCCATA................................................... | 20 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................................................................................................................TCTTTTTTTTTTTCTCCATT................................................... | 20 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................ACGTCTTTTTTTTTTTCTGG...................................................... | 20 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................ACGTCTTTTTTTTTTTCTCCTTTG.................................................. | 24 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................................................................................TTTTTTTTTCTCCACCAAG................................................ | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | |
| ................................................................................................................................................................................ACGTCTTTTTTTTTTTCTTCTG.................................................... | 22 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................CCAGTAAGTGCGTGGG............................................................................ | 16 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................ACGTCTTTTTTTTTTTCG........................................................ | 18 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................................................................TGCGTGGCTGACGTCTTTTTTTTTTCTCC....................................................... | 29 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................ACGTCTTTTTTTTTTTGGA....................................................... | 19 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................................................................................................................TCTTTTTTTTTTTCTCGCCC................................................... | 20 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................ACGTCTTTTTTTTTTTCTTTCG.................................................... | 22 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................ACGTCTTTTTTTTTTCTGG....................................................... | 19 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................ACGTCTTTTTTTTTTTCTAG...................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................................................................................................................CTGGATGCTAGAGTGAGTGTGCC............. | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .....................................................................................................................................................................................TTTTTTTTTTTCTCCACCCGG................................................ | 21 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................................................................................GCAAGGTGACCGTTCTGGATGCTAGA........................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ............................................................................................................................................CTGGCACATAGCAGG............................................................................................... | 15 | 0 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................TCTTTTTTTTTTTCTCGGCC................................................... | 20 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................................................................................CCCAGTAAGTGCGTGTCAT.......................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................................................................................CTTTTTTTTTTTCTCCACAG.................................................. | 20 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................CGTCTTTTTTTTTTTCTC....................................................... | 18 | 7 | 0.14 | 0.14 | - | - | - | - | 0.14 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................AATTGTCATCTCTCAGT..................................................................................................................................................................................................................... | 17 | 8 | 0.12 | 0.12 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.12 |
| CTTCATTCAGGTCTCTGCTTAATTGTCATCTCTCAGTGCCTTATCACAACCCAACGCTGTACATTGTCGGCCTCGTCCAATAGAGTGGAAGCATCATAGCGGCTGGGCTGTCTCTGGCTGTTCGTCCCGTGTCCCAGTGCCTGGCACATAGCAGGAGCCCAGTAAGTGCGTGGCTGACGTCTTTTTTTTTTTCTCCACAGGCAAGGTGACCGTTCTGGATGCTAGAGTGAGTGTGCCCACCTGCGTAAGG .................................................................................................................................(((.((((...)))).))).....((((......(((.((((.....))))))).........))))...................................................... .................................................................................................................................130...................................................................200................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189786 | SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR330879(SRX091717) tissue: skin psoriatic involveddisease state:. (skin) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR343335 | SRR343334 | SRR330865(SRX091703) tissue: skin psoriatic involveddisease state:. (skin) | SRR040040(GSM532925) G612N. (cervix) | GSM956925PAZD5 | SRR330911(SRX091749) tissue: normal skindisease state: normal. (skin) | TAX577739(Rovira) total RNA. (breast) | SRR330884(SRX091722) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330902(SRX091740) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver) | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR553572(SRX182778) source: Frontal Cortex. (Frontal Cortex) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ......................................................................................................................................................................................................AGGCAAGGTGACCGTTCTG................................. | 19 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................CGTCCCGTGTCCCAGGC............................................................................................................... | 17 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | |
| ...................................................................................................................................................................................................CACAGGCAAGGTGACTTT..................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |