ID: uc009zdu.1_intron_1_0_chr12_2224712_f.3p
GENE: CACNA1C(2)
chr12:2229291-2229540+


(1)
BRAIN
(3)
BREAST
(13)
CELL-LINE
(2)
HEART
(1)
HELA
(1)
LIVER
(3)
OTHER

Sense strand
ACATATTAGGGAAAATTTTGGCGGGGACCCACTAGAAGCACTTAAAAAGGCATATGTTTCTTTTCAGAATACAAGGGGCTTGGAATGCATTGTTTAAACAAAATTCTTATGAATCTTTGATTCATTTTAAAAAATATGTAGATTATGTTTGTTTCACTTGTACTTTCTGTGGCATTAACTTCCTTGACTCCCTTTCTCAGACCATTTGAAATAATTATTTTACTGACTATTTTTGCCAATTGTGTGGCCT
......................................................................................((((..((((((..........(((((((...)))))))))))))....))))...............................................................................................................
...................................................................................84.....................................................139.............................................................................................................
SizePerfect hitTotal NormPerfect NormSRR037937(GSM510475)
293cand2. (cell line)
SRR029124(GSM416753)
HeLa. (hela)
SRR037936(GSM510474)
293cand1. (cell line)
SRR037931(GSM510469)
293GFP. (cell line)
SRR029126(GSM416755)
143B. (cell line)
SRR029131(GSM416760)
MCF7. (cell line)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
GSM416733(GSM416733)
HEK293. (cell line)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR037935(GSM510473)
293cand3. (cell line)
SRR029129(GSM416758)
SW480. (cell line)
SRR189782SRR189785SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR189784SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)
SRR191547(GSM715657)
155genomic small RNA (size selected RNA from . (breast)
SRR029130(GSM416759)
DLD2. (cell line)
SRR029132(GSM416761)
MB-MDA231. (cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577738(Rovira)
total RNA. (breast)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR029125(GSM416754)
U2OS. (cell line)
........................................................................................ATTGTTTAAACAAAACGA................................................................................................................................................1891.000.0029.0018.006.007.006.007.006.003.004.00-1.00-------1.001.00--1.001.00
........................................................................................ATTGTTTAAACAAAACGAA...............................................................................................................................................197.000.00--1.001.001.00--1.00-2.001.00-------------
........................................................................................ATTGTTTAAACAAAACCA................................................................................................................................................182.000.00--1.00-------1.00-------------
................................TAGAAGCACTTAAAAACTG.......................................................................................................................................................................................................192.000.00------------1.00-1.00---------
........................................................................................ATTGTTTAAACAAAACGGA...............................................................................................................................................191.000.00---------1.00--------------
.........................................................................AGGGGCTTGGAATGCATTGTT............................................................................................................................................................2111.001.00--------------------1.00---
....................................................................................................................TTGATTCATTTTAAAACAA...................................................................................................................191.000.00-----------------1.00------
................................................................................................................................................................................AACTTCCTTGACTCCCTTTCTCAGACCA..............................................2811.001.00-------------1.00----------
................................TAGAAGCACTTAAAAATTA.......................................................................................................................................................................................................191.000.00-----------1.00------------
...................................................................................................................................................................................TTCCTTGACTCCCTTTCTCAGA.................................................2211.001.00----------------1.00-------
..............................................................................................................................................................................TTAACTTCCTTGACTCCCTTTCTCAG..................................................2611.001.00---------------1.00--------
..............................................................................................................................................................................TTAACTTCCTTGACTG............................................................161.000.00------------1.00-----------

Antisense strand
ACATATTAGGGAAAATTTTGGCGGGGACCCACTAGAAGCACTTAAAAAGGCATATGTTTCTTTTCAGAATACAAGGGGCTTGGAATGCATTGTTTAAACAAAATTCTTATGAATCTTTGATTCATTTTAAAAAATATGTAGATTATGTTTGTTTCACTTGTACTTTCTGTGGCATTAACTTCCTTGACTCCCTTTCTCAGACCATTTGAAATAATTATTTTACTGACTATTTTTGCCAATTGTGTGGCCT
......................................................................................((((..((((((..........(((((((...)))))))))))))....))))...............................................................................................................
...................................................................................84.....................................................139.............................................................................................................
SizePerfect hitTotal NormPerfect NormSRR037937(GSM510475)
293cand2. (cell line)
SRR029124(GSM416753)
HeLa. (hela)
SRR037936(GSM510474)
293cand1. (cell line)
SRR037931(GSM510469)
293GFP. (cell line)
SRR029126(GSM416755)
143B. (cell line)
SRR029131(GSM416760)
MCF7. (cell line)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
GSM416733(GSM416733)
HEK293. (cell line)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR037935(GSM510473)
293cand3. (cell line)
SRR029129(GSM416758)
SW480. (cell line)
SRR189782SRR189785SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR189784SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)
SRR191547(GSM715657)
155genomic small RNA (size selected RNA from . (breast)
SRR029130(GSM416759)
DLD2. (cell line)
SRR029132(GSM416761)
MB-MDA231. (cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577738(Rovira)
total RNA. (breast)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR029125(GSM416754)
U2OS. (cell line)
.............................CACTAGAAGCACTTAACAGG......................................................................................................................................................................................................... 201.000.00-----------1.00------------
......................................................................................................................................................................................CTTGACTCCCTTTCTCAAACC............................................... 211.000.00---------------------1.00--