ID: uc009yyo.2_intron_1_0_chr11_112099397_f.3p
GENE: (2)
chr11:112101149-112101398+


(3)
B-CELL 		(1)
BRAIN 		(10)
BREAST 		(8)
CELL-LINE 		(1)
CERVIX 		(1)
FIBROBLAST 		(1)
HELA 		(5)
LIVER 		(1)
OTHER 		(3)
SKIN 		(1)
TESTES 		(4)
UTERUS

Sense strand
ACAGGTAGAAGGGCTATACAATGAAAAGGATGCTTGAAGTACATGGTGCTTCCATGCTGAGGTCAATGATTATCTCTGGGATGAAGGCAAATGTGCAAATGTGGGCACAGTCTCTGCACATTGTACTGCCTTTAATAATTTGCCAGCCGTTTAATATGGAGAGCCTATCACAGTAATATTCACCTTTGTTTATTCTTTAGATTGACCCTGCTACGGGAATGGTTATGAATCTGGCTGATCTCAAAAAATA
.....................................................................(((((.....))))).((((((((((((..(((....))).....))))))))....))))........................................................................................................................
.....................................................................70...........................................................131.....................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		TAX577588(Rovira)
total RNA. (breast)		SRR038854(GSM458537)
MM653. (cell line)		TAX577580(Rovira)
total RNA. (breast)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		TAX577740(Rovira)
total RNA. (breast)		TAX577739(Rovira)
total RNA. (breast)		TAX577741(Rovira)
total RNA. (breast)		TAX577742(Rovira)
total RNA. (breast)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR189784SRR037936(GSM510474)
293cand1. (cell line)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		TAX577746(Rovira)
total RNA. (breast)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR189787GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577590(Rovira)
total RNA. (breast)		SRR553576(SRX182782)
source: Testis. (testes)		TAX577579(Rovira)
total RNA. (breast)		SRR189786SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		TAX577453(Rovira)
total RNA. (breast)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040035(GSM532920)
G001T. (cervix)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
..........................................................................................................ACAGTCTCTGCACATTGGTTA...........................................................................................................................2177.000.0020.0015.0021.005.00-2.002.001.001.00-1.00-1.001.002.00---1.00--1.00---------1.00-1.00--1.00-----
..........................................................................................................ACAGTCTCTGCACATTGGTT............................................................................................................................2035.000.0010.006.005.00--2.002.002.001.00-1.001.001.001.00------1.00--------1.00--------1.00---
..........................................................................................................ACAGTCTCTGCACATTGGTTT...........................................................................................................................2118.000.004.009.003.001.00----1.00---------------------------------
..........................................................................................................ACAGTCTCTGCACATTGGT.............................................................................................................................1910.000.00-5.002.002.00------------------1.00-------------------
...........................................................................................................CAGTCTCTGCACATTGGTTA...........................................................................................................................203.000.002.00-1.00---------------------------------------
..........................................................................TCTGGGATGAAGGCAAATGTGCA.........................................................................................................................................................2312.002.00----1.00----1.00--------------------------------
..........................................................................................................ACAGTCTCTGCACATTGTTTAT..........................................................................................................................221.000.001.00-----------------------------------------
...........................................................................................................CAGTCTCTGCACATTGTTTA...........................................................................................................................201.000.00-----------------------------------1.00------
........AAGGGCTATACAATGAAAAGGAT...........................................................................................................................................................................................................................2311.001.00---------1.00--------------------------------
..........................................................................................................ACAGTCTCTGCACATTGTTTT...........................................................................................................................211.000.00---1.00--------------------------------------
................................................................................................................................................................................................................................ATGAATCTGGCTGATGATT.......191.000.00----------------1.00-------------------------
.................................................................................................................................................................AGCCTATCACAGTAATGTGG.....................................................................201.000.00-------------------------1.00----------------
...................................................................................................................................................................................................................TACGGGAATGGTTATGAATCTGG................2311.001.00----------------------------1.00-------------
..........................................................................................................ACAGTCTCTGCACATTGTTT............................................................................................................................201.000.001.00-----------------------------------------
............................................................................................................................................................................................................ACCCTGCTACGGGAATGG............................1811.001.00---------1.00--------------------------------
..........................................................................................................ACAGTCTCTGCACATTGGTA............................................................................................................................201.000.00-----------1.00------------------------------
..........................................................................................................ACAGTCTCTGCACATTGGTAA...........................................................................................................................211.000.00-1.00----------------------------------------
....................................................................................................................................................................................................................................ATCTGGCTGATCTCAAAAA...1911.001.00---------------------------1.00--------------
......AGAAGGGCTATACAATGAAAAGGAT...........................................................................................................................................................................................................................2511.001.00--------------------------1.00---------------
......................................................................................................................................................................................................................................CTGGCTGATCTCAAAAAAT.1911.001.00-----------------1.00------------------------
.......................AAAAGGATGCTTGAAGT..................................................................................................................................................................................................................1711.001.00-------------------1.00----------------------
....................................................................ATTATCTCTGGGATGAAGGCA.................................................................................................................................................................2111.001.00----1.00-------------------------------------
.............................................................................................................................................................................................................................GTTATGAATCTGGCTGATCTCAAA.....2411.001.00-------------------------------------1.00----
...........................................................................................................................................................................................................................TGGTTATGAATCTGGCTGATCTCAA......2511.001.00------------------------1.00-----------------
...........................................................................................................CAGTCTCTGCACATTGGTT............................................................................................................................191.000.00---------------1.00--------------------------
.............................................................................GGGATGAAGGCAAATGTG...........................................................................................................................................................1811.001.00----1.00-------------------------------------
..................................TGAAGTACATGGTGCTGGAA....................................................................................................................................................................................................201.000.00----------------------------------1.00-------
...................................................................................................................................................................................................................TACGGGAATGGTTATGAATCTGGCT..............2511.001.00--------------------------------1.00---------
.........................................................................................................................................................................................................................................GCTGATCTCAAAAAATGCCT201.000.00---------------------------------------1.00--
........AAGGGCTATACAATGAAAAGG.............................................................................................................................................................................................................................2111.001.00----1.00-------------------------------------
...............................................................................................................................................................................................................CTGCTACGGGAATGGTTATGA......................2111.001.00----1.00-------------------------------------
...........................................................................CTGGGATGAAGGCAAATGTGC..........................................................................................................................................................2111.001.00----1.00-------------------------------------
.CAGGTAGAAGGGCTATACAAT....................................................................................................................................................................................................................................2111.001.001.00-----------------------------------------
....................................................................................AGGCAAATGTGCAAATGT....................................................................................................................................................1820.500.50----------------------------------------0.50-

Antisense strand
ACAGGTAGAAGGGCTATACAATGAAAAGGATGCTTGAAGTACATGGTGCTTCCATGCTGAGGTCAATGATTATCTCTGGGATGAAGGCAAATGTGCAAATGTGGGCACAGTCTCTGCACATTGTACTGCCTTTAATAATTTGCCAGCCGTTTAATATGGAGAGCCTATCACAGTAATATTCACCTTTGTTTATTCTTTAGATTGACCCTGCTACGGGAATGGTTATGAATCTGGCTGATCTCAAAAAATA
.....................................................................(((((.....))))).((((((((((((..(((....))).....))))))))....))))........................................................................................................................
.....................................................................70...........................................................131.....................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		TAX577588(Rovira)
total RNA. (breast)		SRR038854(GSM458537)
MM653. (cell line)		TAX577580(Rovira)
total RNA. (breast)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		TAX577740(Rovira)
total RNA. (breast)		TAX577739(Rovira)
total RNA. (breast)		TAX577741(Rovira)
total RNA. (breast)		TAX577742(Rovira)
total RNA. (breast)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR189784SRR037936(GSM510474)
293cand1. (cell line)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		TAX577746(Rovira)
total RNA. (breast)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR189787GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577590(Rovira)
total RNA. (breast)		SRR553576(SRX182782)
source: Testis. (testes)		TAX577579(Rovira)
total RNA. (breast)		SRR189786SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		TAX577453(Rovira)
total RNA. (breast)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040035(GSM532920)
G001T. (cervix)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
....................................................................................................................................TAATAATTTGCCAGCC...................................................................................................... 161.000.00------------------------------1.00-----------
..........................................................................................................................................................................................TGTTTATTCTTTAGATCTT............................................. 191.000.00-----------------------1.00------------------
..............................................................................................................................................................................................................CATTCCCGTAGCAGG............................. 1520.500.50-----------------------------------------0.50