| (1) AGO3.ip | (9) CELL-LINE | (3) CERVIX | (2) LIVER | (1) OTHER | (3) SKIN |
| ACCCACAAGAGGTGGTGAAAACGATCTCTGGTATAAAGCAAATGGAAAAGGTAAAGTGTCGGGATTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCATTTTTAATTTCTTTTAACCTTTCCTGGGTATTCATCAAAAGTTTCTTTTCAAAATTAATTTTTTGGTGAGATACAGTTAGCATGACAGAACTATAAATGTTGATGTTCATTTTATGTTTTTTT ............................................................((((..........................................................))))............................................................................................................................ ..........................................................59....................................................................129....................................................................................................................... | Size | Perfect hit | Total Norm | Perfect Norm | SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR330878(SRX091716) tissue: skin psoriatic involveddisease state:. (skin) | SRR330872(SRX091710) tissue: skin psoriatic involveddisease state:. (skin) | DRR000562(DRX000320) Isolation of RNA following immunoprecipitatio. (ago3 cell line) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | SRR040029(GSM532914) G026T. (cervix) | SRR326279(GSM769509) cytoplasmic fraction was isolated using PARIS. (cell line) | SRR189782 | SRR040007(GSM532892) G601T. (cervix) | SRR040039(GSM532924) G531T. (cervix) | SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR037936(GSM510474) 293cand1. (cell line) | SRR444049(SRX128897) Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ................................................................TTTTCTTTCTTTCTTTCTTTCTTTCTCG.............................................................................................................................................................. | 28 | 14.00 | 0.00 | 8.00 | 1.00 | - | - | - | 1.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................CTTTCTTTCTTTCTTTCTTTCTACG............................................................................................................................. | 25 | 9.00 | 0.00 | 9.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................TCTTTCTTTCTTTCTTTCTTTCTTTCTTGAT................................................................................................................................ | 31 | 8.00 | 0.00 | - | - | 8.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................CTTTCTTTCTTTCTTTCTTTCTTTCTTGATG....................................................................................................................................... | 31 | 8.00 | 0.00 | - | - | - | 8.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................CTTTCTTTCTTTCTTTCTTTCTTTCTATTG........................................................................................................................................................ | 30 | 8.00 | 0.00 | - | 8.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................TTTTCTTTCTTTCTTTCTTTCTTTCTCTG............................................................................................................................................................. | 29 | 3.00 | 0.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................AGCAAATGGAAAAGGTAAAGTGTC.............................................................................................................................................................................................. | 24 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - |
| ................................................................TTTTCTTTCTTTCTTTCTTTCTTTCTTCTCA........................................................................................................................................................... | 31 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................ATTTTCTTTCTTTCTTTCCG....................................................................................................................................................................... | 20 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................CTTTCTTTCTTTCCATTTACAG.................................................................................................................... | 22 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | |
| ................................................................TTTTCTTTCTTTCTTTCTTTCTTTCTTCTAG........................................................................................................................................................... | 31 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......AAGAGGTGGTGAAAACGG.................................................................................................................................................................................................................................. | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | |
| ................................................................TTTTCTTTCTTTCTTTCTTTCTTTCTAATG............................................................................................................................................................ | 30 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................TTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTG......................................................................................................................................................... | 33 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................CTTTCTTTCCATTTTTAATTTCTTTT............................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...............................................................ATTTTCTTTCTTTCTTTCTTCCAG................................................................................................................................................................... | 24 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................TTAATTTCTTTTAACCTTTATG.................................................................................................. | 22 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................TTTTCTTTCTTTCTTTCTTTCTTTCGAGA............................................................................................................................................................. | 29 | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | |
| ................................................................TTTTCTTTCTTTCTTTCTTTCTTTCTTCCG............................................................................................................................................................ | 30 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................ATTTTCTTTCTTTCTTTCTTTCTTACCG............................................................................................................................................................... | 28 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................CTTTCTTTCTTTCTTTCTTTCCATGTCT...................................................................................................................... | 28 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................................................TCTTTCTTTCCATTTTTTTTG.................................................................................................................. | 21 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................TTTTCTTTCTTTCTTTCTTTCTTTCTCCC............................................................................................................................................................. | 29 | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ACCCACAAGAGGTGGTGAAAACGATCTCTGGTATAAAGCAAATGGAAAAGGTAAAGTGTCGGGATTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCATTTTTAATTTCTTTTAACCTTTCCTGGGTATTCATCAAAAGTTTCTTTTCAAAATTAATTTTTTGGTGAGATACAGTTAGCATGACAGAACTATAAATGTTGATGTTCATTTTATGTTTTTTT ............................................................((((..........................................................))))............................................................................................................................ ..........................................................59....................................................................129....................................................................................................................... | Size | Perfect hit | Total Norm | Perfect Norm | SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR330878(SRX091716) tissue: skin psoriatic involveddisease state:. (skin) | SRR330872(SRX091710) tissue: skin psoriatic involveddisease state:. (skin) | DRR000562(DRX000320) Isolation of RNA following immunoprecipitatio. (ago3 cell line) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | SRR040029(GSM532914) G026T. (cervix) | SRR326279(GSM769509) cytoplasmic fraction was isolated using PARIS. (cell line) | SRR189782 | SRR040007(GSM532892) G601T. (cervix) | SRR040039(GSM532924) G531T. (cervix) | SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR037936(GSM510474) 293cand1. (cell line) | SRR444049(SRX128897) Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...............................................................................TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTC.......................................................................................................................................... | 33 | 7.00 | 0.00 | - | - | - | - | 7.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................................CCATTTTTAATTTCTTTTGC.......................................................................................................... | 20 | 2.00 | 0.00 | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | |
| .......................................................................................................................................TTCTTTTAACCTTTCCTG................................................................................................. | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | |
| ...............................................................................................................................................................................................................CATGACAGAACTATAGCT......................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | |
| .......................................................................................................................................TTCTTTTAACCTTTCCC.................................................................................................. | 17 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................................................................................................................................................................................AGAACTATAAATGTTAGC................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | |
| .............................................................GGATTTTCTTTCTTTGGGA.......................................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | |
| .............................................................................................................TTTCTTTCTTTCTTTCCATTAGAG..................................................................................................................... | 24 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................................................................................................................AGTTAGCATGACAGAAGTT.............................. | 19 | 0.14 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.14 | - | |
| .........................................................................................................................................................................................................TCTGTCATGCTAACT.................................. | 15 | 7 | 0.14 | 0.14 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.14 |