ID: uc009ytc.1_intron_0_0_chr11_71818652_r.5p
GENE: C11orf51(3)
chr11:71820934-71821183-


(1)
AGO1.ip 		(4)
AGO2.ip 		(2)
AGO3.ip 		(15)
B-CELL 		(8)
BRAIN 		(6)
BREAST 		(36)
CELL-LINE 		(3)
CERVIX 		(4)
HEART 		(6)
HELA 		(1)
KIDNEY 		(6)
LIVER 		(4)
OTHER 		(1)
RRP40.ip 		(19)
SKIN 		(1)
TESTES 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
ACGAGATGAATGACTACAATGAGTCACCGGATGATGGAGAGGTCAATGAGGTAGGCAAGGGGTATGGGGGAGGGCCTCTGTTCCTGGACCCTTGCTCCTGACCCAGTTGATGGCCAAGGGGTACAGAAACCCTGGATCCAGCCAGGGGCAGGATCTGGGGCTGAGGCTGGCTGAGGCCCCTCCCCACCCACACCCAGCCTCCTCTCCAGGTGGACATGGAAGGCAACGAACAGGATCAGGACCAGTGGAT
........................................................................((((((.((.((..((.((.(((..(((((((..(((.....))).)))).)))...((((((......))))))))))).))..)))).))))))(((....)))........................................................................
...............................................................64................................................................................................................178......................................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		SRR037938(GSM510476)
293Red. (cell line)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR189784SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR189787SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR038858(GSM458541)
MEL202. (cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038857(GSM458540)
D20. (cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR038856(GSM458539)
D11. (cell line)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR029124(GSM416753)
HeLa. (hela)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR029129(GSM416758)
SW480. (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)		SRR191631(GSM715741)
75genomic small RNA (size selected RNA from t. (breast)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR040031(GSM532916)
G013T. (cervix)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR040008(GSM532893)
G727N. (cervix)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR040039(GSM532924)
G531T. (cervix)		SRR038854(GSM458537)
MM653. (cell line)		SRR029126(GSM416755)
143B. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		TAX577744(Rovira)
total RNA. (breast)		SRR191585(GSM715695)
196genomic small RNA (size selected RNA from . (breast)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191399(GSM715509)
36genomic small RNA (size selected RNA from t. (breast)		SRR038853(GSM458536)
MELB. (cell line)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR038862(GSM458545)
MM472. (cell line)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191562(GSM715672)
82genomic small RNA (size selected RNA from t. (breast)		SRR033731(GSM497076)
h929 Cell line (h929). (B cell)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
.........................................................................................................................................................TCTGGGGCTGAGGCTGGCTGA............................................................................21145.0045.00-3.004.004.00---1.00-2.00-4.001.001.001.00---1.00--1.001.00-1.00-1.00----1.00---1.00---1.00--1.00-1.001.001.00--2.00-----------1.00-------1.00-------1.001.00---1.00-1.00---1.00-----1.00-----------1.00---1.00--
........................................................................................................................................................ATCTGGGGCTGAGGCTGGCTGA............................................................................22126.0026.001.00-1.001.00---2.00-1.002.00--1.002.001.00---2.00--2.002.001.00--------1.00----------------------1.00-------------1.001.00--1.00-----------------1.00-----------1.00--------
............................................................................................................................................................................................CACACCCAGCCTCCTCTCCAGT........................................22118.0011.005.00---------------4.00-------------1.00---1.00---------1.00--1.00-----------------1.00----------1.00----1.00---------------------1.00-----1.00---
............................................................................................................................................................................................CACACCCAGCCTCCTCTCCAG.........................................21111.0011.009.00-------------------2.00--------------------------------------------------------------------------------------------
............................................................................................................................................................................................CACACCCAGCCTCCTCTCCAGA........................................22111.0011.001.005.00-----1.00----------1.00-----1.00-----------------------------------1.00------------------1.00---------------------------------
........................................................................................................................................................ATCTGGGGCTGAGGCTGGCTGAA...........................................................................2319.0026.00-------1.00-----1.00-2.00---------1.00--------------1.00-----1.00-------------------------------------------------1.00----1.00-----------
.........................................................................................................................................................TCTGGGGCTGAGGCTGGCTGAA...........................................................................2217.0045.00--1.00--------------1.00-1.00---1.00-----1.00-----------1.00---------1.00-------------------------------------------------------------
.........................................................................................................................................................TCTGGGGCTGAGGCTGGCTGAAA..........................................................................2317.0045.00--1.001.00--------------1.00--2.00----------------------------------------------1.00--------------------------------------1.00-----
........................................................................................................................................................ATCTGGGGCTGAGGCTGGCTGAT...........................................................................2314.0026.00-----4.00-----------------------------------------------------------------------------------------------------------
.........................................................................................................................................................TCTGGGGCTGAGGCTGGCTGAGA..........................................................................2314.002.00----------3.00----------------------------------------------------------------------------------------------------1.00-
............................................................................................................................................................................................CACACCCAGCCTCCTCTCCATT........................................223.000.00-3.00---------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................TCTGGGGCTGAGGCTGGCTGAT...........................................................................2213.0045.00--1.00---------------1.00----------------1.00-----------------------------------------------------------------------------
........................................................................................................................................................ATCTGGGGCTGAGGCTGGCT..............................................................................2013.003.00-2.00-----------------------------------------------------1.00---------------------------------------------------------
.........................................................................................................................................................TCTGGGGCTGAGGCTGGCTGAGT..........................................................................2313.002.00------------1.00-------------2.00--------------------------------------------------------------------------------------
.................................................................................................................................................................................................................GTGGACATGGAAGGCAACGAACAGGATC.............2812.002.00----2.00------------------------------------------------------------------------------------------------------------
........................................................................................................................................................ATCTGGGGCTGAGGCTGGCTGT............................................................................2212.001.00---------1.00-----------------------------------1.00-------------------------------------------------------------------
.............................................................................................................................................................................................ACACCCAGCCTCCTCTCCAGAT.......................................2212.001.002.00----------------------------------------------------------------------------------------------------------------
...........................CGGATGATGGAGAGGTCAA............................................................................................................................................................................................................1912.002.00-----------------2.00-----------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................AGGTGGACATGGAAGGCAAC.......................2012.002.00--------1.00---------------------------------------------------------------------------------1.00----------------------
.........................................................................................................................................................TCTGGGGCTGAGGCTGGCTGAAAA.........................................................................2412.0045.00---------------------------------------------------1.00--------------------------------------------------------1.00----
.........................................................................................................................................................TCTGGGGCTGAGGCTGGCTGAG...........................................................................2212.002.00----------------------------------------1.00-----------------1.00------------------------------------------------------
............................................................................................................................................................................................CACACCCAGCCTCCTCTCCAGC........................................2212.0011.00----------------------------------1.00------------1.00-----------------------------------------------------------------
.........................................................................................................................................................TCTGGGGCTGAGGCTGGCTG.............................................................................2012.002.00--------------1.00----------------------------------------------------------1.00---------------------------------------
........................................................................................................................................................ATCTGGGGCTGAGGCTGGCTGAAT..........................................................................2412.0026.00---------1.00--------------------------1.00----------------------------------------------------------------------------
..........................................................................................................................................................................................................TCTCCAGGTGGACATGGAAGGCAACGA.....................2712.002.00------2.00----------------------------------------------------------------------------------------------------------
....................GAGTCACCGGATGATGGAGAGGT...............................................................................................................................................................................................................2312.002.00----------------------------2.00------------------------------------------------------------------------------------
..............TACAATGAGTCACCGGATG.........................................................................................................................................................................................................................1912.002.00--------------------------------2.00--------------------------------------------------------------------------------
.........................................................................................................................................................TCTGGGGCTGAGGCTGGCTAT............................................................................2112.001.00-----------1.00------------------------1.00----------------------------------------------------------------------------
.................................................................................................................................................................................................................GTGGACATGGAAGGCAA........................1711.001.00--------------------------------------1.00--------------------------------------------------------------------------
.............................................................................................................................................................................................................................GGCAACGAACAGGATCAGGACCAGTGG..2711.001.00----1.00------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................ACCCAGCCTCCTCTCCAGCTT......................................211.000.00-----------------------------------------------------------------------------------1.00-----------------------------
...........................................................................................................................................................TGGGGCTGAGGCTGGCTGAT...........................................................................201.000.00---------------------------------------------------------------------------------------------------1.00-------------
........................................................................................................................................................ATCTGGGGCTGAGGCTGGCTGTAT..........................................................................2411.001.00------------------------------------------1.00----------------------------------------------------------------------
........................................................................................................................................................ATCTGGGGCTGAGGCTGGCTAA............................................................................2211.003.00------------1.00----------------------------------------------------------------------------------------------------
................CAATGAGTCACCGGATGATGGAGAGGT...............................................................................................................................................................................................................2711.001.00------1.00----------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................TGGAAGGCAACGAACAGATGC.............211.000.00------------------------------------------------------------------------1.00----------------------------------------
........................................................................................................................................................ATCTGGGGCTGAGGCTGGCTGATT..........................................................................2411.0026.00-------------1.00---------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................GCAACGAACAGGATCAGGACCAG.....2311.001.00-------------------------------------1.00---------------------------------------------------------------------------
...............................................................................................................................................................................................................AGGTGGACATGGAAGGCAA........................1911.001.00--------1.00--------------------------------------------------------------------------------------------------------
...........................................................................................................................................................TGGGGCTGAGGCTGGCTGAGGC.........................................................................2211.001.00-------------------------------------1.00---------------------------------------------------------------------------
.........................................................................................................................................................TCTGGGGCTGAGGCTGGCTGAAAAA........................................................................2511.0045.00-----------------------------------------1.00-----------------------------------------------------------------------
........................CACCGGATGATGGAGAGGTCAAT...........................................................................................................................................................................................................2311.001.00------------------------------------------------------------------1.00----------------------------------------------
...........................CGGATGATGGAGAGGTCA.............................................................................................................................................................................................................1811.001.00---1.00-------------------------------------------------------------------------------------------------------------
....................................................................GGAGGGCCTCTGTTCGA.....................................................................................................................................................................171.000.00--------------------------------------1.00--------------------------------------------------------------------------
.....................................................................................................................................................AGGATCTGGGGCTGAGGC...................................................................................1811.001.00-------------------------1.00---------------------------------------------------------------------------------------
.........................................................................................................................................................TCTGGGGCTGAGGCTGGC...............................................................................1811.001.00---------------------------------------------------------------------------1.00-------------------------------------
..........................................................................................................................................................CTGGGGCTGAGGCTGGCTGAGA..........................................................................221.000.00--1.00--------------------------------------------------------------------------------------------------------------
........................................................................................................................................................ATCTGGGGCTGAGGCTGGT...............................................................................191.000.00--------------------------------------------------------------------------------1.00--------------------------------
.................................................................................................................................................................................................................GTGGACATGGAAGGCAACGAACAGGATCAGGACTAC.....361.000.00----1.00------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................GAACAGGATCAGGACCAG.....1811.001.00-------------------------------------------1.00---------------------------------------------------------------------
..............................................................................................................................................................................................................................GCAACGAACAGGATCAGGACCAGTGGAGGAT311.000.00----------------------------------------------------------------1.00------------------------------------------------
............................................................................................................................................................................................CACACCCAGCCTCCTCTCCGG.........................................2131.000.331.00----------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................CCAGGTGGACATGGAAGGCAAC.......................2211.001.00--------1.00--------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................AGGCAACGAACAGGATCAGGACCAGTGG..2811.001.00----1.00------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................CACACCCAGCCTCCTCTCCAGAA.......................................2311.0011.00----------------------------------------------------------------------------------------------------1.00------------
.........................................................................................................................................................TCTGGGGCTGAGGCTGGCTAA............................................................................2111.001.00---1.00-------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................GTGGACATGGAAGGCAACG......................1911.001.00-----------------------------1.00-----------------------------------------------------------------------------------
..........................................................................................................................................................................................................................GAAGGCAACGAACAGGATT.............191.000.00---1.00-------------------------------------------------------------------------------------------------------------
..............TACAATGAGTCACCGGATGATGGAGAGG................................................................................................................................................................................................................2811.001.00------1.00----------------------------------------------------------------------------------------------------------
.......................TCACCGGATGATGGAGAGGTCAATGAG........................................................................................................................................................................................................2711.001.00------------------------------------------------1.00----------------------------------------------------------------
.........................................................................................................................................................TCTGGGGCTGAGGCTGGCTTAT...........................................................................2211.001.00--1.00--------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................TCTGGGGCTGAGGCTGGCTGGTA..........................................................................2311.002.00---------------------------------------------------------------1.00-------------------------------------------------
...........................................................................................................................................................TGGGGCTGAGGCTGGCTGAA...........................................................................201.000.00-------------------------------1.00---------------------------------------------------------------------------------
...............................................................................................................................................................................................................AGGTGGACATGGAAGGCA.........................1811.001.00-----------------1.00-----------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................AGGCAACGAACAGGATCAGG..........2011.001.00---------------------------------1.00-------------------------------------------------------------------------------
..........................................................................................................................................................................................................................GAAGGCAACGAACAGGATCA............2011.001.00--------1.00--------------------------------------------------------------------------------------------------------
.........................................................................................................................................................TCTGGGGCTGAGGCTGGCAAAA...........................................................................2211.001.00--1.00--------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................TCTGGGGCTGAGGCTGGCATAA...........................................................................2211.001.00------------1.00----------------------------------------------------------------------------------------------------
.........................................................................................................................................................TCTGGGGCTGAGGCTGGCTGATA..........................................................................2311.0045.00--------------------------------------------------1.00--------------------------------------------------------------
................CAATGAGTCACCGGATGATGGAGAGGTC..............................................................................................................................................................................................................2811.001.00---------------------------------------------------------------------------------------------------------1.00-------
.....................AGTCACCGGATGATGGAGAGG................................................................................................................................................................................................................2111.001.00-------1.00---------------------------------------------------------------------------------------------------------
........................................................................................................................................................ATCTGGGGCTGAGGCTGGCTGGA...........................................................................2311.001.00-------------------------------------------------------------------------------------1.00---------------------------
............................................................................................................................................................................................CACACCCAGCCTCCTCTCCAGTA.......................................2311.0011.00--------------------------------------------------1.00--------------------------------------------------------------
................................................................................................................................................................................................................GGTGGACATGGAAGGCATTTT.....................2121.000.50---1.00-------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................TGGACATGGAAGGCAACGAACAGGATC.............2711.001.00------1.00----------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................ACGAACAGGATCAGGACC.......1811.001.00---------------------------1.00-------------------------------------------------------------------------------------
.................................................................................................................................................................................................................GTGGACATGGAAGGCAACGA.....................2011.001.00---------------------------------------1.00-------------------------------------------------------------------------
.....................................................................................................................................................................GCTGGCTGAGGCCCCTCCCGT................................................................211.000.00-------------------------------------------------------------------------------------------1.00---------------------
..................................................................................................................................................................................................................TGGACATGGAAGGCAACGAAC...................2111.001.00------------------------------1.00----------------------------------------------------------------------------------
.........................................................................................................................................................TCTGGGGCTGAGGCTGGCT..............................................................................1911.001.00--------------------------------------------------------------------------------------------------1.00--------------
....................................................................................................................................................................................................................................AACAGGATCAGGACCAGTG...1911.001.00------------------------------------------------------1.00----------------------------------------------------------
................................................................................................................................................................................................................GGTGGACATGGAAGGCAAC.......................1911.001.00--------1.00--------------------------------------------------------------------------------------------------------
........................................................................................................................................................ATCTGGGGCTGAGGCTGGCCGAA...........................................................................231.000.00---------------1.00-------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................GCAACGAACAGGATCAGGACCAGT....2411.001.00----1.00------------------------------------------------------------------------------------------------------------
........................................................................................................................................................ATCTGGGGCTGAGGCTGGCTG.............................................................................2111.001.00-------------------------------------------------------------------1.00---------------------------------------------
.........................................................................................................................................................TCTGGGGCTGAGGCTGGCTGAAT..........................................................................2311.0045.00-------------------------------------------------------------------------------------------------1.00---------------
...............................................................................................................................................................................................ACCCAGCCTCCTCTCCAGTT.......................................201.000.00------------------------------------------------1.00----------------------------------------------------------------
............................................................................................................................................................GGGGCTGAGGCTGGCGCA............................................................................181.000.00-----------------------------------------------------------------------------------------1.00-----------------------
............................................................................................................................................................................................CACACCCAGCCTCCTCCAGA..........................................201.000.001.00----------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................GGTGGACATGGAAGGCAACGAACAGGA...............2711.001.00----1.00------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................TGGACATGGAAGGCAACGA.....................1911.001.00----1.00------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................CAACGAACAGGATCAGGACCAGTGG..2511.001.00------1.00----------------------------------------------------------------------------------------------------------
......TGAATGACTACAATGAGTCACCGGATGATG......................................................................................................................................................................................................................3011.001.00------1.00----------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................AGGTGGACATGGAAGGCAACG......................2111.001.00------------------------------------------------------------------------------------------------------1.00----------
........................................................................................................................................................ATCTGGGGCTGAGGCTGGCTGTGA..........................................................................2411.001.00--------------------------------------------------------------1.00--------------------------------------------------
........................................................................................................................................................ATCTGGGGCTGAGGCTGGCGA.............................................................................211.000.001.00----------------------------------------------------------------------------------------------------------------
.................AATGAGTCACCGGATGATGGAGAG.................................................................................................................................................................................................................2411.001.00---------------------------1.00-------------------------------------------------------------------------------------
................................................................................................................................................................................................................GGTGGACATGGAAGGCGGA.......................191.000.00--------------------------------------------------------------------------------------1.00--------------------------
.............................................................................................................................................................................................ACACCCAGCCTCCTCTCCAGGTGGACGG.................................281.000.00-----------------------------------------------------1.00-----------------------------------------------------------
........................................................................................................................................................ATCTGGGGCTGAGGCTGGCTGAAA..........................................................................2411.0026.00-----------------------------------------------------------------------------------------------1.00-----------------
.............................................................................................................................................................................................ACACCCAGCCTCCTCTCCAG.........................................2011.001.001.00----------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................TGGACATGGAAGGCAACGAACAGGAT..............2611.001.00------1.00----------------------------------------------------------------------------------------------------------
..........................................................................................................................................................CTGGGGCTGAGGCTGGCTGA............................................................................2011.001.00---1.00-------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................TCTGGGGCTGAGGCTGGCTA.............................................................................2011.001.00---1.00-------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................AACAGGATCAGGACCAGT....1811.001.00-------------------------------------------1.00---------------------------------------------------------------------
........................................................................................................................................................................................................................TGGAAGGCAACGAACAGGATCAGGAC........2611.001.00----------------------------------------------------1.00------------------------------------------------------------
............................................................................................................................................................................................CACACCCAGCCTCCTCTCCATTA.......................................231.000.001.00----------------------------------------------------------------------------------------------------------------
............................................................................................................................................................GGGGCTGAGGCTGGCGGAA...........................................................................191.000.00----------------------------------------------------1.00------------------------------------------------------------
............................................................................................................................................................GGGGCTGAGGCTGGCTGA............................................................................1821.001.00--1.00--------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................AACAGGATCAGGACCAG.....1711.001.00-------------------------1.00---------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................ATGGAAGGCAACGAACAGGATCAGG..........2511.001.00--------1.00--------------------------------------------------------------------------------------------------------
...........................................................GGGTATGGGGGAGGGC...............................................................................................................................................................................1620.500.50----------------------------------------------------------------------------------------------------------------0.50
................................................................................................................................................................................................................GGTGGACATGGAAGGCA.........................1720.500.50-------0.50---------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................CACACCCAGCCTCCTCTCC...........................................1930.330.330.33----------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................AGGATCAGGACCAGTG...1630.330.33------------------------------------------------------0.33----------------------------------------------------------

Antisense strand
ACGAGATGAATGACTACAATGAGTCACCGGATGATGGAGAGGTCAATGAGGTAGGCAAGGGGTATGGGGGAGGGCCTCTGTTCCTGGACCCTTGCTCCTGACCCAGTTGATGGCCAAGGGGTACAGAAACCCTGGATCCAGCCAGGGGCAGGATCTGGGGCTGAGGCTGGCTGAGGCCCCTCCCCACCCACACCCAGCCTCCTCTCCAGGTGGACATGGAAGGCAACGAACAGGATCAGGACCAGTGGAT
........................................................................((((((.((.((..((.((.(((..(((((((..(((.....))).)))).)))...((((((......))))))))))).))..)))).))))))(((....)))........................................................................
...............................................................64................................................................................................................178......................................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		SRR037938(GSM510476)
293Red. (cell line)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR189784SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR189787SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR038858(GSM458541)
MEL202. (cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038857(GSM458540)
D20. (cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR038856(GSM458539)
D11. (cell line)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR029124(GSM416753)
HeLa. (hela)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR029129(GSM416758)
SW480. (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)		SRR191631(GSM715741)
75genomic small RNA (size selected RNA from t. (breast)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR040031(GSM532916)
G013T. (cervix)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR040008(GSM532893)
G727N. (cervix)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR040039(GSM532924)
G531T. (cervix)		SRR038854(GSM458537)
MM653. (cell line)		SRR029126(GSM416755)
143B. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		TAX577744(Rovira)
total RNA. (breast)		SRR191585(GSM715695)
196genomic small RNA (size selected RNA from . (breast)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191399(GSM715509)
36genomic small RNA (size selected RNA from t. (breast)		SRR038853(GSM458536)
MELB. (cell line)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR038862(GSM458545)
MM472. (cell line)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191562(GSM715672)
82genomic small RNA (size selected RNA from t. (breast)		SRR033731(GSM497076)
h929 Cell line (h929). (B cell)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
............................................................................................................................AGAAACCCTGGATCCTGA............................................................................................................ 184.000.00-----4.00-----------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................CCTCCCCACCCACACAGAG..................................................... 191.000.00---------------------------------------------------------------------------------------1.00-------------------------
..........................................................................................................................................................................................CCCACACCCAGCCTCCTCTGTTT......................................... 231.000.00-----------------------------------------------------------1.00-----------------------------------------------------
.............................................................................................................................................................................................ACACCCAGCCTCCTCTCAG.......................................... 191.000.00--------------------1.00--------------------------------------------------------------------------------------------
........................................................................................................................................................................................CACCCACACCCAGCCTCTAA.............................................. 201.000.00---------------------------------------------------------------------------------------------1.00-------------------
......................................................GGCCCTCCCCCATACCCCTTGC.............................................................................................................................................................................. 2211.001.00---------------------------------------------------------1.00-------------------------------------------------------
.................................................................................................................................................................................TGGGTGTGGGTGGGGAGGG...................................................... 1920.500.50-----------------------------------------------------0.50-----------------------------------------------------------