ID: uc009yta.2_intron_0_0_chr11_71791932_f.5p
GENE: (1)
chr11:71791882-71792131+


(1)
AGO2.ip 		(11)
B-CELL 		(3)
BRAIN 		(16)
BREAST 		(24)
CELL-LINE 		(6)
CERVIX 		(3)
HEART 		(2)
HELA 		(5)
LIVER 		(1)
OTHER 		(1)
RRP40.ip 		(19)
SKIN 		(1)
TESTES 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
AGTAACCCTGAGGCAGTGGGACGCCAAGACTGGAGAGGAAGCGACTGCGGGTGAGTCGGGCGGGAAAACAGGAAACCCGTTCTAGGGGACAAGAGATCTATGGAGAAGGGAGGGGCACTCACAGAACGACTAAGAACCTTCCTGCTCGGGGATCTGAGATTTCCCCCACCGACCCTCATCACCTTTCACAGCGAACAAGATACAACACTCACATGGGACAGACTGGGCGAGGGGGAGCAGAGGGAGGGAT
.......................................................((((((((((....(((...((..(((((..(((.......))).)))))..))(((.....)))................))))))))))))).....................................................................................................
..................................................51...................................................................................................152................................................................................................
SizePerfect hitTotal NormPerfect NormSRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		TAX577739(Rovira)
total RNA. (breast)		SRR553576(SRX182782)
source: Testis. (testes)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR189784SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR189782SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		TAX577579(Rovira)
total RNA. (breast)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR038860(GSM458543)
MM426. (cell line)		TAX577580(Rovira)
total RNA. (breast)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR040024(GSM532909)
G613N. (cervix)		TAX577745(Rovira)
total RNA. (breast)		SRR033731(GSM497076)
h929 Cell line (h929). (B cell)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040040(GSM532925)
G612N. (cervix)		GSM359202(GSM359202)
hepg2_untreated_a. (cell line)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)		SRR191633(GSM715743)
85genomic small RNA (size selected RNA from t. (breast)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)		SRR029129(GSM416758)
SW480. (cell line)		SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040016(GSM532901)
G645N. (cervix)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)		SRR029128(GSM416757)
H520. (cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR038858(GSM458541)
MEL202. (cell line)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191403(GSM715513)
44genomic small RNA (size selected RNA from t. (breast)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191620(GSM715730)
167genomic small RNA (size selected RNA from . (breast)		SRR040025(GSM532910)
G613T. (cervix)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577742(Rovira)
total RNA. (breast)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR189786SRR029132(GSM416761)
MB-MDA231. (cell line)		TAX577744(Rovira)
total RNA. (breast)		TAX577589(Rovira)
total RNA. (breast)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		TAX577453(Rovira)
total RNA. (breast)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040020(GSM532905)
G699N_2. (cervix)		SRR038862(GSM458545)
MM472. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		SRR191562(GSM715672)
82genomic small RNA (size selected RNA from t. (breast)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577743(Rovira)
total RNA. (breast)		SRR029125(GSM416754)
U2OS. (cell line)		SRR040010(GSM532895)
G529N. (cervix)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
............................................................................................................................AACGACTAAGAACCTTCCTGCATC......................................................................................................24110.002.00-10.00---------------------------------------------------------------------------------------------
..........................AGACTGGAGAGGAAGCGA..............................................................................................................................................................................................................1815.005.00-------1.00------1.00---1.00----------1.00---------1.00-------------------------------------------------------
............................................CTGCGGGTGAGTCGGGCGGGAA........................................................................................................................................................................................2214.004.00---------------------1.00---2.00-----------------------------------1.00---------------------------------
.........................AAGACTGGAGAGGAAGCGAC.............................................................................................................................................................................................................2014.004.00-----------------1.00--------2.00-----------------------1.00--------------------------------------------
.........................AAGACTGGAGAGGAAGCGA..............................................................................................................................................................................................................1914.004.00--1.00-----------------------------1.00------------------------------------------1.00----1.00--------------
........................CAAGACTGGAGAGGAAGCGAC.............................................................................................................................................................................................................2114.004.003.00---------------1.00------------------------------------------------------------------------------
...................................AGGAAGCGACTGCGGGGA.....................................................................................................................................................................................................183.000.00-------3.00---------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................ACAGACTGGGCGAGGGGAGCA............213.000.00---------------3.00-------------------------------------------------------------------------------
..........................................GACTGCGGGTGAGTCGGGCGGGAAAA......................................................................................................................................................................................2612.002.002.00----------------------------------------------------------------------------------------------
......................GCCAAGACTGGAGAGGAAG.................................................................................................................................................................................................................1912.002.00---1.00-------------------------------------1.00-----------------------------------------------------
............................................................................................................................AACGACTAAGAACCTTCCTGC.........................................................................................................2112.002.00-----1.00-------------1.00---------------------------------------------------------------------------
...AACCCTGAGGCAGTGGGA.....................................................................................................................................................................................................................................1812.002.00---------------------------1.00----------------------------------------------------------1.00--------
..................................................................................TAGGGGACAAGAGATCTA......................................................................................................................................................1812.002.001.00-----------1.00----------------------------------------------------------------------------------
...............................................................................TTCTAGGGGACAAGAGAT.........................................................................................................................................................1812.002.00----------------------------1.00-----------------------------------1.00------------------------------
....................ACGCCAAGACTGGAGAGGAAGCGACTGC..........................................................................................................................................................................................................2812.002.00--------2.00--------------------------------------------------------------------------------------
.....................................................................................................................CTCACAGAACGACTAAGAAC.................................................................................................................2012.002.00---------2.00-------------------------------------------------------------------------------------
......................GCCAAGACTGGAGAGGAAGC................................................................................................................................................................................................................2012.002.00-----------1.00-------------------1.00---------------------------------------------------------------
.............................CTGGAGAGGAAGCGACTGC..........................................................................................................................................................................................................1912.002.00----------------1.00-----------------------------1.00------------------------------------------------
...................................AGGAAGCGACTGCGGGTG.....................................................................................................................................................................................................1812.002.00--1.00--------------------------------------------------------------------1.00-----------------------
.........................AAGACTGGAGAGGAAGCGACT............................................................................................................................................................................................................2112.002.00-------------------------------1.00--------------------------------------------------1.00------------
.............................CTGGAGAGGAAGCGACTG...........................................................................................................................................................................................................1812.002.00--------------------------------------------1.00------------------1.00-------------------------------
..................................................................................................................................................................................................ACAAGATACAACACTCACAT....................................2012.002.00-------------------------------------------------------1.00--------------1.00------------------------
.......................................................................................................................CACAGAACGACTAAGAAC.................................................................................................................1812.002.00----2.00------------------------------------------------------------------------------------------
......................................AAGCGACTGCGGGTGAGTCGGGCGGGAAAACAGGA.................................................................................................................................................................................3512.002.00--------2.00--------------------------------------------------------------------------------------
..........................AGACTGGAGAGGAAGCGACTGC..........................................................................................................................................................................................................2212.002.00----------------------------------------1.00-------------------------------------------1.00----------
.........................AAGACTGGAGAGGAAGCG...............................................................................................................................................................................................................1812.002.00-----------------------2.00-----------------------------------------------------------------------
..............................................GCGGGTGAGTCGGGCGGGAA........................................................................................................................................................................................2012.002.00------------1.00--------------------------------1.00-------------------------------------------------
............................................................................................................................AACGACTAAGAACCTTCC............................................................................................................1812.002.00----1.00------------------------------------------------------1.00-----------------------------------
.............................................................................................................................ACGACTAAGAACCTTCCTG..........................................................................................................1912.002.002.00----------------------------------------------------------------------------------------------
................................................................................TCTAGGGGACAAGAGATCTA......................................................................................................................................................2012.002.002.00----------------------------------------------------------------------------------------------
..........................................................................................................................................TTCCTGCTCGGGGATCACTG............................................................................................202.000.00------2.00----------------------------------------------------------------------------------------
.........................AAGACTGGAGAGGAAGCGACTGCG.........................................................................................................................................................................................................2412.002.00---1.00--------------1.00----------------------------------------------------------------------------
........................CAAGACTGGAGAGGAAGCGACTGCG.........................................................................................................................................................................................................2512.002.00---2.00-------------------------------------------------------------------------------------------
...................................................................................................ATGGAGAAGGGAGGGGCA.....................................................................................................................................1821.501.50---------------------0.50---------------------------------------------------------------------0.50-0.50-
...........................GACTGGAGAGGAAGCGACTGC..........................................................................................................................................................................................................2111.001.00--------------------1.00--------------------------------------------------------------------------
.......................................................................................................................CACAGAACGACTAAGAA..................................................................................................................1711.001.00--1.00--------------------------------------------------------------------------------------------
...............GTGGGACGCCAAGACTGG.........................................................................................................................................................................................................................1811.001.00---------------------1.00-------------------------------------------------------------------------
......................................................GTCGGGCGGGAAAACAGGAC................................................................................................................................................................................201.000.00-----1.00-----------------------------------------------------------------------------------------
.............................................TGCGGGTGAGTCGGGCGGGAA........................................................................................................................................................................................2111.001.00--------------------------------------------------------1.00--------------------------------------
..................GGACGCCAAGACTGGAGAGGAAG.................................................................................................................................................................................................................2311.001.00------------------------1.00----------------------------------------------------------------------
...........................................................................................................................................TCCTGCTCGGGGATCTGAG............................................................................................1911.001.00--------------------------------------------------------------1.00--------------------------------
....................ACGCCAAGACTGGAGAGGAAGCG...............................................................................................................................................................................................................2311.001.00--------------1.00--------------------------------------------------------------------------------
............GCAGTGGGACGCCAAGACTGG.........................................................................................................................................................................................................................2111.001.00-----------------------------------------------------------------------------------1.00-----------
............................................................................................................................AACGACTAAGAACCTTCCTGCTCGGGGA..................................................................................................2811.001.00-----1.00-----------------------------------------------------------------------------------------
...AACCCTGAGGCAGTGGGACGCC.................................................................................................................................................................................................................................2211.001.00-------------------1.00---------------------------------------------------------------------------
........................CAAGACTGGAGAGGAAGCGACTGCGG........................................................................................................................................................................................................2611.001.00---1.00-------------------------------------------------------------------------------------------
.....................................................................................................................CTCACAGAACGACTAAGAACCTTC.............................................................................................................2411.001.00-----------------------------------------------------1.00-----------------------------------------
............................................................................................................................AACGACTAAGAACCTTCCTG..........................................................................................................2011.001.00----------------------------------------------------------------------------1.00------------------
.................................................................................................................GGCACTCACAGAACGACTAAGAACC................................................................................................................2511.001.00----------------------------------------------------------------------------------------1.00------
........................CAAGACTGGAGAGGAAGCGA..............................................................................................................................................................................................................2011.001.00--1.00--------------------------------------------------------------------------------------------
...................................AGGAAGCGACTGCGGGTGA....................................................................................................................................................................................................1911.001.00----------------------------------1.00------------------------------------------------------------
......................................................................................................................TCACAGAACGACTAAGAAC.................................................................................................................1911.001.00------------------1.00----------------------------------------------------------------------------
...................................................................................................................................................................................................................CATGGGACAGACTGGGCGAGG..................2111.001.00-----1.00-----------------------------------------------------------------------------------------
...........................GACTGGAGAGGAAGCGA..............................................................................................................................................................................................................1711.001.00------------------------------------------1.00----------------------------------------------------
.....................................................................................................................................................................................................................................AGGGGGAGCAGAGGGAAAAG.201.000.00-------------1.00---------------------------------------------------------------------------------
......................GCCAAGACTGGAGAGGAAGCGACT............................................................................................................................................................................................................2411.001.00---------------------------------1.00-------------------------------------------------------------
......................GCCAAGACTGGAGAGGAAGCGAC.............................................................................................................................................................................................................2311.001.00-----------------------------------------------------------------1.00-----------------------------
.........................................................................................................................CAGAACGACTAAGAACCTTCCTGCTCGGA....................................................................................................291.000.00--------------------1.00--------------------------------------------------------------------------
................TGGGACGCCAAGACTGGAGAGGAAG.................................................................................................................................................................................................................2511.001.00---------------------------------------------------1.00-------------------------------------------
...........................................................................................................................................TCCTGCTCGGGGATCTGA.............................................................................................1811.001.00---------------------------1.00-------------------------------------------------------------------
...............................................................................TTCTAGGGGACAAGAGA..........................................................................................................................................................1711.001.00---------1.00-------------------------------------------------------------------------------------
......................................................................................................................TCACAGAACGACTAAGAACCTTG.............................................................................................................231.000.00-----1.00-----------------------------------------------------------------------------------------
............................................................................................................................AACGACTAAGAACCTTCCTGCTCGG.....................................................................................................2511.001.00-----------------------------------------------------------------------------------------1.00-----
...................................................................................AGGGGACAAGAGATCTATGGA..................................................................................................................................................2111.001.00---------------------------------------------------------1.00-------------------------------------
................................................................................................TCTATGGAGAAGGGAGGGGCA.....................................................................................................................................2111.001.00-------------------------------------------------1.00---------------------------------------------
............................ACTGGAGAGGAAGCGACTG...........................................................................................................................................................................................................1911.001.00------------------------------------------------1.00----------------------------------------------
.....................................GAAGCGACTGCGGGTGAGTCGGG..............................................................................................................................................................................................2311.001.00-----------------------------1.00-----------------------------------------------------------------
..............................................GCGGGTGAGTCGGGCGGG..........................................................................................................................................................................................1811.001.00-------------------------------------1.00---------------------------------------------------------
...........................GACTGGAGAGGAAGCGAC.............................................................................................................................................................................................................1811.001.00------------------------1.00----------------------------------------------------------------------
........................................................................................................................ACAGAACGACTAAGAACCTT..............................................................................................................2011.001.00-------------------1.00---------------------------------------------------------------------------
...................................AGGAAGCGACTGCGGGTGAGT..................................................................................................................................................................................................2111.001.00-------------------------------------------------------------------------------------1.00---------
..........AGGCAGTGGGACGCCAAGACTG..........................................................................................................................................................................................................................2211.001.00----------------------1.00------------------------------------------------------------------------
.................................................................................................CTATGGAGAAGGGAGGGGCAC....................................................................................................................................2111.001.00-----------------------------------------------------------------------------1.00-----------------
..........................AGACTGGAGAGGAAGCGACTGCGG........................................................................................................................................................................................................2411.001.00---------------------------------------------------------------------------------1.00-------------
....................................................GAGTCGGGCGGGAAAACAGGAAACC.............................................................................................................................................................................2511.001.00----1.00------------------------------------------------------------------------------------------
.....................CGCCAAGACTGGAGAGGAAGCG...............................................................................................................................................................................................................2211.001.00------------------------------------------------------------------------------1.00----------------
..............AGTGGGACGCCAAGACTGGAGAGGA...................................................................................................................................................................................................................2511.001.00--------------------------------------------------------------------1.00--------------------------
..............AGTGGGACGCCAAGACTG..........................................................................................................................................................................................................................1811.001.00-------1.00---------------------------------------------------------------------------------------
............................ACTGGAGAGGAAGCGACT............................................................................................................................................................................................................1811.001.00----------------------------------------------------------1.00------------------------------------
..........................................................................................AAGAGATCTATGGAGAAGGGA...........................................................................................................................................2111.001.00-----1.00-----------------------------------------------------------------------------------------
....................ACGCCAAGACTGGAGAGGAAGCGACTGCGT........................................................................................................................................................................................................301.000.00---1.00-------------------------------------------------------------------------------------------
.......................CCAAGACTGGAGAGGAAGC................................................................................................................................................................................................................1911.001.00------------------------------------------------------------------1.00----------------------------
........................CAAGACTGGAGAGGAAGC................................................................................................................................................................................................................1811.001.00--1.00--------------------------------------------------------------------------------------------
...................................................................................................ATGGAGAAGGGAGGGGCAC....................................................................................................................................1911.001.00------------------------------------------------------------1.00----------------------------------
............................................................................................................................AACGACTAAGAACCTTCCTGCTCGGG....................................................................................................2611.001.00------------------------------------------------------------------------1.00----------------------
.................................................................................CTAGGGGACAAGAGATCT.......................................................................................................................................................1811.001.001.00----------------------------------------------------------------------------------------------
......................GCCAAGACTGGAGAGGAAGCGA..............................................................................................................................................................................................................2211.001.00--1.00--------------------------------------------------------------------------------------------
.................................................................AAACAGGAAACCCGTTCGT......................................................................................................................................................................191.000.00----------------------------1.00------------------------------------------------------------------
.........................AAGACTGGAGAGGAAGCGACTG...........................................................................................................................................................................................................2211.001.00--------------------------------------1.00--------------------------------------------------------
...........................................ACTGCGGGTGAGTCGGG..............................................................................................................................................................................................1711.001.00-----------------1.00-----------------------------------------------------------------------------
.......................................................................................GACAAGAGATCTATGGAGAA...............................................................................................................................................2011.001.00-----------------------------------1.00-----------------------------------------------------------
................................................................................................................GGGCACTCACAGAACGAC........................................................................................................................1811.001.00----1.00------------------------------------------------------------------------------------------
.....CCCTGAGGCAGTGGGACGCCA................................................................................................................................................................................................................................2111.001.00------------------------------1.00----------------------------------------------------------------
............................................................................................................................................CCTGCTCGGGGATCTGAGAT..........................................................................................2011.001.00-------------------------------------------------------------------1.00---------------------------
.......................CCAAGACTGGAGAGGAAGCGACTGC..........................................................................................................................................................................................................2511.001.00---1.00-------------------------------------------------------------------------------------------
....ACCCTGAGGCAGTGGGACGCCAA...............................................................................................................................................................................................................................2311.001.00----------------------------------------------------1.00------------------------------------------
..........................AGACTGGAGAGGAAGCGAC.............................................................................................................................................................................................................1911.001.00-------------------------------------------1.00---------------------------------------------------
..........................................................................................AAGAGATCTATGGAGAAGGGAGGGGCA.....................................................................................................................................2711.001.00----------1.00------------------------------------------------------------------------------------
............................................CTGCGGGTGAGTCGGGCGGGA.........................................................................................................................................................................................2111.001.00------------------------------------1.00----------------------------------------------------------
.......................................................................................................................CACAGAACGACTAAGAACCTT..............................................................................................................2111.001.00-------------------------------------------------------------------------1.00---------------------
...............................................................................TTCTAGGGGACAAGAGATCTA......................................................................................................................................................2111.001.00--1.00--------------------------------------------------------------------------------------------
....................................................................................................................ACTCACAGAACGACTAAGAACC................................................................................................................2211.001.00----------1.00------------------------------------------------------------------------------------
..........................................................................................................................AGAACGACTAAGAACC................................................................................................................1611.001.00-----------1.00-----------------------------------------------------------------------------------
.......................CCAAGACTGGAGAGGAAGCGAC.............................................................................................................................................................................................................2211.001.00------------------------------------------------------1.00----------------------------------------
..............AGTGGGACGCCAAGACTGGAGAG.....................................................................................................................................................................................................................2311.001.00--------------------------------------------------------------------------1.00--------------------
...................GACGCCAAGACTGGAGAGGAAGC................................................................................................................................................................................................................2311.001.00--1.00--------------------------------------------------------------------------------------------
.....................................GAAGCGACTGCGGGTGCG...................................................................................................................................................................................................181.000.00-------------------------------------------------------------------------------1.00---------------
..............................................................................................................AGGGGCACTCACAGAACGAC........................................................................................................................2011.001.00--------------------1.00--------------------------------------------------------------------------
................TGGGACGCCAAGACTGGA........................................................................................................................................................................................................................1811.001.00------------1.00----------------------------------------------------------------------------------
.............................................................................................................................................CTGCTCGGGGATCTGAGAT..........................................................................................1911.001.00----------------1.00------------------------------------------------------------------------------
......................GCCAAGACTGGAGAGGAAGCGACTGCGG........................................................................................................................................................................................................2811.001.00----------------------1.00------------------------------------------------------------------------
...........................................................................CCCGTTCTAGGGGACAAG.............................................................................................................................................................1811.001.00----1.00------------------------------------------------------------------------------------------
...............GTGGGACGCCAAGACTGGAGAGGAAGC................................................................................................................................................................................................................2711.001.00--------------1.00--------------------------------------------------------------------------------
............................................................................CCGTTCTAGGGGACAAGAGATCTA......................................................................................................................................................2411.001.00---------------------------------------------------------------------------------------1.00-------
.........GAGGCAGTGGGACGCCAAGACTG..........................................................................................................................................................................................................................2311.001.00------------------------------1.00----------------------------------------------------------------
............................................................................................................GGAGGGGCACTCACAGAACGACTAAGAACC................................................................................................................3011.001.00----------1.00------------------------------------------------------------------------------------
...................................................................................................ATGGAGAAGGGAGGGGCACTCACAGAAC...........................................................................................................................2811.001.00------------------------------------------------------------------------------------------1.00----
................................................................................................................................ACTAAGAACCTTCCTGCT........................................................................................................1820.500.50--------------------------------------------------------------------------------------------0.50--
...............................GGAGAGGAAGCGACT............................................................................................................................................................................................................1530.330.33----------------------------------------------------------------------------------------------0.33

Antisense strand
AGTAACCCTGAGGCAGTGGGACGCCAAGACTGGAGAGGAAGCGACTGCGGGTGAGTCGGGCGGGAAAACAGGAAACCCGTTCTAGGGGACAAGAGATCTATGGAGAAGGGAGGGGCACTCACAGAACGACTAAGAACCTTCCTGCTCGGGGATCTGAGATTTCCCCCACCGACCCTCATCACCTTTCACAGCGAACAAGATACAACACTCACATGGGACAGACTGGGCGAGGGGGAGCAGAGGGAGGGAT
.......................................................((((((((((....(((...((..(((((..(((.......))).)))))..))(((.....)))................))))))))))))).....................................................................................................
..................................................51...................................................................................................152................................................................................................
SizePerfect hitTotal NormPerfect NormSRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		TAX577739(Rovira)
total RNA. (breast)		SRR553576(SRX182782)
source: Testis. (testes)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR189784SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR189782SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		TAX577579(Rovira)
total RNA. (breast)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR038860(GSM458543)
MM426. (cell line)		TAX577580(Rovira)
total RNA. (breast)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR040024(GSM532909)
G613N. (cervix)		TAX577745(Rovira)
total RNA. (breast)		SRR033731(GSM497076)
h929 Cell line (h929). (B cell)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040040(GSM532925)
G612N. (cervix)		GSM359202(GSM359202)
hepg2_untreated_a. (cell line)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)		SRR191633(GSM715743)
85genomic small RNA (size selected RNA from t. (breast)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)		SRR029129(GSM416758)
SW480. (cell line)		SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040016(GSM532901)
G645N. (cervix)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)		SRR029128(GSM416757)
H520. (cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR038858(GSM458541)
MEL202. (cell line)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191403(GSM715513)
44genomic small RNA (size selected RNA from t. (breast)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191620(GSM715730)
167genomic small RNA (size selected RNA from . (breast)		SRR040025(GSM532910)
G613T. (cervix)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577742(Rovira)
total RNA. (breast)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR189786SRR029132(GSM416761)
MB-MDA231. (cell line)		TAX577744(Rovira)
total RNA. (breast)		TAX577589(Rovira)
total RNA. (breast)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		TAX577453(Rovira)
total RNA. (breast)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040020(GSM532905)
G699N_2. (cervix)		SRR038862(GSM458545)
MM472. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		SRR191562(GSM715672)
82genomic small RNA (size selected RNA from t. (breast)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577743(Rovira)
total RNA. (breast)		SRR029125(GSM416754)
U2OS. (cell line)		SRR040010(GSM532895)
G529N. (cervix)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
..........................................................................................................................................................................................................CAACACTCACATGGGGTTA............................. 191.000.00-------------1.00---------------------------------------------------------------------------------
......................................................................................................................................................................................................................................GGGGGAGCAGAGGGACGC.. 181.000.00-----------------1.00-----------------------------------------------------------------------------
.................................................................................................................................................ATCTCAGATCCCCGA.......................................................................................... 1511.001.00-----------1.00-----------------------------------------------------------------------------------
.....................................................AGTCGGGCGGGAAAACG.................................................................................................................................................................................... 171.000.00------1.00----------------------------------------------------------------------------------------
......................................................GTCGGGCGGGAAAACGG................................................................................................................................................................................... 171.000.00------1.00----------------------------------------------------------------------------------------
......................................................GTCGGGCGGGAAAACCG................................................................................................................................................................................... 171.000.00-------------1.00---------------------------------------------------------------------------------
......................................................GTCGGGCGGGAAAACGT................................................................................................................................................................................... 171.000.00------1.00----------------------------------------------------------------------------------------
........................................................GTTTCCTGTTTTCCCGCCCG.............................................................................................................................................................................. 2011.001.00-----------------------------------------------1.00-----------------------------------------------
......................................................GTCGGGCGGGAAAACGGTC................................................................................................................................................................................. 191.000.00---------------------------------------------------------------------1.00-------------------------