ID: uc009yrb.1_intron_1_0_chr11_66049825_f
GENE: CNIH2(2)
chr11:66049775-66050253+


(1)
AGO2.ip
(17)
B-CELL
(1)
BRAIN
(8)
BREAST
(13)
CELL-LINE
(11)
CERVIX
(1)
HEART
(2)
HELA
(5)
LIVER
(3)
OTHER
(20)
SKIN
(2)
UTERUS
(1)
XRN.ip

Sense strand
GACCAGGGGAACCCTGCGCGGGCAGTAAGTGATACATGTGCTGTGCCGAGGTGTGTCCGTCCGTCTGTCTTTCCATCTGTCGTGGGCTGGGGGTGGGAGACGGGAAGACGGGGGTGGGGTGGGGGGCCTACGGCCATGCCCCCTTCCTCTCTGTCTCCGCCCCCAGCAAACACCTGGCGCGGGCTCAGGGCTGAGTTCCTCTTGGCGGGGCGGTGGTTGCCAGGCTCTGGGCCGTTGCCATGGAGACGCGGGTGAAGGCCCTTCCATGGTGACGGTCGCCATGGGGACGGCGCGGCTGCTTCCCGGCCGTGCCGACAGTGCCGCAGAGATCGCTCTGGCGCCCCCTGGCGGCCACATGTGGAGCGGTGGGAGCTGCTCCAGTACCTGCTTCTCCGCCACCCCATCGCGGCCTTTTCCTTCCCCCAACAGCGCGAGCGTTTAAAAAACATCGAACGCATCTGCTGCCTCCTGAGGAAGGT
........................................................................................................................(((..((....((((..(((((........(((..(((((..((((.......)))).)))))..))).((..((.....))..))))))).((.(((.((((((....((((((..((((((((....((((....))))))))))))..))))))))).))).))).))..))))))..)))...............................................................................................................................................................................
........................................................................................................................121.......................................................................................................................................................................................307..........................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR040020(GSM532905)
G699N_2. (cervix)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR040034(GSM532919)
G001N. (cervix)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR040018(GSM532903)
G701N. (cervix)
TAX577580(Rovira)
total RNA. (breast)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR189785SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577741(Rovira)
total RNA. (breast)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR038859(GSM458542)
MM386. (cell line)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR040032(GSM532917)
G603N. (cervix)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR033731(GSM497076)
h929 Cell line (h929). (B cell)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR015365(GSM380330)
Memory B cells (MM139). (B cell)
SRR040042(GSM532927)
G428N. (cervix)
SRR343334SRR191574(GSM715684)
78genomic small RNA (size selected RNA from t. (breast)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR189784SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR040041(GSM532926)
G612T. (cervix)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040010(GSM532895)
G529N. (cervix)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)
TAX577746(Rovira)
total RNA. (breast)
SRR040019(GSM532904)
G701T. (cervix)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR040037(GSM532922)
G243T. (cervix)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR189783SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040036(GSM532921)
G243N. (cervix)
SRR189782SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
TAX577739(Rovira)
total RNA. (breast)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR029126(GSM416755)
143B. (cell line)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR343335SRR330918(SRX091756)
tissue: normal skindisease state: normal. (skin)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577744(Rovira)
total RNA. (breast)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)
SRR040035(GSM532920)
G001T. (cervix)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR189787
.............................................................................................................................GCCTACGGCCATGCCACC................................................................................................................................................................................................................................................................................................................................................1812.000.00----------2.00-4.00-1.00--1.00------1.00--1.00-----------------------------------------------1.00------1.00-------
..............................................................................................................................................................................................................................................................................................ACGGCGCGGCTGCTTCG................................................................................................................................................................................1712.000.004.00----7.00-1.00----------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................CGGCGCGGCTGCTTCGTT..............................................................................................................................................................................18211.000.503.006.00-------------------------------1.00----------------------------------------1.00---------------
...............................................................................................................................................................................................................................................................................................CGGCGCGGCTGCTTCGTTG.............................................................................................................................................................................19210.000.501.002.006.00----------------------------------------------------------------------1.00----------------
.............................................................................................................................................................................................................................................................................................GACGGCGCGGCTGCTTCG................................................................................................................................................................................18110.0010.003.005.00--------------------------1.00---------------------------1.00---------------------------------
.............................................................................................................................................................................................................................................................................................GACGGCGCGGCTGCTTC.................................................................................................................................................................................17110.0010.005.00----1.00-3.00---------------------------------------------1.00------------------------------------
............................................................................................................................................................................................................................................................................................GGACGGCGCGGCTGCTTC.................................................................................................................................................................................18110.0010.0010.00-----------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................GGACGGCGCGGCTGCTT..................................................................................................................................................................................1729.009.007.00------1.50-----------------------------0.50----------------------------------------------------
...............................................................................................................................................................................................................................................................................................CGGCGCGGCTGCTTCGGTG.............................................................................................................................................................................1927.000.50--------5.00----------------1.00----------------------------------------1.00-----------------------
.............................................................................................................................................................................................................................................................................................GACGGCGCGGCTGCTTCGTTG.............................................................................................................................................................................2115.0010.00--5.00---------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................GGACGGCGCGGCTGCTTCG................................................................................................................................................................................1915.0010.002.00-------------1.00-----------------1.001.00--------------------------------------------------------
............................................................................................................................................................................................................................................................................................GGACGGCGCGGCTGCTTTGTT..............................................................................................................................................................................2124.009.00---4.00--------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................ACGGCGCGGCTGCTTCGTT..............................................................................................................................................................................194.000.00-3.00---1.00------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................ACGGCGCGGCTGCTT..................................................................................................................................................................................1523.503.50-----------1.00---2.50--------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................ACGGCGCGGCTGCTTCGT...............................................................................................................................................................................183.000.00----------------------1.00---------1.00-------------------------------------------1.00-------------
..............................................................................................................................................................................................................................................................................................ACGGCGCGGCTGCTTTGTT..............................................................................................................................................................................1923.003.501.00--1.00---------1.00----------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................GACGGCGCGGCTGCTCTG................................................................................................................................................................................183.000.00---3.00--------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................GACGGCGCGGCTGCTTCGT...............................................................................................................................................................................1913.0010.00-2.00--------------------------------1.00-------------------------------------------------------
.............................................................................................................................................................................................................................................................................................GACGGCGCGGCTGCTCCG................................................................................................................................................................................183.000.00-----------------------------------------1.00----------------------1.00------1.00------------------
............................................................................................................................................................................................................................................................................................GGACGGCGCGGCTGCTTTG................................................................................................................................................................................1923.009.00---1.00-------------------------------1.00-1.00----------------------------------------------------
.............................................................................................................................GCCTACGGCCATGCCCCC................................................................................................................................................................................................................................................................................................................................................1813.003.00----------3.00-------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................GACGGCGCGGCTGCTTT.................................................................................................................................................................................1722.001.001.00-----------------------1.00-----------------------------------------------------------------
.....................................................................................................................................................TCTGTCTCCGCCCCCCGGC.......................................................................................................................................................................................................................................................................................................................192.000.00--------------------------1.00--------------------------------------------------1.00------------
............................................................................................................................................................................................................................................................................................GGACGGCGCGGCTGCTC..................................................................................................................................................................................1722.000.501.00-------------------------------------------------------------1.00---------------------------
.............................................................................................................................GCCTACGGCCATGCCGCC................................................................................................................................................................................................................................................................................................................................................182.000.00---------------------------1.00-------------------------------------------------------1.00------
............................................................................................................................................................................................................................................................................................GGACGGCGCGGCTGCTTCA................................................................................................................................................................................1912.0010.00---2.00--------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................ACGGCGCGGCTGCTTCGGTG.............................................................................................................................................................................202.000.002.00-----------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................GACGGCGCGGCTGCTCTGT...............................................................................................................................................................................192.000.001.00----------------------1.00------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................GACGGCGCGGCTGCTTCC................................................................................................................................................................................1812.002.001.00---------------------------1.00-------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................GACGGCGCGGCTGCTC..................................................................................................................................................................................162.000.00-----------2.00------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................GACGGCGCGGCTGCTTTGT...............................................................................................................................................................................1921.001.00-----------------------------------------------------------------1.00------------------------
......................................................................................................................................................CTGTCTCCGCCCCCAGTCC......................................................................................................................................................................................................................................................................................................................191.000.00----------------------------------------------1.00-------------------------------------------
............................................................................................................................................................................................................................................................................................GGACGGCGCGGCTGCTTT.................................................................................................................................................................................1821.009.00-------1.00----------------------------------------------------------------------------------
.......................................................................................................................................................TGTCTCCGCCCCCAGGCC......................................................................................................................................................................................................................................................................................................................181.000.00-------------------------------------------------------------1.00----------------------------
................CGCGGGCAGTAAGTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................1511.001.00-------------------------1.00----------------------------------------------------------------
..................................CATGTGCTGTGCCGAGGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00----------------------------------------------------------1.00-------------------------------
..................................CATGTGCTGTGCCGAGGTGTGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001.00-------------------------------------------1.00----------------------------------------------
...............................................................................................................................................................................................................................................................AGGCCCTTCCATGGTGA...............................................................................................................................................................................................................1711.001.00----------------------------------------1.00-------------------------------------------------
..........................................................................................................................GGGGCCTACGGCCATACC...................................................................................................................................................................................................................................................................................................................................................181.000.00------------------------------------------------------------------------------------1.00-----
............................................................................................................................................................................................................................................................................................GGACGGCGCGGCTGCTCCGT...............................................................................................................................................................................2021.000.50---------------------------------------------------------1.00--------------------------------
.............................................................................................................................................................................................................................................................................................GACGGCGCGGCTGCTCTTT...............................................................................................................................................................................191.000.00-----------------------1.00------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................GACGGCGCGGCTGCTAA.................................................................................................................................................................................171.000.001.00-----------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................ACGGCGCGGCTGCTTCGG...............................................................................................................................................................................181.000.00-------------------------------------------------------------------------------------1.00----
................................................................................................................................................................................................................................................................................................GGCGCGGCTGCTTCCCCGA............................................................................................................................................................................191.000.00-------1.00----------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................GGACGGCGCGGCTGCTCCG................................................................................................................................................................................1921.000.501.00-----------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................GACGGCGCGGCTGCTTCGCTG.............................................................................................................................................................................2111.0010.001.00-----------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................GGACGGCGCGGCTGCTTTGT...............................................................................................................................................................................2021.009.00-----------------------------------1.00------------------------------------------------------
..............................................................................................................................................................................................................................................................................................ACGGCGCGGCTGCTTTG................................................................................................................................................................................1721.003.50-----1.00------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................GTGGAGCGGTGGGAGATCC.......................................................................................................191.000.00-----------------------------------------------1.00------------------------------------------
.............................................................................................................................GCCTACGGCCATGCCCCCCT..............................................................................................................................................................................................................................................................................................................................................2011.003.00----------------------------------1.00-------------------------------------------------------
....AGGGGAACCCTGCGCGGGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001.00---------------------1.00--------------------------------------------------------------------
.............................................................................................................................GCCTACGGCCATGCCTCC................................................................................................................................................................................................................................................................................................................................................181.000.00--------------------------------------------1.00---------------------------------------------
..................................................................................................................................................................................GCGGGCTCAGGGCTGACG...........................................................................................................................................................................................................................................................................................181.000.00-------------------------------------------------------1.00----------------------------------
.............................................................................................................................................................................................................................................................................................GACGGCGCGGCTGCTTTT................................................................................................................................................................................1821.001.00------------------------------------1.00-----------------------------------------------------
.............................................................................................................................................................................................................................................................................................GACGGCGCGGCTGCTTTG................................................................................................................................................................................1821.001.00------------------------------------1.00-----------------------------------------------------
............................................................................................................................................................................................................................................................................................GGACGGCGCGGCTGCTTCGT...............................................................................................................................................................................2011.0010.00----------------------1.00-------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................GGACGGCGCGGCTGCCT..................................................................................................................................................................................171.000.001.00-----------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................GGACGGCGCGGCTGCCTCG................................................................................................................................................................................191.000.001.00-----------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................GGACGGCGCGGCTGCAA..................................................................................................................................................................................171.000.001.00-----------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................GACGGCGCGGCTGCTT..................................................................................................................................................................................1621.001.00---------------------------------------1.00--------------------------------------------------
...............................................................................................................................................................................................................................................................................................CGGCGCGGCTGCTTCAGAG.............................................................................................................................................................................1921.000.50--------1.00---------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................CCCTTCCATGGTGACGGTC..........................................................................................................................................................................................................1911.001.00---------------------------------------------------------------------------------------1.00--
........................................................................................................................................................................AACACCTGGCGCGGGAGTA....................................................................................................................................................................................................................................................................................................191.000.00------------------1.00-----------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................ACGGCGCGGCTGCTTT.................................................................................................................................................................................1621.003.50-----------1.00------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................GGACGGCGCGGCTGCTTCC................................................................................................................................................................................1911.001.001.00-----------------------------------------------------------------------------------------
.............................................................................................................................GCCTACGGCCATGCCATC................................................................................................................................................................................................................................................................................................................................................181.000.00-----------------1.00------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................CGGCGCGGCTGCTTCGGAG.............................................................................................................................................................................1921.000.50--------1.00---------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................GGACGGCGCGGCTGCT...................................................................................................................................................................................1620.500.50-----------0.50------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................CGGCGCGGCTGCTTC.................................................................................................................................................................................1520.500.50--------------0.50---------------------------------------------------------------------------
...........................................................................................................ACGGGGGTGGGGTGGGGGG.................................................................................................................................................................................................................................................................................................................................................................1940.250.25----------------0.25-------------------------------------------------------------------------

Antisense strand
GACCAGGGGAACCCTGCGCGGGCAGTAAGTGATACATGTGCTGTGCCGAGGTGTGTCCGTCCGTCTGTCTTTCCATCTGTCGTGGGCTGGGGGTGGGAGACGGGAAGACGGGGGTGGGGTGGGGGGCCTACGGCCATGCCCCCTTCCTCTCTGTCTCCGCCCCCAGCAAACACCTGGCGCGGGCTCAGGGCTGAGTTCCTCTTGGCGGGGCGGTGGTTGCCAGGCTCTGGGCCGTTGCCATGGAGACGCGGGTGAAGGCCCTTCCATGGTGACGGTCGCCATGGGGACGGCGCGGCTGCTTCCCGGCCGTGCCGACAGTGCCGCAGAGATCGCTCTGGCGCCCCCTGGCGGCCACATGTGGAGCGGTGGGAGCTGCTCCAGTACCTGCTTCTCCGCCACCCCATCGCGGCCTTTTCCTTCCCCCAACAGCGCGAGCGTTTAAAAAACATCGAACGCATCTGCTGCCTCCTGAGGAAGGT
........................................................................................................................(((..((....((((..(((((........(((..(((((..((((.......)))).)))))..))).((..((.....))..))))))).((.(((.((((((....((((((..((((((((....((((....))))))))))))..))))))))).))).))).))..))))))..)))...............................................................................................................................................................................
........................................................................................................................121.......................................................................................................................................................................................307..........................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR040020(GSM532905)
G699N_2. (cervix)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR040034(GSM532919)
G001N. (cervix)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR040018(GSM532903)
G701N. (cervix)
TAX577580(Rovira)
total RNA. (breast)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR189785SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577741(Rovira)
total RNA. (breast)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR038859(GSM458542)
MM386. (cell line)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR040032(GSM532917)
G603N. (cervix)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR033731(GSM497076)
h929 Cell line (h929). (B cell)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR015365(GSM380330)
Memory B cells (MM139). (B cell)
SRR040042(GSM532927)
G428N. (cervix)
SRR343334SRR191574(GSM715684)
78genomic small RNA (size selected RNA from t. (breast)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR189784SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR040041(GSM532926)
G612T. (cervix)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040010(GSM532895)
G529N. (cervix)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)
TAX577746(Rovira)
total RNA. (breast)
SRR040019(GSM532904)
G701T. (cervix)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR040037(GSM532922)
G243T. (cervix)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR189783SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040036(GSM532921)
G243N. (cervix)
SRR189782SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
TAX577739(Rovira)
total RNA. (breast)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR029126(GSM416755)
143B. (cell line)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR343335SRR330918(SRX091756)
tissue: normal skindisease state: normal. (skin)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577744(Rovira)
total RNA. (breast)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)
SRR040035(GSM532920)
G001T. (cervix)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR189787
.......................................................................................................................................................................................................................................................................................................................................................................................CTCCAGTACCTGCTTATC...................................................................................... 189.000.00------9.00-----------------------------------------------------------------------------------
................................................AGACGGACGGACACACCT............................................................................................................................................................................................................................................................................................................................................................................................................................. 1814.004.00---------4.00--------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................CTCTGCGGCACTGTCGGCACGGC....................................................................................................................................................... 2313.003.00----3.00-------------------------------------------------------------------------------------
...............................................AGACGGACGGACACACCTC............................................................................................................................................................................................................................................................................................................................................................................................................................. 1913.003.00---------1.00---2.00----------------------------------------------------------------------------
...................................................CACGACAGATGGAAAGACAGACGGACGGACACA........................................................................................................................................................................................................................................................................................................................................................................................................... 3312.002.00----2.00-------------------------------------------------------------------------------------
....................................GACGGACACACCTCGGCACAGCACA.................................................................................................................................................................................................................................................................................................................................................................................................................................. 2512.002.00-------------------2.00----------------------------------------------------------------------
...............................................GACGGACGGACACACCTC.............................................................................................................................................................................................................................................................................................................................................................................................................................. 1812.002.00----2.00-------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................TCTGCGGCACTGTCGGCACGGC........................................................................................................................................................ 2212.002.00----1.00-------------------------------------------------------------------------1.00-----------
.......................................ACGGACGGACACACCTCGGCACAGC............................................................................................................................................................................................................................................................................................................................................................................................................................... 2511.001.00----------------------------------------------------1.00-------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................CAGTACCTGCTTCTCCGCCA................................................................................. 201.000.00------------------------------1.00-----------------------------------------------------------
.........................................CAGACGGACGGACACACCTCGGCACA............................................................................................................................................................................................................................................................................................................................................................................................................................ 2611.001.00-----------------------------------------------------------1.00------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................GAAGCAGGTACTGGAGCA........................................................................................ 1811.001.00---------------------------------------------------------------1.00--------------------------
..........................................................................................................................................................................................................................................................................................................CTTCCCGGCCGTGCCGG.................................................................................................................................................................... 171.000.00--------------------------------------------------------------------------------1.00---------
......................................................................................................................................................CTGTCTCCGCCCCCAGCAAAGGT.................................................................................................................................................................................................................................................................................................................. 231.000.00---------------------------------------------------------------------1.00--------------------
........................................................................................................................................................................................................................................................................................................................................................CACCGCTCCACATGTGGCCGCCAG............................................................................................................... 2411.001.00---------------------------------------------------1.00--------------------------------------
............................................................................................................................................................................................................................CAGGCTCTGGGCCGTAT.................................................................................................................................................................................................................................................. 171.000.00----------------1.00-------------------------------------------------------------------------
........................................CGGACGGACACACCTCGGCACAG................................................................................................................................................................................................................................................................................................................................................................................................................................ 2311.001.00-----------------------------1.00------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................GCGGCACTGTCGGCACGG........................................................................................................................................................... 1811.001.00-----------------------------1.00------------------------------------------------------------
.....................................................GAAAGACAGACGGACGGACA...................................................................................................................................................................................................................................................................................................................................................................................................................... 2011.001.00-1.00----------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................CCGCCAGGGGGCGCCAGAG................................................................................................................................ 1911.001.00--------------------1.00---------------------------------------------------------------------
........................................................................................GGGGGTGGGAGACGGGGGC.................................................................................................................................................................................................................................................................................................................................................................................... 191.000.00-------------------------------------------------1.00----------------------------------------
........................................................................................GGGGGTGGGAGACGGGGC..................................................................................................................................................................................................................................................................................................................................................................................... 181.000.00--------------------------------------1.00---------------------------------------------------
.............................................................................................................................................................................................................................................................................................................CTGCGGCACTGTCGGCACGGCCGGG......................................................................................................................................................... 2511.001.00----1.00-------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCGCGCTGTTGGGG........................................... 1611.001.00---------------------1.00--------------------------------------------------------------------
.....................................................................................................................................................................................GGCTCAGGGCTGAGTTGA........................................................................................................................................................................................................................................................................................ 181.000.00------------------------------------------1.00-----------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTTAAACGCTCGCGCT................................. 1911.001.00-------------------------------------------------------------------------------1.00----------
...............................................................CGACAGATGGAAAGACAGA............................................................................................................................................................................................................................................................................................................................................................................................................. 1911.001.00------------------------------------------------------1.00-----------------------------------
...............................................................................................................................GACAGAGAGGAAGGGGGCATGGCCGTAG.................................................................................................................................................................................................................................................................................................................................... 2811.001.00---------------------------------------------1.00--------------------------------------------
...................................................TGTGTCCGTCCGTCTGGCC......................................................................................................................................................................................................................................................................................................................................................................................................................... 191.000.00-------------------------------------------------------------------1.00----------------------
.............................................AAGACAGACGGACGGACACACCTCGG........................................................................................................................................................................................................................................................................................................................................................................................................................ 2611.001.00------------------1.00-----------------------------------------------------------------------
.................................................................................................................................................................................ACTCAGCCCTGAGCCCGCG........................................................................................................................................................................................................................................................................................... 1911.001.00--------------------1.00---------------------------------------------------------------------
................................................................................CGTGGGCTGGGGGTGTT.............................................................................................................................................................................................................................................................................................................................................................................................. 171.000.00--------------------------------------------------------------------1.00---------------------
.....................................................................................................................................................................................................................................................................................................................................................................GTGGAGCGGTGGGAGCA......................................................................................................... 171.000.00------------------------------------------------1.00-----------------------------------------
..............................................................................................................................AGAGAGGAAGGGGGCATGGCCGTAGG....................................................................................................................................................................................................................................................................................................................................... 2611.001.00------------------------------------------------------------1.00-----------------------------
...........................................................CGACAGATGGAAAGACAGACGGA............................................................................................................................................................................................................................................................................................................................................................................................................. 2311.001.00------------------------------------------------------------------------1.00-----------------
........................................................................................GGGGGTGGGAGACGGGGGA.................................................................................................................................................................................................................................................................................................................................................................................... 191.000.00-------------------------------1.00----------------------------------------------------------
...............................................................................................................................................................................................................................................................AGGCCCTTCCATGGTGACTGT........................................................................................................................................................................................................... 2111.000.00----------------------------------------------------------------------1.00-------------------
........................................................................................GGGGGTGGGAGACGGGCGG.................................................................................................................................................................................................................................................................................................................................................................................... 191.000.00--------------------------------------------------------------------------------------1.00---
..........................................................................................................................................................................................................................................................................................................CTTCCCGGCCGTGCCGGCCC................................................................................................................................................................. 201.000.00--------------------------1.00---------------------------------------------------------------
...........................................................................................................................................................................................GGGCTGAGTTCCTCTAGC.................................................................................................................................................................................................................................................................................. 181.000.00----------------1.00-------------------------------------------------------------------------
................................................AAGACAGACGGACGGACACACCT........................................................................................................................................................................................................................................................................................................................................................................................................................ 2311.001.00------------------------------1.00-----------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................GTGGCGGAGAAGCAGGTA................................................................................ 1811.001.00--------------------------------------------------1.00---------------------------------------
.......................................................TCCGTCCGTCTGTCTTTCCGAAA................................................................................................................................................................................................................................................................................................................................................................................................................. 231.000.00---------------------------------------------------------------------------------1.00--------
........................................................................................GGGGGTGGGAGACGGGGGCC................................................................................................................................................................................................................................................................................................................................................................................... 201.000.00-------------------------------1.00----------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................CACGGCCGGGAAGCAGCC........................................................................................................................................................................ 1811.001.00----1.00-------------------------------------------------------------------------------------
.................................................................................................................................................GGCGGAGACAGAGAGG.............................................................................................................................................................................................................................................................................................................................. 1650.200.20----------------------------------------------------------------------------------------0.20-
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTTCCTCAGGAGGC 1660.170.17-----------------------------------------------------------------------------------------0.17