ID: uc009yck.1_intron_11_0_chr11_802598_r
GENE: PIDD(1)
chr11:802548-802731-


(2)
AGO2.ip 		(3)
B-CELL 		(2)
BRAIN 		(5)
BREAST 		(11)
CELL-LINE 		(2)
HEART 		(1)
HELA 		(2)
LIVER 		(2)
OTHER 		(4)
SKIN 		(2)
UTERUS

Sense strand
GCAGGGGAACCCCCTGGGTGAGGCCTCGCCAGACGCCCCGAGTTCACCAGGTAGGCTTGGTGCTAGAAGGGGCAGACCTGGGATAGGACATGAGTCTCCTCACTGTCCTGAGCACATGTCTGTCCCCTGCACAGTGGCAGCCCTCATTCCAGAAATGCCCAGACTGTTCCTGACCTCAGATTTG
.............................................................((.((..(((((((((.((...(((((((((((....)))).)))))))....)).)))))))))))))......................................................
.............................................................62......................................................................134................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR189782SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR189786SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR189787GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR191481(GSM715591)
43genomic small RNA (size selected RNA from t. (breast)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		TAX577742(Rovira)
total RNA. (breast)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		TAX577743(Rovira)
total RNA. (breast)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR191566(GSM715676)
94genomic small RNA (size selected RNA from t. (breast)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
..................................................................AAGGGGCAGACCTGGGATAGGA................................................................................................22122.0022.0010.00-----2.00-1.00-1.00------1.00-----1.001.001.00-1.00--1.001.001.00----
...........................................................................ACCTGGGATAGGACATGAGTCTC......................................................................................2315.005.005.00------------------------------------
..................................................................AAGGGGCAGACCTGGGATAGGACA..............................................................................................2414.004.004.00------------------------------------
..................................................................AAGGGGCAGACCTGGGATAGGAA...............................................................................................2314.0022.004.00------------------------------------
.........................................................................................................TCCTGAGCACATGTCTGTCCCCTGC......................................................2514.004.003.00-----------------1.00------------------
...................................................................AGGGGCAGACCTGGGATAGGA................................................................................................2113.003.003.00------------------------------------
.....................................................................................................................................................CAGAAATGCCCAGACTGTTCCTG............2313.003.00--3.00----------------------------------
...............................................................TAGAAGGGGCAGACCTGGGATAGGACATG............................................................................................2913.003.00-3.00-----------------------------------
.........................................................................................................TCCTGAGCACATGTCTGTCCCCTG.......................................................2412.002.00---1.00---------1.00-----------------------
...........................................................................................................CTGAGCACATGTCTGTCCCCTGC......................................................2312.002.00---1.00----------------------1.00----------
.....................................................................................................................................................CAGAAATGCCCAGACTGTTCCT.............2211.001.00-----------------------------1.00-------
.........................................................................................................TCCTGAGCACATGTCTGTCCCCTGCA.....................................................2611.001.00---------------------------------1.00---
.................................................................GAAGGGGCAGACCTGGGATAGGACATG............................................................................................2711.001.00-1.00-----------------------------------
..............................................CCAGGTAGGCTTGGTGCTAGAAGGG.................................................................................................................2511.001.00----1.00--------------------------------
...........................................................................ACCTGGGATAGGACATGAGTCT.......................................................................................2211.001.00---------1.00---------------------------
...........................................................................................................CTGAGCACATGTCTGTCCCCTG.......................................................2211.001.00---1.00---------------------------------
..........................................................................................................CCTGAGCACATGTCTGTCCCC.........................................................2111.001.00-------1.00-----------------------------
......................................................................................................................................................AGAAATGCCCAGACTGTTCCTG............2211.001.00----------------------------1.00--------
..................................................................AAGGGGCAGACCTGGGATAGGC................................................................................................2211.001.00--------------1.00----------------------
..................................................................AAGGGGCAGACCTGGGATAG..................................................................................................2021.001.00----------------------------------0.500.50-
..................................................................AAGGGGCAGACCTGGGATAGG.................................................................................................2111.001.00----------------1.00--------------------
...........................................................................ACCTGGGATAGGACATGAG..........................................................................................1911.001.00--------------------1.00----------------
..........................................................................................................CCTGAGCACATGTCTGTCCCCT........................................................2211.001.00----1.00--------------------------------
...........................................................................ACCTGGGATAGGACATGAGCCTC......................................................................................2311.001.00-----1.00-------------------------------
..................................................................AAGGGGCAGACCTGGGATAGGATAA.............................................................................................2511.0022.00-----------1.00-------------------------
............................................................................................................................................................GCCCAGACTGTTCCTGA...........1711.001.00---------------1.00---------------------
..................................................................AAGGGGCAGACCTGGGATAGGAC...............................................................................................2311.001.00-------------------1.00-----------------
................................................................................................................................................................AGACTGTTCCTGACC.........1550.200.20----0.20--------------------------------
..................................................................................................................CATGTCTGTCCCCTGC......................................................1680.120.12------------------------------------0.12

Antisense strand
GCAGGGGAACCCCCTGGGTGAGGCCTCGCCAGACGCCCCGAGTTCACCAGGTAGGCTTGGTGCTAGAAGGGGCAGACCTGGGATAGGACATGAGTCTCCTCACTGTCCTGAGCACATGTCTGTCCCCTGCACAGTGGCAGCCCTCATTCCAGAAATGCCCAGACTGTTCCTGACCTCAGATTTG
.............................................................((.((..(((((((((.((...(((((((((((....)))).)))))))....)).)))))))))))))......................................................
.............................................................62......................................................................134................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR189782SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR189786SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR189787GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR191481(GSM715591)
43genomic small RNA (size selected RNA from t. (breast)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		TAX577742(Rovira)
total RNA. (breast)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		TAX577743(Rovira)
total RNA. (breast)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR191566(GSM715676)
94genomic small RNA (size selected RNA from t. (breast)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
...........................................................................................................................................................TCTGAGGTCAGGAACAGTCTGGGCA.... 2511.001.00----------------------1.00--------------
.............................................................................................................................................................CCCAGACTGTTCCTGGCA......... 181.000.00-----1.00-------------------------------
...................................................................................................TCACTGTCCTGAGCAAGCC.................................................................. 191.000.00---------------------1.00---------------
..........................CGCCAGACGCCCCGATA............................................................................................................................................. 171.000.00------------1.00------------------------