ID: uc009ybv.1_intron_1_0_chr11_460289_f.3p
GENE: PTDSS2(2)
chr11:473695-473944+


(1)
B-CELL
(1)
BRAIN
(1)
BREAST
(4)
CELL-LINE
(1)
LIVER
(4)
OTHER
(5)
SKIN
(1)
UTERUS

Sense strand
GGCGAATGTCCGGCCCAGGGTGGTGGAGGTAGCTGGGCTTTCCCCGCGGCGGAGTCGCCCAGCTCTGCCCGAGGCCCCTTCCTCCCGCCCCAGCATCAGGGGCTGTTCCACAATGGGTGTCTGGGGGTCCCTGCAGCCTCCCACCTCCCTCCTGGGAGAAGCCTGCACACACTGAGGGGCTGTTTGTTCTTTATTTGCAGAGGTATTGTGGCCAGTATTTTGGTTTTCTTATGTTTTGGAGTCACACAAG
................................................................((((....(((((((....((((((((.......)))))...........))).....)))))))...))))..................................................................................................................
.......................................................56...............................................................................137...............................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189787SRR189786SRR189784SRR189782SRR037937(GSM510475)
293cand2. (cell line)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR037943(GSM510481)
293DcrTN. (cell line)
TAX577590(Rovira)
total RNA. (breast)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
............................................................AGCTCTGCCCGAGGCCCCTCAGT.......................................................................................................................................................................2328.000.0016.008.003.00------1.00--------
............................................................AGCTCTGCCCGAGGCCCCTCAG........................................................................................................................................................................226.000.00--6.00---------------
............................................................AGCTCTGCCCGAGGCCCCTCTGG.......................................................................................................................................................................232.000.00-2.00----------------
...................................................................................................................GGTGTCTGGGGGTCCAAA.....................................................................................................................182.000.00----2.00-------------
............................................................AGCTCTGCCCGAGGCCCCTCAGC.......................................................................................................................................................................232.000.001.001.00----------------
........................GGAGGTAGCTGGGCTAACT...............................................................................................................................................................................................................191.000.00------1.00-----------
............................................................AGCTCTGCCCGAGGCCCCTCACG.......................................................................................................................................................................231.000.001.00-----------------
............................................................AGCTCTGCCCGAGGCCCCTCATT.......................................................................................................................................................................231.000.00--1.00---------------
.......................................................................................................................................................................................................................................TGTTTTGGAGTCACACA..1711.001.00-------1.00----------
............................................................AGCTCTGCCCGAGGCCCCTGAGT.......................................................................................................................................................................231.000.00-1.00----------------
............................................................AGCTCTGCCCGAGGCCCCTC..........................................................................................................................................................................201.000.00---1.00--------------
............................................................AGCTCTGCCCGAGGCCCCACAG........................................................................................................................................................................221.000.00--1.00---------------
............................................................AGCTCTGCCCGAGGCCCCTCAAT.......................................................................................................................................................................231.000.001.00-----------------
............................................................AGCTCTGCCCGAGGCCCCTGATT.......................................................................................................................................................................231.000.00-1.00----------------
..........................................CCCGCGGCGGAGTCGCCA..............................................................................................................................................................................................181.000.00-----------1.00------
............................................................AGCTCTGCCCGAGGCCCCTCTGT.......................................................................................................................................................................231.000.001.00-----------------
.....................................................................................................................................................................................GTTTGTTCTTTATTTGTGT..................................................191.000.00--------------1.00---
.............................................................GCTCTGCCCGAGGCCACTC..........................................................................................................................................................................191.000.00---1.00--------------
............................................................................................................................................................................................CTTTATTTGCAGAGGTTACC..........................................201.000.00------------1.00-----
.......................................................................................................................TCTGGGGGTCCCTGCTTC.................................................................................................................181.000.00---1.00--------------
...................................................................................................................GGTGTCTGGGGGTCCAGC.....................................................................................................................181.000.00----1.00-------------
...................................................................................................................................................................TGCACACACTGAGGGGCTGTTTGTTCTTTG.........................................................301.000.00-------------1.00----
............................................................AGCTCTGCCCGAGGCCCCTCC.........................................................................................................................................................................211.000.00---1.00--------------
............................................................AGCTCTGCCCGAGGCCCCTTGGT.......................................................................................................................................................................231.000.001.00-----------------
.............................TAGCTGGGCTTTCCCC.............................................................................................................................................................................................................1620.500.50----------------0.50-
.....................................................................................................................................CAGCCTCCCACCTCCCT....................................................................................................1770.140.14-----------------0.14

Antisense strand
GGCGAATGTCCGGCCCAGGGTGGTGGAGGTAGCTGGGCTTTCCCCGCGGCGGAGTCGCCCAGCTCTGCCCGAGGCCCCTTCCTCCCGCCCCAGCATCAGGGGCTGTTCCACAATGGGTGTCTGGGGGTCCCTGCAGCCTCCCACCTCCCTCCTGGGAGAAGCCTGCACACACTGAGGGGCTGTTTGTTCTTTATTTGCAGAGGTATTGTGGCCAGTATTTTGGTTTTCTTATGTTTTGGAGTCACACAAG
................................................................((((....(((((((....((((((((.......)))))...........))).....)))))))...))))..................................................................................................................
.......................................................56...............................................................................137...............................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189787SRR189786SRR189784SRR189782SRR037937(GSM510475)
293cand2. (cell line)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR037943(GSM510481)
293DcrTN. (cell line)
TAX577590(Rovira)
total RNA. (breast)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
...................................................................................................................................TGCAGCCTCCCACCTCCTCG................................................................................................... 201.000.00---1.00--------------
.....................................................................................................................................CAGCCTCCCACCTCCTGTG.................................................................................................. 191.000.00----------1.00-------
......................................................TCGCCCAGCTCTGCCTCT.................................................................................................................................................................................. 181.000.00-----1.00------------
...................................................................................CCCGCCCCAGCATCATGG..................................................................................................................................................... 181.000.001.00-----------------
..............................................................................................................................GTCCCTGCAGCCTCCGACT......................................................................................................... 191.000.00---------------1.00--
..............................................................................................................................GTCCCTGCAGCCTCCCAGGCT....................................................................................................... 211.000.00--------1.00---------