| (2) B-CELL | (2) BRAIN | (2) BREAST | (20) CELL-LINE | (2) CERVIX | (3) HEART | (1) HELA | (1) KIDNEY | (1) LIVER | (3) OTHER | (18) SKIN | (1) XRN.ip |
| TTAAGGAGCTCCGAAAAGCAAGAAATCAAATAACACAGTTGGAATCCTTGGTGAGTCTGGAATGATTAAACTAAAATTTGTCTTCGTCTTCCATTTATATACCAAATCAGTTCCGAACTTAGGAGGATACAGCTTAACACACAGCTAGCTGTATCTCAAATCAGTAGGTAGAGCCTCTGCCTCATTTGAAGCAACTGCCCTTTGAGCATCAATTCAGAGGACATGAAAGAGGGACATGATCACATCTGGA ..............................................................(((((............................................(((.......))).(((((((((............)))))))))...)))))..((((((.....)))))).................................................................... ...........................................................60...........................................................................................................................185............................................................... | Size | Perfect hit | Total Norm | Perfect Norm | SRR037944(GSM510482) 293DcrTN_cand5. (cell line) | SRR029128(GSM416757) H520. (cell line) | SRR037940(GSM510478) 293cand5_rep2. (cell line) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR189782 | SRR029130(GSM416759) DLD2. (cell line) | SRR037939(GSM510477) 293cand5_rep1. (cell line) | DRR001488(DRX001042) "Hela short nuclear cell fraction, LNA(+)". (hela) | SRR037937(GSM510475) 293cand2. (cell line) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR343334 | SRR037936(GSM510474) 293cand1. (cell line) | SRR330861(SRX091699) tissue: skin psoriatic involveddisease state:. (skin) | SRR037941(GSM510479) 293DroshaTN. (cell line) | SRR029132(GSM416761) MB-MDA231. (cell line) | SRR207116(GSM721078) Nuclear RNA. (cell line) | SRR342898(SRX096794) small RNA seq of Right atrial tissue. (heart) | SRR330895(SRX091733) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330872(SRX091710) tissue: skin psoriatic involveddisease state:. (skin) | SRR033719(GSM497064) 6hr Activated B cell line (ABC158). (B cell) | SRR037942(GSM510480) 293DroshaTN_cand5. (cell line) | SRR330880(SRX091718) tissue: skin psoriatic involveddisease state:. (skin) | SRR189784 | SRR207110(GSM721072) Nuclear RNA. (cell line) | SRR444042(SRX128890) Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin) | SRR039625(GSM531988) HBV(-) HCV(-) HCC Tissue Sample. (liver) | SRR342894(SRX096790) small RNA seq of Right atrial tissue. (heart) | SRR553575(SRX182781) source: Kidney. (Kidney) | SRR029129(GSM416758) SW480. (cell line) | DRR000556(DRX000314) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | SRR330922(SRX091760) tissue: normal skindisease state: normal. (skin) | SRR330910(SRX091748) tissue: normal skindisease state: normal. (skin) | SRR037943(GSM510481) 293DcrTN. (cell line) | SRR330864(SRX091702) tissue: skin psoriatic involveddisease state:. (skin) | SRR040022(GSM532907) G575N. (cervix) | SRR038861(GSM458544) MM466. (cell line) | SRR191597(GSM715707) 75genomic small RNA (size selected RNA from t. (breast) | SRR037938(GSM510476) 293Red. (cell line) | GSM450610(GSM450610) miRNA sequencing raw reads from post-mortem s. (brain) | SRR330919(SRX091757) tissue: normal skindisease state: normal. (skin) | SRR330901(SRX091739) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR033720(GSM497065) EBV activated B cell line (EBV159). (B cell) | SRR039635(GSM518472) THP1_nuc_sRNAs. (cell line) | SRR330868(SRX091706) tissue: skin psoriatic involveddisease state:. (skin) | SRR342900(SRX096796) small RNA seq of Right atrial tissue. (heart) | SRR330858(SRX091696) tissue: skin psoriatic involveddisease state:. (skin) | SRR330902(SRX091740) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330915(SRX091753) tissue: normal skindisease state: normal. (skin) | GSM532879(GSM532879) G659N. (cervix) | SRR330869(SRX091707) tissue: skin psoriatic involveddisease state:. (skin) | SRR330878(SRX091716) tissue: skin psoriatic involveddisease state:. (skin) | SRR330916(SRX091754) tissue: normal skindisease state: normal. (skin) | GSM450598(GSM450598) miRNA sequencing raw reads from post-mortem s. (brain) | SRR330859(SRX091697) tissue: skin psoriatic involveddisease state:. (skin) | TAX577743(Rovira) total RNA. (breast) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................................................................................................................................AGTAGGTAGAGCCTCAGTC..................................................................... | 19 | 49.00 | 0.00 | 7.00 | 5.00 | 5.00 | - | - | 1.00 | 4.00 | - | 3.00 | - | - | 2.00 | - | 2.00 | 2.00 | - | 1.00 | 1.00 | 1.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | 1.00 | - | 1.00 | 1.00 | 1.00 | 1.00 | - | 1.00 | - | 1.00 | 1.00 | - | - | 1.00 | - | - | - | 1.00 | - | - | 1.00 | 1.00 | - | - | - | |
| ..................................................................................................................................................................AGTAGGTAGAGCCTCAGT...................................................................... | 18 | 12.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | 1.00 | 1.00 | - | 1.00 | 1.00 | - | - | - | 1.00 | - | |
| ...........................AAATAACACAGTTGGAATCCTTGAAA..................................................................................................................................................................................................... | 26 | 3.00 | 0.00 | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................CAAATAACACAGTTGGAATCCTTG........................................................................................................................................................................................................ | 24 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................CAGTTGGAATCCTTGGAGA.................................................................................................................................................................................................... | 19 | 2.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................ATAACACAGTTGGAATCCT.......................................................................................................................................................................................................... | 19 | 1 | 2.00 | 2.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................ATTAAACTAAAATTTGTCT....................................................................................................................................................................... | 19 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................TCAAATCAGTAGGTAGA.............................................................................. | 17 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................CAGTAGGTAGAGCCTCTGAA..................................................................... | 20 | 2.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................TCAGTAGGTAGAGCCACG........................................................................ | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................AAATAACACAGTTGGAATCCTTGAGA..................................................................................................................................................................................................... | 26 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................TCCTTGGTGAGTCTGTGG............................................................................................................................................................................................ | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | |
| .................................................................................................................................................................CAGTAGGTAGAGCCTCA........................................................................ | 17 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................................................GAGCATCAATTCAGAGGGTG........................... | 20 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................CACAGTTGGAATCCTTGGTG..................................................................................................................................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................CAGTAGGTAGAGCCTGG........................................................................ | 17 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | |
| .........................................................................................................................................................................................................................AGGACATGAAAGAGGAAAG.............. | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................AATCAAATAACACAGTTGGAATCCTTG........................................................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................CAGTAGGTAGAGCCTCACAC..................................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................CATTTATATACCAAATCAG............................................................................................................................................ | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................AAATCAAATAACACAGTTGGAATCCT.......................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................ACACAGTTGGAATCCTTG........................................................................................................................................................................................................ | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................TGAAAGAGGGACATGGTT......... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................TCCATTTATATACCACTA............................................................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................AGTTGGAATCCTTGGTGAGTCTGGA............................................................................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................CAGTAGGTAGAGCCTCAG....................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................AATCAAATAACACAGTTGGAATCCTAG........................................................................................................................................................................................................ | 27 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................................AGTAGGTAGAGCCTCCGTC..................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................................................CAGTAGGTAGAGCCTCAGAC..................................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| TTAAGGAGCTCCGAAAAGCAAGAAATCAAATAACACAGTTGGAATCCTTGGTGAGTCTGGAATGATTAAACTAAAATTTGTCTTCGTCTTCCATTTATATACCAAATCAGTTCCGAACTTAGGAGGATACAGCTTAACACACAGCTAGCTGTATCTCAAATCAGTAGGTAGAGCCTCTGCCTCATTTGAAGCAACTGCCCTTTGAGCATCAATTCAGAGGACATGAAAGAGGGACATGATCACATCTGGA ..............................................................(((((............................................(((.......))).(((((((((............)))))))))...)))))..((((((.....)))))).................................................................... ...........................................................60...........................................................................................................................185............................................................... | Size | Perfect hit | Total Norm | Perfect Norm | SRR037944(GSM510482) 293DcrTN_cand5. (cell line) | SRR029128(GSM416757) H520. (cell line) | SRR037940(GSM510478) 293cand5_rep2. (cell line) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR189782 | SRR029130(GSM416759) DLD2. (cell line) | SRR037939(GSM510477) 293cand5_rep1. (cell line) | DRR001488(DRX001042) "Hela short nuclear cell fraction, LNA(+)". (hela) | SRR037937(GSM510475) 293cand2. (cell line) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR343334 | SRR037936(GSM510474) 293cand1. (cell line) | SRR330861(SRX091699) tissue: skin psoriatic involveddisease state:. (skin) | SRR037941(GSM510479) 293DroshaTN. (cell line) | SRR029132(GSM416761) MB-MDA231. (cell line) | SRR207116(GSM721078) Nuclear RNA. (cell line) | SRR342898(SRX096794) small RNA seq of Right atrial tissue. (heart) | SRR330895(SRX091733) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330872(SRX091710) tissue: skin psoriatic involveddisease state:. (skin) | SRR033719(GSM497064) 6hr Activated B cell line (ABC158). (B cell) | SRR037942(GSM510480) 293DroshaTN_cand5. (cell line) | SRR330880(SRX091718) tissue: skin psoriatic involveddisease state:. (skin) | SRR189784 | SRR207110(GSM721072) Nuclear RNA. (cell line) | SRR444042(SRX128890) Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin) | SRR039625(GSM531988) HBV(-) HCV(-) HCC Tissue Sample. (liver) | SRR342894(SRX096790) small RNA seq of Right atrial tissue. (heart) | SRR553575(SRX182781) source: Kidney. (Kidney) | SRR029129(GSM416758) SW480. (cell line) | DRR000556(DRX000314) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | SRR330922(SRX091760) tissue: normal skindisease state: normal. (skin) | SRR330910(SRX091748) tissue: normal skindisease state: normal. (skin) | SRR037943(GSM510481) 293DcrTN. (cell line) | SRR330864(SRX091702) tissue: skin psoriatic involveddisease state:. (skin) | SRR040022(GSM532907) G575N. (cervix) | SRR038861(GSM458544) MM466. (cell line) | SRR191597(GSM715707) 75genomic small RNA (size selected RNA from t. (breast) | SRR037938(GSM510476) 293Red. (cell line) | GSM450610(GSM450610) miRNA sequencing raw reads from post-mortem s. (brain) | SRR330919(SRX091757) tissue: normal skindisease state: normal. (skin) | SRR330901(SRX091739) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR033720(GSM497065) EBV activated B cell line (EBV159). (B cell) | SRR039635(GSM518472) THP1_nuc_sRNAs. (cell line) | SRR330868(SRX091706) tissue: skin psoriatic involveddisease state:. (skin) | SRR342900(SRX096796) small RNA seq of Right atrial tissue. (heart) | SRR330858(SRX091696) tissue: skin psoriatic involveddisease state:. (skin) | SRR330902(SRX091740) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330915(SRX091753) tissue: normal skindisease state: normal. (skin) | GSM532879(GSM532879) G659N. (cervix) | SRR330869(SRX091707) tissue: skin psoriatic involveddisease state:. (skin) | SRR330878(SRX091716) tissue: skin psoriatic involveddisease state:. (skin) | SRR330916(SRX091754) tissue: normal skindisease state: normal. (skin) | GSM450598(GSM450598) miRNA sequencing raw reads from post-mortem s. (brain) | SRR330859(SRX091697) tissue: skin psoriatic involveddisease state:. (skin) | TAX577743(Rovira) total RNA. (breast) |
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