ID: uc009xmd.1_intron_1_0_chr10_38679835_r.3p
GENE: (2)
chr10:38679785-38680034-


(1)
AGO2.ip
(1)
AGO3.ip
(2)
B-CELL
(5)
BRAIN
(1)
BREAST
(10)
CELL-LINE
(1)
HEART
(3)
HELA
(1)
LIVER
(3)
OTHER
(3)
SKIN

Sense strand
TCTCTTTTTTTTGTTTGTTTTTATAGATGGGTCAATGCCCATTATCACTCTAGATGGATAAGGGAGCCTTAATTATATACTTATATTTTTGCACTGTCATATTGGAGTGGGGTAAAAATGTTTCTTCTTTTACGTCTAATACTCTTGTTTTTTTTTTTTTTTTTTTTTTTGCTGTGCCCTAAACCATTACATAACTGAAGACTCCCACCTTCAGGCAGGATTGGGTAGTACATGTTTGTAACTACCTGGC
.......................................................................................................(((((((.((((((..........)))))).))....))))).........................................................................................................
............................................................................................93.......................................................................166..................................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189782SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR390725(GSM850204)
small rna immunoprecipitated. (cell line)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR343334DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189783GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
................................................................................................................................................TTGTTTTTTTTTTTTTTTTTTTTTTTGGGG............................................................................308.000.006.00-2.00--------------------------
................................................................................................................................................TTGTTTTTTTTTTTTTTTTTTTTTTTCTTT............................................................................307.000.002.004.00-1.00-------------------------
...CTTTTTTTTGTTTGTTGCG....................................................................................................................................................................................................................................196.000.00----6.00------------------------
...CTTTTTTTTGTTTGTTCCG....................................................................................................................................................................................................................................195.000.00----5.00------------------------
.................................................................................................................................................TGTTTTTTTTTTTTTTTTTTTTTTTGTTGC...........................................................................304.000.002.00-2.00--------------------------
..............................................................................................................................................TCTTGTTTTTTTTTTTTTTTTTTTTTTTCCC.............................................................................314.000.003.001.00---------------------------
..........................................................................................................................................ATACTCTTGTTTTTTTTTTTTTTTTTTTTG..................................................................................303.000.00---2.00-1.00-----------------------
................................................................................................................................................TTGTTTTTTTTTTTTTTTTTTTTTTTCTAG............................................................................303.000.00-2.00------1.00--------------------
.................................................................................................CATATTGGAGTGGGGTAA.......................................................................................................................................1813.003.00----------3.00------------------
..............................................................................................................................................TCTTGTTTTTTTTTTTTTTTTTTTAAC.................................................................................272.000.001.00-1.00--------------------------
..........................................................................................................................................ATACTCTTGTTTTTTTTTTTTTTTTTT.....................................................................................2712.002.00-1.00---1.00-----------------------
........................................................................................................GAGTGGGGTAAAAATGTTTCCTC...........................................................................................................................232.000.00-2.00---------------------------
................................................................................................................................................TTGTTTTTTTTTTTTTTTTTTTTTTTGGGGG...........................................................................312.000.002.00----------------------------
................................................................................................................................................TTGTTTTTTTTTTTTTTTTTTTTTTTCGC.............................................................................292.000.001.00-1.00--------------------------
..........................................................................................................................................ATACTCTTGTTTTTTTTTTTTTTTTTTTTTTTT...............................................................................3312.001.00---1.00-1.00-----------------------
............................................................................................................................................ACTCTTGTTTTTTTTTTTTTTTTTTTTTG.................................................................................292.000.00-1.00-1.00-------------------------
..........................................................................................................................................ATACTCTTGTTTTTTTTTTTTTTTTTTTTTTTG...............................................................................3312.002.00---2.00-------------------------
.................................................................................................................................................TGTTTTTTTTTTTTTTTTTTTTTTTGTTTC...........................................................................302.000.002.00----------------------------
.................................................................................................................................................TGTTTTTTTTTTTTTTTTTTTTTTTGTTCG...........................................................................302.000.002.00----------------------------
..........................................................................................................................................ATACTCTTGTTTTTTTTTTTTTTTTTTTTTT.................................................................................3112.002.00---2.00-------------------------
................................................................................................................................................TTGTTTTTTTTTTTTTTTTTTTTTTTGGGTT...........................................................................312.000.00-1.001.00--------------------------
..............................................................................................................................................TCTTGTTTTTTTTTTTTTTTTTTTTTTTCC..............................................................................302.000.002.00----------------------------
..........................................................................................................................................ATACTCTTGTTTTTTTTTTTTTTTTTTTTTTG................................................................................3212.002.00---2.00-------------------------
................................................................................................................................................TTGTTTTTTTTTTTTTTTTTTTTTTTGCTTGG..........................................................................322.000.002.00----------------------------
..........................................................................................................................................ATACTCTTGTTTTTTTTTTTGCTG........................................................................................242.000.002.00----------------------------
..............................................................................................................................................TCTTGTTTTTTTTTTTTTTTTTTTTTCGC...............................................................................291.000.001.00----------------------------
..............................................................................................................................................TCTTGTTTTTTTTTTTTTTGTAG.....................................................................................231.000.00--1.00--------------------------
............................................................................................................................................ACTCTTGTTTTTTTTTTTTTTAAG......................................................................................241.000.00---1.00-------------------------
.........................................................ATAAGGGAGCCTTAATTATACAT..........................................................................................................................................................................231.000.00-1.00---------------------------
............................................................................................................................................ACTCTTGTTTTTTTTTTTGGC.........................................................................................211.000.00----1.00------------------------
......................................................................................TTTTGCACTGTCATATTTTTG...............................................................................................................................................211.000.00------1.00----------------------
..........................................................................................................................................ATACTCTTGTTTTTTTTTTTTTG.........................................................................................231.000.00-------1.00---------------------
................................................................................................................................................TTGTTTTTTTTTTTTTTTTTTTTTTTAGGA............................................................................301.000.001.00----------------------------
...CTTTTTTTTGTTTGTTACG....................................................................................................................................................................................................................................191.000.00----1.00------------------------
...CTTTTTTTTGTTTGTTCCGT...................................................................................................................................................................................................................................201.000.00----1.00------------------------
..........................................................................ATATACTTATATTTTAACG.............................................................................................................................................................191.000.00---1.00-------------------------
..............................................................................................................................................TCTTGTTTTTTTTTTTTTTTTTTAAAG.................................................................................271.000.00-----1.00-----------------------
..........................................................................................................................................ATACTCTTGTTTTTTTTTTTTTTCTTT.....................................................................................271.000.00-1.00---------------------------
..............................................................................................................................................TCTTGTTTTTTTTTTTTTTTTTATG...................................................................................251.000.00--------1.00--------------------
...............................................................................................................................................CTTGTTTTTTTTTTTTTTTTTTTTTTCGG..............................................................................291.000.001.00----------------------------
......................................................................................TTTTGCACTGTCATATGGG.................................................................................................................................................191.000.00------1.00----------------------
.................................................................................................................................................TGTTTTTTTTTTTTTTTTTTTTTTTGTTCT...........................................................................301.000.00--1.00--------------------------
............................................................................................................................................ACTCTTGTTTTTTTTTTTTTTTCT......................................................................................241.000.00--1.00--------------------------
..............................................................................................................................................TCTTGTTTTTTTTTTTTGCTG.......................................................................................211.000.001.00----------------------------
................................................................................................................................................TTGTTTTTTTTTTTTTTTTTTTTTTTGCTGGGG.........................................................................331.000.001.00----------------------------
..............................................................................................................................................TCTTGTTTTTTTTTTTTTTTTTTTTTTTGACGC...........................................................................331.000.001.00----------------------------
......................................................................................................................................................TTTTTTTTTTTTTTTTTTTTGCTGTCCCC.......................................................................291.000.001.00----------------------------
................................................................................................................................................TTGTTTTTTTTTTTTTTTTTTTTTTTCTGC............................................................................301.000.001.00----------------------------
................................................................................................................................................TTGTTTTTTTTTTTTTTTTTTTTTTTCAGT............................................................................301.000.00--1.00--------------------------
...CTTTTTTTTGTTTGTTGGG....................................................................................................................................................................................................................................191.000.00----1.00------------------------
............................................................................................................................................ACTCTTGTTTTTTTTTTTTTTTTTTTTTGG................................................................................301.000.001.00----------------------------
................................................................................................................................................TTGTTTTTTTTTTTTTTTTTTTTTTTCGAG............................................................................301.000.001.00----------------------------
.................................................................................................................................................TGTTTTTTTTTTTTTTTTTTTTTTTGTGTT...........................................................................301.000.001.00----------------------------
..............................................................................................................................................TCTTGTTTTTTTTTTTTTTTTTTTTTCCTC..............................................................................301.000.001.00----------------------------
..............................................................................................................................................TCTTGTTTTTTTTTTTTTTTTTTTTTTTGGC.............................................................................311.000.001.00----------------------------
.................................................................................................................................................................................................................TTCAGGCAGGATTGGGTAGTACGGG................251.000.00--1.00--------------------------
..................................................................................................................................................................................................................TCAGGCAGGATTGGGTAGCACG..................221.000.00--1.00--------------------------
............................................................................................................................................ACTCTTGTTTTTTTTTTATT..........................................................................................201.000.00-1.00---------------------------
.................................................................................................................................................TGTTTTTTTTTTTTTTTTTTTTTTTGCTTGGC.........................................................................321.000.001.00----------------------------
............................................................................................................................................ACTCTTGTTTTTTTTTAG............................................................................................181.000.00--------1.00--------------------
...CTTTTTTTTGTTTGTTCAC....................................................................................................................................................................................................................................191.000.00----1.00------------------------
..........................................................................................................................................ATACTCTTGTTTTTTTTTCGA...........................................................................................211.000.00--------------1.00--------------
..............................................................................................................................................TCTTGTTTTTTTTTTTTTTTTGTGT...................................................................................251.000.001.00----------------------------
..............................................................................................................................................TCTTGTTTTTTTTTTTTTTTTTTTTTCCCC..............................................................................301.000.001.00----------------------------
..............................................................................................................................................................TTTTTTTTTTTTGCTGTGCCCTAGAC..................................................................261.000.00--1.00--------------------------
...CTTTTTTTTGTTTGTTAGGA...................................................................................................................................................................................................................................201.000.00------------1.00----------------
................................................................................................................................................TTGTTTTTTTTTTTTTTTTTTTTTTTATAG............................................................................301.000.00-1.00---------------------------
......TTTTTTGTTTGTTTTTATCCTC..............................................................................................................................................................................................................................221.000.001.00----------------------------
.................................................................................................................................................TGTTTTTTTTTTTTTTTTTTTTTTTGCGTG...........................................................................301.000.001.00----------------------------
................................................................................................................................................TTGTTTTTTTTTTTTTTTTTTTTTTTGGGTC...........................................................................311.000.001.00----------------------------
..........................................................................................................................................ATACTCTTGTTTTTTTTTTTG...........................................................................................211.000.00-------1.00---------------------
..........................................................................................................................................ATACTCTTGTTTTTTTTTTTTTTTG.......................................................................................251.000.00-----1.00-----------------------
................................................................................................................................................TTGTTTTTTTTTTTTTTTTTTTTTTTATC.............................................................................291.000.001.00----------------------------
................................................................................................................................................TTGTTTTTTTTTTTTTTTTTTTTTTTGGTCG...........................................................................311.000.00--1.00--------------------------
..............................................................................................................................................TCTTGTTTTTTTTTTTTTTTTTTTTTAG................................................................................281.000.00-----1.00-----------------------
......................................................................................................................................................TTTTTTTTTTTTTTTTTTTTGCTGTCCTT.......................................................................291.000.001.00----------------------------
..............................................................................................................................................TCTTGTTTTTTTTTTTTTTTTTTTTCTTG...............................................................................291.000.001.00----------------------------
....................................................................................................................................................................................................................AGGCAGGATTGGGTAGTTC...................191.000.00----------------1.00------------
......................................................................................................................................................................................................AGACTCCCACCTTCAGGCAGGATCGGG.........................271.000.00--1.00--------------------------
...............................................................................................................................................CTTGTTTTTTTTTTTTTTTTTTTCCGC................................................................................271.000.00--1.00--------------------------
..............................................................................................................................................TCTTGTTTTTTTTTTTTTTGGG......................................................................................221.000.001.00----------------------------
..............................................................................................................................................TCTTGTTTTTTTTTTTTTTTTTTATTG.................................................................................271.000.00-1.00---------------------------
..............................................................................................................................................TCTTGTTTTTTTTTTTTTTTTTTAGCT.................................................................................271.000.00-1.00---------------------------
..............................................................................................................................................TCTTGTTTTTTTTTTTTTTTTTTTTACTG...............................................................................291.000.00-1.00---------------------------
..............................................................................................................................................TCTTGTTTTTTTTTTTTTTGCG......................................................................................221.000.001.00----------------------------
.............................................................................................................................................CTCTTGTTTTTTTTTTTTTTTTTTTTTAG................................................................................291.000.00-----1.00-----------------------
...............................................................................................................................................CTTGTTTTTTTTTTTTTTTTTTTACTC................................................................................271.000.00--1.00--------------------------
...............................................................................................................................................CTTGTTTTTTTTTTTTTTTTTTTTTTAGC..............................................................................291.000.001.00----------------------------
..............................................................................................................................................TCTTGTTTTTTTTTTTTTTTTTTTCAGG................................................................................281.000.001.00----------------------------
..........................................................................................................................................ATACTCTTGTTTTTTTTTTTTTTTTTTTTTTT................................................................................3211.001.00---1.00-------------------------
..............................................................................................................................................TCTTGTTTTTTTTTTTTTTTTTTTTTTCCG..............................................................................301.000.00---1.00-------------------------
..............................................................................................................................................TCTTGTTTTTTTTTTTTTTTTTTTTTCAAT..............................................................................301.000.00-1.00---------------------------
................................................................................................................................................TTGTTTTTTTTTTTTTTTTTTTTTTTCCCG............................................................................301.000.00-------1.00---------------------
............................................................................................................................................ACTCTTGTTTTTTTTTTTTTTTAAAG....................................................................................261.000.00-1.00---------------------------
..........................................................................................................................................ATACTCTTGTTTTTTTTTTTTTTTTTTT....................................................................................2811.001.00---1.00-------------------------
...............................................................................................................................................CTTGTTTTTTTTTTTTTTTTTTTTTTTAGG.............................................................................301.000.00--------1.00--------------------
..............................................................................................................................................TCTTGTTTTTTTTTTTTTGCG.......................................................................................211.000.00--1.00--------------------------
..........................................................................................................................................ATACTCTTGTTTTTTTTTTTTTTTTTTTG...................................................................................2911.001.00-----1.00-----------------------
..............................................................................................................................................TCTTGTTTTTTTTTTTTTTTTTTTTTTTAT..............................................................................301.000.00--1.00--------------------------
..............................................................................................................................................TCTTGTTTTTTTTTTTTTGGTA......................................................................................221.000.00--1.00--------------------------
................................................................................................................................................TTGTTTTTTTTTTTTTTTTTTTTTTTATTT............................................................................301.000.00-1.00---------------------------
..............................................................................................................................................TCTTGTTTTTTTTTTTTTTTTTTTTTTCCCC.............................................................................311.000.00--1.00--------------------------
............................................................................................................................................ACTCTTGTTTTTTTTTTTTTTTTTTTTTGGC...............................................................................311.000.00-1.00---------------------------
..............................................................................................................................................TCTTGTTTTTTTTTTTTTTTTTTTAGGG................................................................................281.000.001.00----------------------------
......................................................................................TTTTGCACTGTCATATTGTT................................................................................................................................................201.000.00------1.00----------------------
...CTTTTTTTTGTTTGTTACA....................................................................................................................................................................................................................................191.000.00----1.00------------------------
..............................................................................................................................................TCTTGTTTTTTTTTTTTTTTTTTTTTTCG...............................................................................291.000.001.00----------------------------
..............................................................................................................................................TCTTGTTTTTTTTTTTTGGC........................................................................................201.000.00--1.00--------------------------
............................................................................................................................................ACTCTTGTTTTTTTTTTTTTTTTTTTTTAG................................................................................301.000.00-1.00---------------------------
................................................................................................................................................TTGTTTTTTTTTTTTTTTTTTTTTTTCTAC............................................................................301.000.001.00----------------------------
............................................................................................................................................ACTCTTGTTTTTTTTTTTTTTTTTTTTGGG................................................................................301.000.001.00----------------------------
..............................................................................................................................................TCTTGTTTTTTTTTTTTTTTTTTTTTTTGCCTG...........................................................................331.000.00-------1.00---------------------
............................................................................................................................................ACTCTTGTTTTTTTTTTTTTTGCAT.....................................................................................251.000.00--1.00--------------------------
..................................................................................................................................................GTTTTTTTTTTTTTTTTTTTTTTTGCGTTT..........................................................................301.000.001.00----------------------------
..............................................................................................................................................TCTTGTTTTTTTTTTTTTTTTTTTTTTTCAT.............................................................................311.000.00-1.00---------------------------
..............................................................................................................................................TCTTGTTTTTTTTTTTTTTTTTTAAAC.................................................................................271.000.001.00----------------------------
..............................................................................................................................................TCTTGTTTTTTTTTTTTTTGGCG.....................................................................................231.000.00--1.00--------------------------
...............................................................................................................................................CTTGTTTTTTTTTTTTTTTTTTTTTTTGTTCT...........................................................................321.000.00-1.00---------------------------
..TCTTTTTTTTGTTTGGC.......................................................................................................................................................................................................................................171.000.001.00----------------------------
..................................................................................................................................................GTTTTTTTTTTTTTTTTTTTTTTTGCTGAGGC........................................................................321.000.001.00----------------------------
............................................................................................................................................ACTCTTGTTTTTTTTTTTTTTAGAT.....................................................................................251.000.001.00----------------------------
..............................................................................................................................................TCTTGTTTTTTTTTTTTTTTTTTTCGAG................................................................................281.000.001.00----------------------------
................................................................................................................................................TTGTTTTTTTTTTTTTTTTTTTTTTTCCTT............................................................................301.000.00-1.00---------------------------
...............................................................................................................................................CTTGTTTTTTTTTTTTTTTTCTTG...................................................................................241.000.001.00----------------------------
.................................................................................................................................................TGTTTTTTTTTTTTTTTTTTTTTTTGTCGG...........................................................................301.000.001.00----------------------------
................................................................................................................................................TTGTTTTTTTTTTTTTTTTTTTTTTTCGTC............................................................................301.000.001.00----------------------------
................................................................................................................................................TTGTTTTTTTTTTTTTTTTTTTTTTTCCGC............................................................................301.000.001.00----------------------------
..............................................................................................................................................TCTTGTTTTTTTTTTTTTTTTTTTCG..................................................................................261.000.001.00----------------------------
..............................................................................................................................................TCTTGTTTTTTTTTTTTTTTTTTTTCGAG...............................................................................291.000.001.00----------------------------
......................................................................................TTTTGCACTGTCATATTTATA...............................................................................................................................................211.000.00------1.00----------------------
............................................................................................................................................ACTCTTGTTTTTTTTTTTTTTTTTTTTTTTG...............................................................................3111.001.001.00----------------------------
..................................................................................................................................................GTTTTTTTTTTTTTTTTTTTTTTTGCTTGGC.........................................................................311.000.001.00----------------------------
.................................................................................................................................................TGTTTTTTTTTTTTTTTTTTTTTTTGCTTGG..........................................................................311.000.00--1.00--------------------------
................................................................................................................................................TTGTTTTTTTTTTTTTTTTTTTTTTTGTTC............................................................................301.000.001.00----------------------------
...............................................................................................................................................CTTGTTTTTTTTTTTTTTTTTTTTTTTCCC.............................................................................301.000.00---1.00-------------------------
...............................................................................................................................................CTTGTTTTTTTTTTTTTTTTTTTTTTTAAAG............................................................................311.000.00-1.00---------------------------
...........................................................................................................................................TACTCTTGTTTTTTTTTTTTTTTTTTAT...................................................................................281.000.00-1.00---------------------------
..............................................................................................................................................TCTTGTTTTTTTTTTTTTTTTTTTTTTCCC..............................................................................301.000.001.00----------------------------
..............................................................................................................................................TCTTGTTTTTTTTTTTTTTTTTTTTATTG...............................................................................291.000.00-1.00---------------------------
............................................................................................................................................ACTCTTGTTTTTTTTTTTTTTATGT.....................................................................................251.000.00--1.00--------------------------
..........................................................................................................................................ATACTCTTGTTTTTTTTTTTTTTTTTG.....................................................................................271.000.00---1.00-------------------------
................................................................................................................................................TTGTTTTTTTTTTTTTTTTTTTTTTTCTA.............................................................................291.000.00--1.00--------------------------
..............................................................................................................................................TCTTGTTTTTTTTTTTTTTTTTTTTTATTT..............................................................................301.000.00---1.00-------------------------
............................................................................................................................................ACTCTTGTTTTTTTTTTTTTTC........................................................................................221.000.001.00----------------------------
..........................................................................................................................................ATACTCTTGTTTTTTTTTTTTTTTTTTTACC.................................................................................3111.001.00---1.00-------------------------
..................................................................................................................................................GTTTTTTTTTTTTTTTTTTTTTTTGCGCG...........................................................................291.000.001.00----------------------------
.................................................................................................................................................TGTTTTTTTTTTTTTTTTTTTTTTTGTTC............................................................................291.000.00--1.00--------------------------
..............................................................................................................................................TCTTGTTTTTTTTTTTTTTTTTTTTTAGG...............................................................................291.000.00-1.00---------------------------
................................................................................................................................................TTGTTTTTTTTTTTTTTTTTTTTTTTCGCT............................................................................301.000.001.00----------------------------
................................................................................................................................................TTGTTTTTTTTTTTTTTTTTTTTTTTGCCTTG..........................................................................321.000.001.00----------------------------
..............................................................................................................................................TCTTGTTTTTTTTTTTTTTTTTTTTTTTCCAT............................................................................321.000.00-1.00---------------------------
..............................................................................................................................................TCTTGTTTTTTTTTTTTTTTTCGCG...................................................................................251.000.001.00----------------------------
..............................................................................................................................................TCTTGTTTTTTTTTTTTTTTTCCCC...................................................................................251.000.001.00----------------------------
...............................................................................................................................................CTTGTTTTTTTTTTTTTTTTTTTTTTTCTC.............................................................................301.000.00--1.00--------------------------
...........................................................................................................................................TACTCTTGTTTTTTTTTTTTTTTGGGG....................................................................................271.000.001.00----------------------------
.........................................................ATAAGGGAGCCTTAA..................................................................................................................................................................................1570.710.71-0.71---------------------------
.................................................................................................................................................TGTTTTTTTTTTTTTTTTTTTTTTTGCTG............................................................................2930.670.670.33-0.33--------------------------
.....................................................................................................................................................................................................................GGCAGGATTGGGTAGTACATGT...............2220.500.50-------------0.50---------------
.................................................................................................................................................TGTTTTTTTTTTTTTTTTTTTTTTTGCTGTTG.........................................................................3220.500.50--0.50--------------------------
.................................................................................................................................................TGTTTTTTTTTTTTTTTTTTTTTTTGCTGT...........................................................................3020.500.50--0.50--------------------------
..............................................................................................................................................TCTTGTTTTTTTTTTTTTTTTTTTTTTTGCT.............................................................................3120.500.500.50----------------------------
..........................................................................................................................................................TTTTTTTTTTTTTTTTGCTGTGCCCT......................................................................2620.500.500.50----------------------------
...................................................................................................................................................................................................................CAGGCAGGATTGGGTAGTACATGTTT.............2620.500.50------------------0.50----------
.....................................................................................................................................................................................................................GGCAGGATTGGGTAGTAC...................1840.500.50-------------0.50---------------
....................................................................................................ATTGGAGTGGGGTAAAAATGTTTCTTC...........................................................................................................................2750.400.40-0.40---------------------------
..........................................................................................................................................ATACTCTTGTTTTTTTTTTTTG..........................................................................................2250.400.20---0.20-0.20-----------------------
..........................................................................................................................................ATACTCTTGTTTTTTTTTTTTTTTT.......................................................................................2530.330.33-----0.33-----------------------
.................................................................................................................................................................................................................TTCAGGCAGGATTGGGTAGTA....................2130.330.33-------------------0.33---------
.................................................................................................................................................TGTTTTTTTTTTTTTTTTTTTTTTTGCTGGGGC........................................................................3330.330.67--0.33--------------------------
............................................................................................................................................................TTTTTTTTTTTTTTGCTGTGCCC.......................................................................2330.330.330.33----------------------------
........................................................................................................................................................................................................................................TGTTTGTAACTACCTGGC1830.330.33--------------------0.33--------
.............................................................................................................................................................TTTTTTTTTTTTTGCTGTGCCC.......................................................................2230.330.33--0.33--------------------------
...................................................................................................................................................................................................................CAGGCAGGATTGGGTAG......................1740.250.25---------------------0.25-------
...............................................................................................................................................................TTTTTTTTTTTGCTGTGCCC.......................................................................2040.250.250.25----------------------------
......................................................................................................................................................................................................................GCAGGATTGGGTAGTAC...................1740.250.25----------------------0.25------
...................................................AGATGGATAAGGGAGCCTAACT.................................................................................................................................................................................2250.200.200.20----------------------------
.....................................................ATGGATAAGGGAGCCTTAA..................................................................................................................................................................................1950.200.20-0.20---------------------------
.....................................................ATGGATAAGGGAGCCTTAATTATATAC..........................................................................................................................................................................2750.200.20-0.20---------------------------
..........................................................................................................................................ATACTCTTGTTTTTTTTTTTT...........................................................................................2150.200.20-0.20---------------------------
...................................................AGATGGATAAGGGAGCCT.....................................................................................................................................................................................1850.200.20-----------------0.20-----------
.................................................................................................................................................................................................ACTGAAGACTCCCACCTTCAGGC..................................2360.170.17-----------------------0.17-----
.........................................................................................................................................................................................ATTACATAACTGAAGACTCC.............................................2060.170.17-----------------0.17-----------
..........................................................................................................................................................................................TTACATAACTGAAGACTCCCAC..........................................2260.170.17---------------------------0.17-
...........................................................................................................................................................................................TACATAACTGAAGACTCCCAC..........................................2160.170.17------------------------0.17----
..............................................................................................................................................................................................ATAACTGAAGACTCCCACC.........................................1960.170.17-----------------0.17-----------
..........................................................................................................................................................................................TTACATAACTGAAGACTCCCACC.........................................2360.170.17--------------------------0.17--
.....................................................................................................................................................................................................AAGACTCCCACCTTCAGGCA.................................2060.170.17-------------------------0.17---
..........................................................................................................................................................................................................................................TTTGTAACTACCTGGC1670.140.14----------------------------0.14

Antisense strand
TCTCTTTTTTTTGTTTGTTTTTATAGATGGGTCAATGCCCATTATCACTCTAGATGGATAAGGGAGCCTTAATTATATACTTATATTTTTGCACTGTCATATTGGAGTGGGGTAAAAATGTTTCTTCTTTTACGTCTAATACTCTTGTTTTTTTTTTTTTTTTTTTTTTTGCTGTGCCCTAAACCATTACATAACTGAAGACTCCCACCTTCAGGCAGGATTGGGTAGTACATGTTTGTAACTACCTGGC
.......................................................................................................(((((((.((((((..........)))))).))....))))).........................................................................................................
............................................................................................93.......................................................................166..................................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189782SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR390725(GSM850204)
small rna immunoprecipitated. (cell line)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR343334DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189783GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
...............................................................................................................................................CTTGTTTTTTTTTTTTTTTTTTTTTTTG............................................................................... 282.000.00---------2.00-------------------
.....................................................................................................................................................................................................AAGACTCCCACCTTCAA.................................... 171.000.00---------------1.00-------------
...............................................................................................................................................AAAAAAAAAAAAAAAAAAAACAAG................................................................................... 2401.001.00---------1.00-------------------
........TTTTGTTTGTTTTTATAGATG............................................................................................................................................................................................................................. 211.000.00-----------1.00-----------------