| (1) B-CELL | (1) BRAIN | (1) BREAST | (14) CELL-LINE | (1) CERVIX | (1) FIBROBLAST | (1) LIVER | (3) OTHER | (3) SKIN | (1) XRN.ip |
| GCTCAACATCTGCCAAAAACTATCTCCAGATGGTGGCAAAATACCCAAAGGTAGGTACTTTTTGGAAGGAAAGGTTAGAAAAATTATCTACTTTGAGCGTGAGTGTACCTGCCACTTAGGGTTTTTGTCTTTCTCACCATTGTAGATATTTTAGATGAGGAGAAGTTCAACGTGGAGTTGATAGTTCAGTGCATC ..............................................................(((..(((((((..((((................((....))...((((.....)))).))))..)))))))..)))........................................................ ............................................................61............................................................................139...................................................... | Size | Perfect hit | Total Norm | Perfect Norm | SRR037940(GSM510478) 293cand5_rep2. (cell line) | SRR037939(GSM510477) 293cand5_rep1. (cell line) | DRR000555(DRX000313) "THP-1 whole cell RNA, no treatment". (cell line) | DRR000556(DRX000314) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | SRR207110(GSM721072) Nuclear RNA. (cell line) | SRR039625(GSM531988) HBV(-) HCV(-) HCC Tissue Sample. (liver) | DRR000558(DRX000316) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | DRR000557(DRX000315) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | SRR037944(GSM510482) 293DcrTN_cand5. (cell line) | SRR330921(SRX091759) tissue: normal skindisease state: normal. (skin) | SRR037937(GSM510475) 293cand2. (cell line) | SRR189785 | SRR191605(GSM715715) 76genomic small RNA (size selected RNA from t. (breast) | SRR189783 | SRR189782 | SRR095854(SRX039177) "miRNA were isolated from FirstChoice Human B. (brain) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR040025(GSM532910) G613T. (cervix) | GSM956925F181A(GSM956925) "cell line: HEK293 cell linepassages: 15-20ip. (cell line) | SRR033715(GSM497060) Mantle Cell Lymphoma (Mino122). (B cell) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR326282(GSM769512) "Dicer mRNA was knocked down using siDicer, t. (cell line) | SRR207116(GSM721078) Nuclear RNA. (cell line) | SRR330907(SRX091745) tissue: normal skindisease state: normal. (skin) | SRR330919(SRX091757) tissue: normal skindisease state: normal. (skin) | SRR363673(GSM830250) cell type: human foreskin fibroblasts (HFF)tr. (fibroblast) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ......................................................................AAGGTTAGAAAAATTATCTACTTTGAGCGT............................................................................................... | 30 | 1 | 34.00 | 34.00 | 20.00 | 14.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................AGGGTTTTTGTCTTT............................................................... | 15 | 0 | 25.00 | 25.00 | - | - | 8.00 | 8.00 | - | - | 5.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................AGGGTTTTTGTCTTTAGA............................................................ | 18 | 0 | 7.00 | 25.00 | - | - | - | - | 7.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................TTTTAGATGAGGAGAAGT............................. | 18 | 1 | 3.00 | 3.00 | - | - | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................AGATATTTTAGATGAGGAGAAG.............................. | 22 | 1 | 2.00 | 2.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................AGGGTTTTTGTCTTTAA............................................................. | 17 | 0 | 2.00 | 25.00 | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................ATGGTGGCAAAATACCCAAAG................................................................................................................................................. | 21 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................AGGGTTTTTGTCTTTAAGA........................................................... | 19 | 0 | 2.00 | 25.00 | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................AAGGAAAGGTTAGAAAAAG............................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | |
| ........TCTGCCAAAAACTATCTCCAA...................................................................................................................................................................... | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | |
| .....................................................................................................................AGGGTTTTTGTCTTTATA............................................................ | 18 | 0 | 1.00 | 25.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................TTGGAAGGAAAGGTTAGAAAAAT............................................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ..............................TGGTGGCAAAATACCCAAAGAT............................................................................................................................................... | 22 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................................................................................TGGAGTTGATAGTTCAGTGC... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .............................................................................................................................................................AGGAGAAGTTCAACGTGGA................... | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .................................................................................................CGTGAGTGTACCTGCC.................................................................................. | 16 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................ATATTTTAGATGAGGAGAA............................... | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................CTTTGAGCGTGAGTGTACCTGCC.................................................................................. | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................TTAGGGTTTTTGTCTTTGC............................................................. | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | |
| ..................................................GTAGGTACTTTTTGGA................................................................................................................................. | 16 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .....................................................................................................................AGGGTTTTTGTCTTTC.............................................................. | 16 | 6 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.17 | 0.17 | 0.17 |
| GCTCAACATCTGCCAAAAACTATCTCCAGATGGTGGCAAAATACCCAAAGGTAGGTACTTTTTGGAAGGAAAGGTTAGAAAAATTATCTACTTTGAGCGTGAGTGTACCTGCCACTTAGGGTTTTTGTCTTTCTCACCATTGTAGATATTTTAGATGAGGAGAAGTTCAACGTGGAGTTGATAGTTCAGTGCATC ..............................................................(((..(((((((..((((................((....))...((((.....)))).))))..)))))))..)))........................................................ ............................................................61............................................................................139...................................................... | Size | Perfect hit | Total Norm | Perfect Norm | SRR037940(GSM510478) 293cand5_rep2. (cell line) | SRR037939(GSM510477) 293cand5_rep1. (cell line) | DRR000555(DRX000313) "THP-1 whole cell RNA, no treatment". (cell line) | DRR000556(DRX000314) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | SRR207110(GSM721072) Nuclear RNA. (cell line) | SRR039625(GSM531988) HBV(-) HCV(-) HCC Tissue Sample. (liver) | DRR000558(DRX000316) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | DRR000557(DRX000315) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | SRR037944(GSM510482) 293DcrTN_cand5. (cell line) | SRR330921(SRX091759) tissue: normal skindisease state: normal. (skin) | SRR037937(GSM510475) 293cand2. (cell line) | SRR189785 | SRR191605(GSM715715) 76genomic small RNA (size selected RNA from t. (breast) | SRR189783 | SRR189782 | SRR095854(SRX039177) "miRNA were isolated from FirstChoice Human B. (brain) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR040025(GSM532910) G613T. (cervix) | GSM956925F181A(GSM956925) "cell line: HEK293 cell linepassages: 15-20ip. (cell line) | SRR033715(GSM497060) Mantle Cell Lymphoma (Mino122). (B cell) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR326282(GSM769512) "Dicer mRNA was knocked down using siDicer, t. (cell line) | SRR207116(GSM721078) Nuclear RNA. (cell line) | SRR330907(SRX091745) tissue: normal skindisease state: normal. (skin) | SRR330919(SRX091757) tissue: normal skindisease state: normal. (skin) | SRR363673(GSM830250) cell type: human foreskin fibroblasts (HFF)tr. (fibroblast) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .........................................................................................................................TTTTTGTCTTTCTCACCAATGA.................................................... | 22 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................ACTTTGAGCGTGAGTGCCTG...................................................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |