ID: uc009xfu.2_intron_0_0_chr1_233201408_r.3p
GENE: (16)
chr1:233201358-233201607-


(3)
CELL-LINE
(1)
HEART
(1)
LIVER
(3)
OTHER
(3)
SKIN

Sense strand
TGCCTAGGAATTTGTCTCCCTTCTGCTGCTATCACTGATACAGATAGGCATAGGGCTATGGTTTTATCTGTGGTATTTGGCTGTTACAGAGAGGTTATGACCTACAATTTTCTGTCTTTTTAGCCTGCGCCTTTCCTGACTTTCAGGCTAGACAGATCAGGGGTTTGTTGATGCTTTTTTTTTTTCTTTTGCTTCTGTAGGTGTTTCTGGGCTACGTGAGGCAAAAATAAAAACAGAGAAACTCACCACA
........................................................................................................................(((((((....((....))....))))))).(((((.((((((......((......))......))))))..)))))....................................................
....................................................................................................................117................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189785SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR343335SRR189786SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
...............................................................................................................................................................................TTTTTTTTTTCTTTTGCTTGGCG....................................................2376.000.0060.0015.001.00--------
..............................................................................................................................................................................TTTTTTTTTTTCTTTTGCTTGGCG....................................................2471.000.0061.007.003.00--------
................................................................................................................................................................................TTTTTTTTTCTTTTGCTTGGCG....................................................2256.000.0043.0011.001.00---1.00----
.................................................................................................................................................................................TTTTTTTTCTTTTGCTTGGCG....................................................2124.000.0022.002.00---------
...............................................................................................................................................................................TTTTTTTTTTCTTTTGCTTGGC.....................................................228.000.007.001.00---------
..............................................................................................................................................................................TTTTTTTTTTTCTTTTGCTTGGC.....................................................238.000.005.003.00---------
...............................................................................................................................................................................TTTTTTTTTTCTTTTGCTTGG......................................................213.000.003.00----------
..............................................................................................................................................................................TTTTTTTTTTTCTTTTGCTTGA......................................................222.000.001.001.00---------
...........................................................................................................................................................................TGCTTTTTTTTTTTCTTTTGTGAG.......................................................242.000.00-2.00---------
..............................................................................................................................................................................TTTTTTTTTTTCTTTTGCAGG.......................................................212.000.00-2.00---------
...................................................................................................................................................................................TTTTTTCTTTTGCTTCTGTAGGTG...............................................2412.002.00-2.00---------
...........................................................................................................................................................................TGCTTTTTTTTTTTCTTTTGGATC.......................................................242.000.001.001.00---------
...............................................................................................................................................................................TTTTTTTTTTCTTTTGCTGGCG.....................................................222.000.002.00----------
..............................................................................................................................................................................TTTTTTTTTTTCTTTTGCTTGG......................................................222.000.002.00----------
...........................................................................................................................................................................TGCTTTTTTTTTTTCTTTTGGACC.......................................................241.000.001.00----------
..............................................................................................................................................................................TTTTTTTTTTTCTTTTGCTTTGCG....................................................241.000.00-1.00---------
..........................................................................................................................................................................ATGCTTTTTTTTTTTCTTAGCC..........................................................221.000.001.00----------
...........................................................................................................................................................................TGCTTTTTTTTTTTCTTAGTT..........................................................211.000.001.00----------
..........................................................................................................................................................................ATGCTTTTTTTTTTTCTTTGGAG.........................................................231.000.00-1.00---------
..............................................................................................................................................................................TTTTTTTTTTTCTTTTGCTGGG......................................................221.000.001.00----------
................................................................................................................................................................................TTTTTTTTTCTTTTGCTTTATA....................................................221.000.001.00----------
..............................................................................................................................................................................TTTTTTTTTTTCTTTTGCTTGTCG....................................................241.000.00-1.00---------
..............................................................................................................................................................................TTTTTTTTTTTCTTTTGCTTTTG.....................................................231.000.001.00----------
..........................................................................................................................................................................ATGCTTTTTTTTTTTCTGGG............................................................201.000.001.00----------
...............................................................................................................................................................................TTTTTTTTTTCTTTTGCTGGGG.....................................................221.000.00-1.00---------
..............................................................................................................................................................................TTTTTTTTTTTCTTTTGCTGGCG.....................................................231.000.001.00----------
.................................................................................................................................................................................TTTTTTTTCTTTTGCTTTTCC....................................................211.000.001.00----------
...........................................................................................................................................................................TGCTTTTTTTTTTTCTTTTCGAG........................................................231.000.00-1.00---------
.................................................................................................................................................................................TTTTTTTTCTTTTGCTTGTGG....................................................211.000.00-1.00---------
.............................................................................................................................................................................CTTTTTTTTTTTCTTTTGGACC.......................................................221.000.001.00----------
...........................................................................................................................................................................TGCTTTTTTTTTTTCTTTTGGC.........................................................221.000.001.00----------
...........................................................................................................................................................................TGCTTTTTTTTTTTCTTTTCTAG........................................................231.000.00-1.00---------
...............................................................................................................................................................................TTTTTTTTTTCTTTTGCTTGGCA....................................................231.000.00-1.00---------
..........................................................................................................................................................................ATGCTTTTTTTTTTTCGAG.............................................................191.000.001.00----------
..........................................................................................................................................................................ATGCTTTTTTTTTTTCTTTTGACAG.......................................................251.000.00-1.00---------
...........................................................................................................................................................................TGCTTTTTTTTTTTCTTTTCAGC........................................................231.000.001.00----------
............................................................................................................................................................................GCTTTTTTTTTTTCTTTCGGG.........................................................211.000.00-1.00---------
..................................................................................................................................................................................TTTTTTTCTTTTGCTTCTGGATG.................................................231.000.00-1.00---------
...........................................................................................................................................................................TGCTTTTTTTTTTTCTTTTGGGTC.......................................................241.000.001.00----------
..............................................................................................................................................................................TTTTTTTTTTTCTTTTGCTTGTTT....................................................241.000.001.00----------
...............................................................................................................................................................................TTTTTTTTTTCTTTTGCTTGGA.....................................................221.000.001.00----------
...............................................................................................................................................................................TTTTTTTTTTCTTTTGCTTTTCC....................................................231.000.00-1.00---------
...............................................................................................................................................................................TTTTTTTTTTCTTTTGCTTTGGG....................................................231.000.001.00----------
.........................................AGATAGGCATAGGGCTATGGTCT..........................................................................................................................................................................................231.000.00-1.00---------
...............................................................................................................................................................................TTTTTTTTTTCTTTTGCTTTTTC....................................................231.000.001.00----------
..........................................................................................................................................................................ATGCTTTTTTTTTTTCTTTTGGAC........................................................241.000.00-1.00---------
..............................................................................................................................................................................TTTTTTTTTTTCTTTTGCGCTG......................................................221.000.00-1.00---------
..............................................................................................................................................................................TTTTTTTTTTTCTTTTGCTTCTC.....................................................231.000.00-1.00---------
..............................................................................................................................................................................TTTTTTTTTTTCTTTTGCTTTAAG....................................................241.000.001.00----------
..............................................................................................................................................................................TTTTTTTTTTTCTTTTGCTTAGG.....................................................231.000.001.00----------
....................TTCTGCTGCTATCACTCCTG..................................................................................................................................................................................................................201.000.00---1.00-------
...............................................................................................................................................................................TTTTTTTTTTCTTTTGCTTCCTAG...................................................241.000.001.00----------
..............................................................................................................................................................................TTTTTTTTTTTCTTTTGCTTAGGG....................................................241.000.00-1.00---------
..............................................................................................................................................................................TTTTTTTTTTTCTTTTGCTTAAGC....................................................241.000.00-1.00---------
..........................................................................................................................................................................ATGCTTTTTTTTTTTCTTTCCT..........................................................221.000.001.00----------
................................................................................................................................................................................TTTTTTTTTCTTTTGCTTACGG....................................................221.000.001.00----------
..........................................................................................................................................................................ATGCTTTTTTTTTTTCGGCT............................................................201.000.00-1.00---------
..............................................................................................................................................................................TTTTTTTTTTTCTTTTGCTTTTCC....................................................241.000.001.00----------
...............................................................................................................................................................................TTTTTTTTTTCTTTTGCTTTGCG....................................................231.000.001.00----------
..............................................................................................................................................................................TTTTTTTTTTTCTTTTGCAGGG......................................................221.000.00-1.00---------
..........................................................................................................................GCCTGCGCCTTTCCTT................................................................................................................161.000.001.00----------
..............................................................................................................................................................................TTTTTTTTTTTCTTTTGCTTTTCT....................................................241.000.00-1.00---------
............................................................................................................................................................................GCTTTTTTTTTTTCTTTTGCTTTGG.....................................................251.000.001.00----------
..............................................................................................................................................................................TTTTTTTTTTTCTTTTGCGCAG......................................................221.000.001.00----------
................................................................................................................................................................................TTTTTTTTTCTTTTGCTTGGCT....................................................221.000.00-1.00---------
...............................................................................................................................................................................TTTTTTTTTTCTTTTGCTTCGGT....................................................231.000.00-1.00---------
..............TCTCCCTTCTGCTGCTACACT.......................................................................................................................................................................................................................211.000.00-----1.00-----
.............................................................................................................................................................................CTTTTTTTTTTTCTTTTGCTTCTGCAGG.................................................281.000.00-1.00---------
.........................................................................................................................AGCCTGCGCCTTTCCTGGGG.............................................................................................................201.000.001.00----------
............................................................................................................................................................................GCTTTTTTTTTTTCTTTTGGC.........................................................211.000.001.00----------
.......................................................CTATGGTTTTATCTGTGGTATTTGG..........................................................................................................................................................................2511.001.00----1.00------
.................................................................................................................................................................................TTTTTTTTCTTTTGCTTCCAG....................................................211.000.001.00----------
.............................................................................................................................................................................CTTTTTTTTTTTCTTTTGGGTC.......................................................221.000.00-1.00---------
..........................................................................................................................................................................ATGCTTTTTTTTTTTCGGC.............................................................191.000.001.00----------
...........................................................................................................................................................................TGCTTTTTTTTTTTCTTTTGCCC........................................................231.000.00-1.00---------
...............................................................................................................................................................................TTTTTTTTTTCTTTTGCTTTTG.....................................................221.000.00---1.00-------
................................................................................................................................................................................TTTTTTTTTCTTTTGCTTGACG....................................................221.000.00-1.00---------
....................TTCTGCTGCTATCACTG.....................................................................................................................................................................................................................1720.500.50---0.50-------
...................CTTCTGCTGCTATCACT......................................................................................................................................................................................................................1720.500.50--------0.50--
...................................................................................................................................................................................................TGTAGGTGTTTCTGGGC......................................1720.500.50---------0.50-
.............................................................................................................................................................................CTTTTTTTTTTTCTTTTGCTTTGGT....................................................2560.170.170.17----------
.............................................................................................................................................................................CTTTTTTTTTTTCTTTTGCTTTCC.....................................................2460.170.170.17----------
.............................................................................................................................................................................CTTTTTTTTTTTCTTTTGCTT........................................................2160.170.17--0.17--------
..............................................................................................................................................................................TTTTTTTTTTTCTTTTGCTTC.......................................................2170.140.14-0.14---------

Antisense strand
TGCCTAGGAATTTGTCTCCCTTCTGCTGCTATCACTGATACAGATAGGCATAGGGCTATGGTTTTATCTGTGGTATTTGGCTGTTACAGAGAGGTTATGACCTACAATTTTCTGTCTTTTTAGCCTGCGCCTTTCCTGACTTTCAGGCTAGACAGATCAGGGGTTTGTTGATGCTTTTTTTTTTTCTTTTGCTTCTGTAGGTGTTTCTGGGCTACGTGAGGCAAAAATAAAAACAGAGAAACTCACCACA
........................................................................................................................(((((((....((....))....))))))).(((((.((((((......((......))......))))))..)))))....................................................
....................................................................................................................117................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189785SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR343335SRR189786SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.............................................................................................................................................................................CTTTTTTTTTTTCTTTTGTCCG....................................................... 221.000.00-------1.00---
.GAGACAAATTCCTAGGC........................................................................................................................................................................................................................................ 1770.290.29----------0.29