ID: uc009xal.1_intron_0_0_chr1_203186262_r.5p
GENE: CHIT1(5)
chr1:203186667-203186916-


(1)
B-CELL
(1)
BRAIN
(4)
CELL-LINE
(4)
CERVIX
(1)
HEART
(2)
OTHER

Sense strand
CTGCAACCAGGGCCGATACCCCCTCATCCAGACGCTACGGCAGGAACTGAGTAAGTAAGGGGCCCAGGGCCAGTGGTGGAATTTGGAGGTGGGGTACAAACACAGCTCCATGCATCCAATGAACTGTAGGTCCCGGGTCCTTCTGAGGAAATGACTTTGCCCCAATACTGTAATTTCCCAAGCTTCATGTACCCGCAGGAGCTAAGGAAACTGTCAAAACAATTTTCCTTTTTGCGGTCTTTCTCTTCCT
.............................................................(((...)))((((..((((...(((((.((..((....)).)).)))))....))))....))))............................................................................................................................
.............................................................62...............................................................127.........................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189783SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR189785SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040040(GSM532925)
G612N. (cervix)
SRR040038(GSM532923)
G531N. (cervix)
SRR040012(GSM532897)
G648N. (cervix)
SRR040035(GSM532920)
G001T. (cervix)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
...........................................................................................................................CTGTAGGTCCCGGGT................................................................................................................151108.00108.0099.00-6.002.00-----1.00---
..................................................................................................................................................................................................GCAGGAGCTAAGGAAACTGTCAA.................................2314.004.00-4.00-----------
.................................GCTACGGCAGGAACTGAGTC.....................................................................................................................................................................................................202.000.00-2.00-----------
....................................................................................................................................................................................................AGGAGCTAAGGAAACTGTCAAAA...............................2312.002.00-2.00-----------
....................................................................................................CACAGCTCCATGCATCCAATGCA...............................................................................................................................231.000.00--------1.00----
..................................................................GGGCCAGTGGTGGAATGG......................................................................................................................................................................181.000.00----------1.00--
..................................................................................................................................................................................................GCAGGAGCTAAGGAAACTGT....................................2011.001.00-1.00-----------

Antisense strand
CTGCAACCAGGGCCGATACCCCCTCATCCAGACGCTACGGCAGGAACTGAGTAAGTAAGGGGCCCAGGGCCAGTGGTGGAATTTGGAGGTGGGGTACAAACACAGCTCCATGCATCCAATGAACTGTAGGTCCCGGGTCCTTCTGAGGAAATGACTTTGCCCCAATACTGTAATTTCCCAAGCTTCATGTACCCGCAGGAGCTAAGGAAACTGTCAAAACAATTTTCCTTTTTGCGGTCTTTCTCTTCCT
.............................................................(((...)))((((..((((...(((((.((..((....)).)).)))))....))))....))))............................................................................................................................
.............................................................62...............................................................127.........................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189783SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR189785SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040040(GSM532925)
G612N. (cervix)
SRR040038(GSM532923)
G531N. (cervix)
SRR040012(GSM532897)
G648N. (cervix)
SRR040035(GSM532920)
G001T. (cervix)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
..................................................GTAAGTAAGGGGCCCCCCA..................................................................................................................................................................................... 191.000.00-----1.00-------
....................................................................................................CACAGCTCCATGCATGCA.................................................................................................................................... 181.000.00----1.00--------
....................................................AAGTAAGGGGCCCAGGGCGTGA................................................................................................................................................................................ 221.000.00------1.00------
....................................................AAGTAAGGGGCCCAGGGCCTGC................................................................................................................................................................................ 221.000.00-------1.00-----
...................................................................................................................................TCAGAAGGACCCGGG........................................................................................................ 1560.170.17------------0.17