ID: uc009wty.2_intron_2_0_chr1_161093737_r
GENE: (2)
chr1:161093687-161093977-


(5)
B-CELL
(6)
BRAIN
(5)
BREAST
(13)
CELL-LINE
(4)
CERVIX
(5)
HEART
(1)
HELA
(1)
KIDNEY
(6)
LIVER
(2)
OTHER
(2)
RRP40.ip
(43)
SKIN
(1)
TESTES
(2)
XRN.ip

Sense strand
CACTCGCCACGACCTGCTGCCCTACGTCACCCTCAAGAGGAGACGGGCTGGTGAGGAAGTATTAGGGGCTGGAATCAGGGAAGAGTTGTGGGAGGCCAGGAAGGAGCAGCATAGGCGTCCAAAGGGGAGGACACATTGATCCTGGGGAGTACTTAGAGTAAGTTGTGAGGCCCACTGGGGGTTTGGACTGACAGAAGGGAAGGGTGTATATTTTCCTGAATGATTACTTCTCCTCCTACAGTGTGCCCTGATCTTGTAGACAAGTATCTGGAGGAGACATCAATTCGCTAT
..........................................................................((((((....(((((......((.....)).)))))......((((........)))).......))))))..................................................................................................................................................
..........................................................................75..........................................................................151..........................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR553576(SRX182782)
source: Testis. (testes)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189784SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191478(GSM715588)
30genomic small RNA (size selected RNA from t. (breast)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR191480(GSM715590)
38genomic small RNA (size selected RNA from t. (breast)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR040037(GSM532922)
G243T. (cervix)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)
SRR037937(GSM510475)
293cand2. (cell line)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR040008(GSM532893)
G727N. (cervix)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
DRR001483(DRX001037)
"Hela long cytoplasmic cell fraction, control. (hela)
SRR191618(GSM715728)
148genomic small RNA (size selected RNA from . (breast)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR038862(GSM458545)
MM472. (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR040035(GSM532920)
G001T. (cervix)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040015(GSM532900)
G623T. (cervix)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
...............................................................................................................................AGGACACATTGATCCTCGAC................................................................................................................................................20215.000.50-4.00---------2.00-----2.00---1.00---------------1.00----------1.00-----------------------1.00-1.00-1.00-------1.00--------
...............................................................................................................................AGGACACATTGATCCTCGA.................................................................................................................................................19214.000.50-5.00---1.00---1.00--------1.00---1.00--------2.00---------1.00-------------1.00--------1.00----------------------------
................................................................................................................................GGACACATTGATCCTCGAC................................................................................................................................................197.000.00-2.00-------1.00----1.001.00-------------1.00-----------------------------------1.00---------------------------
................................................................................................................................GGACACATTGATCCTCGA.................................................................................................................................................187.000.00-1.00----1.00---2.00-----1.00----1.00-----------------------------------------1.00-----------------------------
..............................................................................................................................GAGGACACATTGATCATCG..................................................................................................................................................1926.001.00-------2.00-------1.001.00-----------1.00------------------1.00---------------------------------------------
..............................................................................................................................GAGGACACATTGATCATC...................................................................................................................................................1826.001.00-----1.00-------1.00------1.00-------1.00---1.00-------------------------------------1.00----------------------
.............................................................................................................................................................................................................................................................TTGTAGACAAGTATCTGGAGGAGACATC..........2816.006.006.00--------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................GTAGACAAGTATCTGGAGGAGACAT...........2515.005.00---3.00---------------------------------------1.00-------------------------------------1.00-----------
..............................................................................................................................................................................................................................................................TGTAGACAAGTATCTGGAGGAGACATC..........2715.005.005.00--------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................TTGTAGACAAGTATCTGGAGGAGAC.............2515.005.004.00-----------1.00--------------------------------------------------------------------------------
...............................................................................................................................AGGACACATTGATCCTCG..................................................................................................................................................1825.000.50-1.00-------1.00-2.00---------------------------------------------------------------------------1.00-----
...............................................................................................................................AGGACACATTGATCCTC...................................................................................................................................................1724.000.50-------------1.00-1.00-------------------------------------1.00---1.00-----------------------------------
...............................................................................................................................AGGACACATTGATCCGAC..................................................................................................................................................184.000.00-----1.00-------------------1.00----------1.00----------------------------------1.00---------------------
................................................................................................................................................................................................................................................................TAGACAAGTATCTGGAGGAGACATC..........2513.003.003.00--------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................TGATCTTGTAGACAAGTATCTGGAGGAGAC.............3013.003.003.00--------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................GTAGACAAGTATCTGGAGGAGACA............2413.003.00---2.00---------------------------------------------------------------------------1.00-------------
.............................................................................................................................................................................................................................................................TTGTAGACAAGTATCTGGAGGAGACA............2613.003.001.00---------------------1.00----------------------------1.00-----------------------------------------
................................................................................................................................GGACACATTGATCCTCG..................................................................................................................................................173.000.00---------1.00-------------------1.00------------1.00--------------------------------------------------
........................................................................................................................................................................................................................................................TGATCTTGTAGACAAGTATCTGGAGGA................2713.003.003.00--------------------------------------------------------------------------------------------
...............................................................................................................................AGGACACATTGATCCGACA.................................................................................................................................................193.000.00-1.00------------1.00---------1.00--------------------------------------------------------------------
........................................................................................................................................................................................................................................................TGATCTTGTAGACAAGTATCTGGAGGAGA..............2912.002.00--1.00-----------------------------------------------------------------------------1.00------------
..............................................................................................................................................................................................................................................................TGTAGACAAGTATCTGGAGGAGACATCAATTCG....3312.002.00----2.00----------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................TGTAGACAAGTATCTGGAGGAGACATCAATTCGC...3412.002.00----2.00----------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................TGATCTTGTAGACAAGTA.........................1812.002.00--------------------------2.00------------------------------------------------------------------
...............................................................................................................................AGGACACATTGATCCGA...................................................................................................................................................172.000.00----------2.00----------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................TGTAGACAAGTATCTGGAGGAGACA............2512.002.00-------------------1.00-----------------------------1.00-------------------------------------------
......................................................................................................................................................................................................................................................CCTGATCTTGTAGACAAGTATCTGG....................2512.002.002.00--------------------------------------------------------------------------------------------
.............................................................................................................................GGAGGACACATTGATC......................................................................................................................................................1612.002.00-------1.00------1.00------------------------------------------------------------------------------
.............................................................................................................................GGAGGACACATTGATCA.....................................................................................................................................................1711.002.00-----1.00---------------------------------------------------------------------------------------
...........................CACCCTCAAGAGGAGACGGGCTGT................................................................................................................................................................................................................................................241.000.001.00--------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................AAGTATCTGGAGGAGAC.............1711.001.00------------------------------------------------------------------------------1.00--------------
.............................CCCTCAAGAGGAGACGGGCTGTGTG.............................................................................................................................................................................................................................................251.000.001.00--------------------------------------------------------------------------------------------
..................................AAGAGGAGACGGGCTGTG...............................................................................................................................................................................................................................................181.000.00------------1.00--------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................TAGACAAGTATCTGGAGGAGACATCAAT.......2811.001.001.00--------------------------------------------------------------------------------------------
..............................................................................................................................GAGGACACATTGATCGACA..................................................................................................................................................1921.001.00----------------1.00----------------------------------------------------------------------------
..............................CCTCAAGAGGAGACGGGCTG.................................................................................................................................................................................................................................................2011.001.00----------------------------------------------1.00----------------------------------------------
........................................................................................................................................................................................................................................................TGATCTTGTAGACAAGTATCTGGAGG.................2611.001.00------------------------1.00--------------------------------------------------------------------
...............................................................................................................................AGGACACATTGATCCGG...................................................................................................................................................171.000.00-------------1.00-------------------------------------------------------------------------------
..........................................................................................................................................................................CCCACTGGGGGTTTGGACTGACAGAAGGG............................................................................................2911.001.00-------------------------------------------------------------1.00-------------------------------
..............................................................................................................................GAGGACACATTGATCAT....................................................................................................................................................1721.001.00-------1.00-------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................TGTAGACAAGTATCTGGAGGAGATA............251.000.00------------------------------1.00--------------------------------------------------------------
.............................................................................................................................................................................................................................................................TTGTAGACAAGTATCTGGAGGAGACATCAAT.......3111.001.001.00--------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................TCTTGTAGACAAGTATCTGGAGGAGA..............2611.001.001.00--------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................GTATCTGGAGGAGACATCAAT.......2111.001.00----------------------------------------------------1.00----------------------------------------
..........................................................................................................................................................................................................................................................ATCTTGTAGACAAGTATCTGGAGGAG...............2611.001.00--------1.00------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................AGACAAGTATCTGGAGGAGACATA..........241.000.00-----------------------------------------------------------------------------1.00---------------
...............................................................................................................................AGGACACATTGATCCACG..................................................................................................................................................181.000.00-----------------1.00---------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................AGACAAGTATCTGGAGGAGACA............2211.001.00----------------------------------------------------------------------------------1.00----------
.............................................................................................................................................................................................................................................................TTGTAGACAAGTATCTGGAGGAGA..............2411.001.00--1.00------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................CTTGTAGACAAGTATCTGGAGGAGATA............271.000.00--1.00------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................TGTAGACAAGTATCTGGAGGAGACATCAA........2911.001.00------------------------------1.00--------------------------------------------------------------
................................................................................................................................................................................................................................................................TAGACAAGTATCTGGAGGAGACATCAATTC.....3011.001.001.00--------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................GATCTTGTAGACAAGTATCTGGAGGAGAC.............2911.001.00--1.00------------------------------------------------------------------------------------------
...............................................................................GAAGAGTTGTGGGAGGATT.................................................................................................................................................................................................191.000.00--1.00------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................AGACAAGTATCTGGAGGAGACATCAA........2611.001.00------------------------------------------------------1.00--------------------------------------
........................................................................................................................................................................................................................................................TGATCTTGTAGACAAGTATCTGG....................2311.001.00-----------------------------------------------------------------------------------1.00---------
...........................................................................................................................................................................................................................................................TCTTGTAGACAAGTATCTGGAGGAGACATCA.........3111.001.00--1.00------------------------------------------------------------------------------------------
...............................................................................................................................AGGACACATTGATCCGGCC.................................................................................................................................................191.000.00------------------1.00--------------------------------------------------------------------------
............................ACCCTCAAGAGGAGACGGGCTG.................................................................................................................................................................................................................................................2211.001.00---------------------------------------------------------------------------1.00-----------------
..............................................................................................GCCAGGAAGGAGCAGGGGT..................................................................................................................................................................................191.000.00--------------------------------------------------------------------------------------1.00------
.............................................................................................................................................................................................................................................................TTGTAGACAAGTATCTGGAGGAGACATA..........2811.001.00--1.00------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................GTAGACAAGTATCTGGAGGAGACATCAATTCG....3211.001.00----1.00----------------------------------------------------------------------------------------
.......................................................................................................................CAAAGGGGAGGACACATTG.........................................................................................................................................................1911.001.00-----------------------------------1.00---------------------------------------------------------
.................................................................................................................................................................................................GAAGGGAAGGGTGTACGCG...............................................................................191.000.00----------------------------------------------------------1.00----------------------------------
..................................AAGAGGAGACGGGCTGTGT..............................................................................................................................................................................................................................................191.000.00-------------------1.00-------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................TCTGGAGGAGACATCAATTCGCT..2311.001.00---------------------------------1.00-----------------------------------------------------------
..............................................................................................................................................................................................................................................................TGTAGACAAGTATCTGGAGGAGACATCA.........2811.001.00--1.00------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................AGTGTGCCCTGATCTCTG..................................181.000.00----------------------------------1.00----------------------------------------------------------
................................................................................................................................GGACACATTGATCCTTGAT................................................................................................................................................191.000.00-------------------------------------------------------------------------1.00-------------------
.......................................................................................................................................................................................TGGACTGACAGAAGG.............................................................................................1581.001.00---------------------------------0.380.120.120.12-------------------------------------------------------0.25
..............................................................................................................................GAGGACACATTGATCGAGC..................................................................................................................................................1921.001.00--------------------1.00------------------------------------------------------------------------
........ACGACCTGCTGCCCTACGTCACC....................................................................................................................................................................................................................................................................2311.001.00---------------------------------------------1.00-----------------------------------------------
...............................................................................................................................................................................................................................................................GTAGACAAGTATCTGGAGGAGACATCA.........2711.001.00--------1.00------------------------------------------------------------------------------------
...............................................................................................................................AGGACACATTGATCCTCGCC................................................................................................................................................2021.000.50--------------------------------------------------------1.00------------------------------------
...........ACCTGCTGCCCTACGTCACCCTCAAG..............................................................................................................................................................................................................................................................2611.001.00--------------------------------------------------------------1.00------------------------------
................................................................................................................................................................................................................................................................TAGACAAGTATCTGGAGG.................1811.001.00-----------------------1.00---------------------------------------------------------------------
......................................GGAGACGGGCTGGTGAAGCT.........................................................................................................................................................................................................................................201.000.00--------------------------------------------------1.00------------------------------------------
...................................................................................................................................................................TGTGAGGCCCACTGGGGGTTTGGACTGACAGAAGG.............................................................................................3511.001.00--------1.00------------------------------------------------------------------------------------
...............................CTCAAGAGGAGACGGGCTGTGTG.............................................................................................................................................................................................................................................231.000.00---------------------------1.00-----------------------------------------------------------------
..................................AAGAGGAGACGGGCTGTGTT.............................................................................................................................................................................................................................................201.000.00------------------------------------------------------------------1.00--------------------------
........................................................................................................................................................................................................................................................TGATCTTGTAGACAAGTATCTGGAGGAG...............2811.001.001.00--------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................AGTATCTGGAGGAGACATCAATTCG....2511.001.00--1.00------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................GTAGACAAGTATCTGGAGGAGA..............2211.001.00--------------------------------------------------------------------1.00------------------------
..................................AAGAGGAGACGGGCTGTGTG.............................................................................................................................................................................................................................................201.000.00---------------------------1.00-----------------------------------------------------------------
.............................................................................................................................................................................................................................................................TTGTAGACAAGTATCTGGAGGAGAAA............2611.001.00------------1.00--------------------------------------------------------------------------------
..............................................................................................................................GAGGACACATTGATC......................................................................................................................................................1521.001.00------------------0.50----------------------------------------------------------------------0.50---
..........................................................................................................................................................................................................................................................ATCTTGTAGACAAGTATCTGGAGGAGACAT...........3011.001.00-----------------------------------------------------------1.00---------------------------------
.................................................................................................................................................................................GGGGTTTGGACTGACAGAAGGGA...........................................................................................2311.001.00------------------------------------------------------------1.00--------------------------------
................................................................................................................................................................................GGGGGTTTGGACTGATTTA................................................................................................191.000.00-------------------------------------------------------------------------------------1.00-------
..............................................................................................................................................................................................................................................................TGTAGACAAGTATCTGGAGGAGACATA..........271.000.00--1.00------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................TTGTAGACAAGTATCTGGAGGAGACAT...........2711.001.001.00--------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................TGATCTTGTAGACAAGTAT........................1911.001.00----------------------------------------------------------------------------------------1.00----
...................................................................................................................................................................................................................TTTCCTGAATGATTACTTCTCCTCCTACA...................................................2911.001.00---------------------------------------------------------------------1.00-----------------------
..............................................................................................................................GAGGACACATTGATCGTC...................................................................................................................................................1821.001.00--------------------------------------------1.00------------------------------------------------
...........................................................................................................................................................................................................................................................TCTTGTAGACAAGTAT........................1630.670.67------------------------------------------------------------------------------------------0.330.33-
...............................................................................................................................AGGACACATTGATCCT....................................................................................................................................................1620.500.50--------------------------------0.50------------------------------------------------------------

Antisense strand
CACTCGCCACGACCTGCTGCCCTACGTCACCCTCAAGAGGAGACGGGCTGGTGAGGAAGTATTAGGGGCTGGAATCAGGGAAGAGTTGTGGGAGGCCAGGAAGGAGCAGCATAGGCGTCCAAAGGGGAGGACACATTGATCCTGGGGAGTACTTAGAGTAAGTTGTGAGGCCCACTGGGGGTTTGGACTGACAGAAGGGAAGGGTGTATATTTTCCTGAATGATTACTTCTCCTCCTACAGTGTGCCCTGATCTTGTAGACAAGTATCTGGAGGAGACATCAATTCGCTAT
..........................................................................((((((....(((((......((.....)).)))))......((((........)))).......))))))..................................................................................................................................................
..........................................................................75..........................................................................151..........................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR553576(SRX182782)
source: Testis. (testes)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189784SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191478(GSM715588)
30genomic small RNA (size selected RNA from t. (breast)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR191480(GSM715590)
38genomic small RNA (size selected RNA from t. (breast)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR040037(GSM532922)
G243T. (cervix)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)
SRR037937(GSM510475)
293cand2. (cell line)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR040008(GSM532893)
G727N. (cervix)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
DRR001483(DRX001037)
"Hela long cytoplasmic cell fraction, control. (hela)
SRR191618(GSM715728)
148genomic small RNA (size selected RNA from . (breast)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR038862(GSM458545)
MM472. (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR040035(GSM532920)
G001T. (cervix)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040015(GSM532900)
G623T. (cervix)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
..........TGAGGGTGACGTAGGGCAGCAGGTC................................................................................................................................................................................................................................................................ 2515.005.005.00--------------------------------------------------------------------------------------------
...............AGGGTGACGTAGGGCAGC.................................................................................................................................................................................................................................................................. 1823.003.00------3.00--------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................TACAAGATCAGGGCACACTGTAGGAGGA................................. 2812.002.002.00--------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................GGGCACACTGTAGGAGGA........................................... 1811.001.00-------------1.00-------------------------------------------------------------------------------
..................................................................................................................................................................................................................................TCAGGGCACACTGTAGGAGGAGAAG........................................ 2511.001.001.00--------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................TCTCCTCCTACAGTGTGG............................................. 181.000.00-------------------------1.00-------------------------------------------------------------------
....................................................................................................................................................................................................................................TACAAGATCAGGGCACACTGTAGGAGGAGA................................. 3011.001.001.00--------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................ATTACTTCTCCTCCTACAGTGTGCCCA.......................................... 271.000.00--1.00------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................TCTCCTCCTACAGTGGTC............................................. 181.000.00-----------------------1.00---------------------------------------------------------------------
.........................................................................................................................................................................................................................................TACAAGATCAGGGCACACTGTAGGA................................. 2511.001.001.00--------------------------------------------------------------------------------------------
.........................................................TCCCTGATTCCAGCCCCTAATACT.................................................................................................................................................................................................................. 2411.001.00---------------------------------------1.00-----------------------------------------------------
......TGAGGGTGACGTAGGGCAGCAGGTCGTGG................................................................................................................................................................................................................................................................ 2911.001.001.00--------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................TACAAGATCAGGGCACACTGTAGGAGG................................. 2711.001.001.00--------------------------------------------------------------------------------------------
.................................................................................................AGGAAGGAGCAGCATCCA................................................................................................................................................................................ 181.000.00-------------------------------------------------------------------1.00-------------------------
..............................................................................................................................................................................................................................................CAGTGTGCCCTGATCTTGAG................................. 201.000.00------------1.00--------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................TACAAGATCAGGGCACACTGTAGG................................. 2411.001.001.00--------------------------------------------------------------------------------------------
..................TCTCCTCTTGAGGGTGACGTAGGGC........................................................................................................................................................................................................................................................ 2511.001.001.00--------------------------------------------------------------------------------------------
.......GTGACGTAGGGCAGCAGGTCGTG..................................................................................................................................................................................................................................................................... 2311.001.00--------------------------------------1.00------------------------------------------------------
.....................................................................................................................................................................................................................................TCAGGGCACACTGTAGGAGGAG........................................ 2211.001.00--------1.00------------------------------------------------------------------------------------
.....GGGTGACGTAGGGCAGCAGGTCGTGGC................................................................................................................................................................................................................................................................... 2711.001.001.00--------------------------------------------------------------------------------------------
.....................CTTGAGGGTGACGTAG.............................................................................................................................................................................................................................................................. 1611.001.001.00--------------------------------------------------------------------------------------------
......GAGGGTGACGTAGGGCAGCAGGTCGTGG................................................................................................................................................................................................................................................................. 2811.001.001.00--------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................TCAGGGCACACTGTAGGAGGAGAAGT........................................ 2611.001.001.00--------------------------------------------------------------------------------------------
...............................................TAATACTTCCTCACCAG................................................................................................................................................................................................................................... 1711.001.00----------------------------------------1.00----------------------------------------------------
......AGGGCAGCAGGTCGTGG............................................................................................................................................................................................................................................................................ 1720.500.500.50--------------------------------------------------------------------------------------------
...............GGGTGACGTAGGGCAGC................................................................................................................................................................................................................................................................... 1720.500.500.50--------------------------------------------------------------------------------------------
......................................................................................................................ATGTGTCCTCCCCTTTGG........................................................................................................................................................... 1830.330.33-------------------0.33-------------------------------------------------------------------------