ID: uc009wtj.1_intron_13_0_chr1_160305113_r.5p
GENE: COPA(2)
chr1:160309771-160310020-


(4)
AGO2.ip 		(6)
B-CELL 		(2)
BRAIN 		(10)
BREAST 		(40)
CELL-LINE 		(6)
CERVIX 		(3)
FIBROBLAST 		(7)
HEART 		(8)
HELA 		(1)
KIDNEY 		(4)
LIVER 		(2)
OTHER 		(2)
RRP40.ip 		(36)
SKIN 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
ATGGGACTATCGGATGTGCACTCTCATTGACAAGTTTGATGAACATGATGGTGAGATATTTCTAGGAGGAAGTTAAAGGAGTATAAGTATTTATAATATCCTGGGGTATTTTAAGCCTTGTTTGACATGGATTCCTCTATGATTAAAGAATGTGGAAATGATAGAACTGAAAAATCCTGAATAGGAATCACCTTAGAGATTAGAAAGGATAGCTCTGTCTAACATACATTGCCTGCCTTCTCCACCAGGT
...................................................(((((((.((((((((....((((...(((((....))))).)))).))))))))))))))).((.((.(((((((((((....)))))).))))).)).)).................................................................................................
..................................................51............................................................................................................161.......................................................................................
SizePerfect hitTotal NormPerfect NormDRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR189782DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR207117(GSM721079)
Whole cell RNA. (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR037938(GSM510476)
293Red. (cell line)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR553575(SRX182781)
source: Kidney. (Kidney)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR029124(GSM416753)
HeLa. (hela)		SRR037935(GSM510473)
293cand3. (cell line)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR189787SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		GSM359205(GSM359205)
HepG2_nucl_up. (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029125(GSM416754)
U2OS. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR037936(GSM510474)
293cand1. (cell line)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM359204(GSM359204)
HepG2_nucl_low. (cell line)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		GSM359191(GSM359191)
HepG2_3pM_5. (cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		GSM359203(GSM359203)
hepg2_untreated_b. (cell line)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		GSM359190(GSM359190)
HepG2_3pM_4. (cell line)		DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)		GSM359173(GSM359173)
hela_10_1. (hela)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577580(Rovira)
total RNA. (breast)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM532876(GSM532876)
G547T. (cervix)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR040016(GSM532901)
G645N. (cervix)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		GSM359192(GSM359192)
HepG2_3pM_6. (cell line)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191556(GSM715666)
45genomic small RNA (size selected RNA from t. (breast)		SRR040036(GSM532921)
G243N. (cervix)		GSM359207(GSM359207)
HepG2_tot_up. (cell line)		SRR191408(GSM715518)
88genomic small RNA (size selected RNA from t. (breast)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR189785SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)		GSM359193(GSM359193)
HepG2_3pM_7. (cell line)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR038858(GSM458541)
MEL202. (cell line)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR040039(GSM532924)
G531T. (cervix)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR040025(GSM532910)
G613T. (cervix)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR038854(GSM458537)
MM653. (cell line)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		SRR191617(GSM715727)
104genomic small RNA (size selected RNA from . (breast)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR040038(GSM532923)
G531N. (cervix)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		GSM359206(GSM359206)
HepG2_tot_low. (cell line)		SRR038860(GSM458543)
MM426. (cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		TAX577589(Rovira)
total RNA. (breast)		TAX577744(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		GSM359189(GSM359189)
HepG2_2pm_3. (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR191591(GSM715701)
53genomic small RNA (size selected RNA from t. (breast)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.....................................................................................................................................CCTCTATGATTAAAGAATGTGGAAATGATA.......................................................................................30181.0081.0035.0017.00---2.00---2.00----1.00----1.00----2.003.001.00-------2.00--2.00--1.00-1.00------1.00---1.00--2.001.001.00----------1.00-----1.00---------1.00------------1.00--------------------------1.00---
......................................................................................................................................CTCTATGATTAAAGAATGTGGAAATGATA.......................................................................................29170.0070.0032.0018.004.002.00-------2.00-1.00-----------------3.00-------------2.00------2.00----1.00------------------------------------------1.001.00-1.00-------------------------
.................................................................................................................................................AAGAATGTGGAAATGATAGAACTGAAA..............................................................................27146.0046.0010.005.00-10.00--2.00--1.00--5.00-2.00-1.00----------------1.00-----1.00--1.00----------1.00------1.00-------------1.00--1.00---------1.00------------------1.00---------------1.00------
.....ACTATCGGATGTGCACTCTCATT..............................................................................................................................................................................................................................23136.0036.00----1.00-1.00------2.002.00--1.003.00--3.00-2.00--1.00-3.00---1.002.00--1.00----1.00--1.00---------2.00------------------1.00----1.00-----1.00---1.00---1.00-1.00----1.00---------1.00----1.00--------------
......................................................................................................................................CTCTATGATTAAAGAATGTGGAA.............................................................................................23125.0025.00--25.00------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................AAGAATGTGGAAATGATAGAACTGAAAA.............................................................................28120.0020.002.003.00-6.00-3.00---1.00---------1.00-------------------1.00----------------------------------------------1.00----------------------------1.00----1.00--------
.....ACTATCGGATGTGCACTCTCAT...............................................................................................................................................................................................................................22117.0017.00-------------1.00---3.00----1.00---1.00---1.00-----1.00-2.00--1.00--------1.00-------------1.00-------1.00---------1.00---------------------1.00-------------------1.00----
.................................................................................................................................................AAGAATGTGGAAATGATAGAACTGAAAAATCCTGAATAGGAATCACCTTAGAGATTAGAAAGGATAGCTCTGT................................7317.007.00-------7.00-------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................AAAGAATGTGGAAATGATAGAACTGAAAA.............................................................................2916.006.002.00--4.00-----------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................AAAGAATGTGGAAATGATAGAACTGAAA..............................................................................2815.005.002.00--1.00-1.00-------------1.00-------------------------------------------------------------------------------------------------------------
.................................................................................................................................................AAGAATGTGGAAATGATAGAACTGA................................................................................2515.005.00--------4.00-1.00----------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................CCTCTATGATTAAAGAATGTGGAAATGATAG......................................................................................3114.004.00-----1.00------------------------1.00--------------------1.00------------------------------------------------------------1.00----------------
......................................................................................................................................CTCTATGATTAAAGAATGTGGAAATGAT........................................................................................2814.004.001.00------------------------------------------------1.00------------------------------1.00--------------1.00---------------------------------
.....ACTATCGGATGTGCACTCTCA................................................................................................................................................................................................................................2113.003.00-------------1.00---------1.00-------------------------------------------------------------------------1.00-------------------------------
................................................................................................TATCCTGGGGTATTTTAAGCCTTGTTT...............................................................................................................................2713.003.00-----------3.00---------------------------------------------------------------------------------------------------------------------
.....ACTATCGGATGTGCACT....................................................................................................................................................................................................................................1713.003.00-----1.00---------------1.00----------------------------------------1.00------------------------------------------------------------------
.................................................................................................................................................AAGAATGTGGAAATGATAGAACTG.................................................................................2413.003.00---------1.002.00----------------------------------------------------------------------------------------------------------------------
......CTATCGGATGTGCACTCTCATT..............................................................................................................................................................................................................................2213.003.00------------------------------1.00---------------------------------------1.00--------1.00-------------------------------------------------
.....................................................................................................................................CCTCTATGATTAAAGAATGTGGAAATG..........................................................................................2712.002.001.00---------1.00----------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................CCTCTATGATTAAAGAATGTGGAAATGATAGA.....................................................................................3212.002.00--------1.00------------------------------------------1.00-----------------------------------------------------------------------------
........................................................................................................................................................TGGAAATGATAGAACACTG...............................................................................192.000.00-------------------------------------------------------2.00-------------------------------------------------------------------------
...GGACTATCGGATGTGCACT....................................................................................................................................................................................................................................1912.002.00--------------------1.00--------1.00---------------------------------------------------------------------------------------------------
.....ACTATCGGATGTGCACTCT..................................................................................................................................................................................................................................1912.002.00-------------------------------------------2.00-------------------------------------------------------------------------------------
..................................................GTGAGATATTTCTAGGGA......................................................................................................................................................................................182.000.00------2.00--------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................CCTCTATGATTAAAGAATGTGGAAATGAT........................................................................................2912.002.00-1.00-------------------------------------------------------------------------------------------1.00-----------------------------------
........ATCGGATGTGCACTCTC.................................................................................................................................................................................................................................1712.002.00---------------1.00------1.00----------------------------------------------------------------------------------------------------------
...GGACTATCGGATGTGCACTCTCA................................................................................................................................................................................................................................2312.002.00---------------2.00-----------------------------------------------------------------------------------------------------------------
.....................................................................................................................TTGTTTGACATGGATTCCTCTAAG.............................................................................................................242.000.00--------------------------------2.00------------------------------------------------------------------------------------------------
..................................TTTGATGAACATGATGGTC.....................................................................................................................................................................................................192.000.00------1.00---------------------------------------------------------------------------------------------------------------1.00----------
............................................................................................................................................GATTAAAGAATGTGGAAATGATA.......................................................................................2312.002.00--------------------2.00------------------------------------------------------------------------------------------------------------
...........................................CATGATGGTGAGATATTTCTAGGAG......................................................................................................................................................................................2511.001.00--------------------------------------------------1.00------------------------------------------------------------------------------
..GGGACTATCGGATGTGCA......................................................................................................................................................................................................................................1811.001.00------------------------------------------------1.00--------------------------------------------------------------------------------
.TGGGACTATCGGATGTGGA......................................................................................................................................................................................................................................191.000.00-----------------------------------------------------------------------------------------------------------------1.00---------------
.....................................................................................................................................CCTCTATGATTAAAGAATGTGGAAATGATC.......................................................................................3011.002.00------------------------------------------------------------------------------------------------------------1.00--------------------
.....ACTATCGGATGTGCACTCTCATTG.............................................................................................................................................................................................................................2411.001.00------------------1.00--------------------------------------------------------------------------------------------------------------
.....ACTATCGGATGTGCACTCTCATTC.............................................................................................................................................................................................................................2411.0036.00------1.00--------------------------------------------------------------------------------------------------------------------------
....GACTATCGGATGTGCACTCTCATT..............................................................................................................................................................................................................................2411.001.00-----------------------------------------------1.00---------------------------------------------------------------------------------
................................................................................................................................................AAAGAATGTGGAAATGATA.......................................................................................1911.001.00-----------------------------------------------------------------------------------------------------------1.00---------------------
...........GGATGTGCACTCTCATT..............................................................................................................................................................................................................................1711.001.00------------------------------------------------------------------------------------------1.00--------------------------------------
.......................................................................................................................................TCTATGATTAAAGAATGTGGAAATGATA.......................................................................................2811.001.00---------------------------------------------------------------------------------------------------------1.00-----------------------
.....ACTATCGGATGTGCACTCTCATTGA............................................................................................................................................................................................................................2511.001.00-------------------------------------------------------------------------------------------------------------------------1.00-------
...GGACTATCGGATGTGCACTCTC.................................................................................................................................................................................................................................2211.001.00-----------------------------------1.00---------------------------------------------------------------------------------------------
............................................................................................................................................................AATGATAGAACTGAACT.............................................................................171.000.00-----------------------------------1.00---------------------------------------------------------------------------------------------
....GACTATCGGATGTGCACTCTCATTT.............................................................................................................................................................................................................................2511.001.00---1.00-----------------------------------------------------------------------------------------------------------------------------
.....ACTATCGGATGTGCACTCTCCA...............................................................................................................................................................................................................................221.000.00------------------------------------------------------------------------------------------------------1.00--------------------------
.................................................................................................................................GATTCCTCTATGATTAAAGAAT...................................................................................................2211.001.00----------------------1.00----------------------------------------------------------------------------------------------------------
......................................................................................................................................CTCTATGATTAAAGAATGTGGAAATGATAG......................................................................................3011.001.00-1.00-------------------------------------------------------------------------------------------------------------------------------
..GGGACTATCGGATGTGGAA.....................................................................................................................................................................................................................................191.000.00--------------------1.00------------------------------------------------------------------------------------------------------------
.....ACTATCGGATGTGCACTCTCATTGT............................................................................................................................................................................................................................2511.001.00---------------------------------------------------------------1.00-----------------------------------------------------------------
.TGGGACTATCGGATGTGCA......................................................................................................................................................................................................................................1911.001.00------------------------------------------------1.00--------------------------------------------------------------------------------
.................................................................................................................................................AAGAATGTGGAAATGATAGAACTGCAAA.............................................................................2811.003.00-------------------1.00-------------------------------------------------------------------------------------------------------------
.........TCGGATGTGCACTCTCATTGAC...........................................................................................................................................................................................................................2211.001.00----------------------------------------1.00----------------------------------------------------------------------------------------
.....ACTATCGGATGTGCACTCTCATTGTT...........................................................................................................................................................................................................................2611.001.00------1.00--------------------------------------------------------------------------------------------------------------------------
..............................CAAGTTTGATGAACATGAT.........................................................................................................................................................................................................1911.001.00---------------------------------------------------------------------------------1.00-----------------------------------------------
.TGGGACTATCGGATGTGCAC.....................................................................................................................................................................................................................................2011.001.00------------------------------------------------------------------1.00--------------------------------------------------------------
......................................................................................................................................CTCTATGATTAAAGAATGTGGAAATG..........................................................................................2611.001.00----------1.00----------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................TTAAAGAATGTGGAAATGAT........................................................................................2011.001.00----------------------------------1.00----------------------------------------------------------------------------------------------
.....ACTATCGGATGTGCACTC...................................................................................................................................................................................................................................1811.001.00--------------------------------------------------------------------1.00------------------------------------------------------------
..GGGACTATCGGATGTGCACT....................................................................................................................................................................................................................................2011.001.00-----------------------------------------------------------------------------------------------------------------------1.00---------
..........................TTGACAAGTTTGATGAACATGATGGTGAGAT.................................................................................................................................................................................................3111.001.00--------------------------------------------1.00------------------------------------------------------------------------------------
.....................................................................................................................................CCTCTATGATTAAAGAATGTGGAAATGATAGGA....................................................................................3311.004.00---------------------------------------------------------------------------------------------------------------1.00-----------------
...........................................................................................................................................................................................................AAAGGATAGCTCTGTACA.............................181.000.00--------------------------------------------------------------------------------------------------------------------1.00------------
.................................................................................................................................................AAGAATGTGGAAATGATAGAACTGAAAAATCCTGAATAGGAATCACCTTAGAGATTAG...............................................5811.001.00----------------------------------------------------------1.00----------------------------------------------------------------------
...............................AAGTTTGATGAACATGATGT.......................................................................................................................................................................................................201.000.00-----------------------------------------------------------------1.00---------------------------------------------------------------
.....................................................................................................................................CCTCTATGATTAAAGAATGTGGAAATTATA.......................................................................................3011.001.00------------------------------------------------------------------------------------------------1.00--------------------------------
.....................................................................................................................................CCTCTATGATTAAAGAATGTGGAAAT...........................................................................................2611.001.00-----------------------------------------------------------1.00---------------------------------------------------------------------
........ATCGGATGTGCACTCTCA................................................................................................................................................................................................................................1811.001.00-----------------------------1.00---------------------------------------------------------------------------------------------------
...GGACTATCGGATGTGCACTCTCATTGA............................................................................................................................................................................................................................2711.001.00---------------1.00-----------------------------------------------------------------------------------------------------------------
............................GACAAGTTTGATGAACATGATGG.......................................................................................................................................................................................................2311.001.00-------------------------------------------------------------------1.00-------------------------------------------------------------
.....................................................................................................................................CCTCTATGATTAAAGAATGT.................................................................................................2011.001.00-1.00-------------------------------------------------------------------------------------------------------------------------------
.....ACTATCGGATGTGCACTCTCC................................................................................................................................................................................................................................211.000.00-----------------------------------------------------------------------1.00---------------------------------------------------------
....GACTATCGGATGTGCACTCTCTTTG.............................................................................................................................................................................................................................251.000.00---1.00-----------------------------------------------------------------------------------------------------------------------------
.....ACTATCGGATGTGCACTCTCATTA.............................................................................................................................................................................................................................2411.0036.00---------------------------------------------------------------------------------------------------------------------------1.00-----
.........................................................................................................................................TATGATTAAAGAATGTGGAAATGATAGA.....................................................................................2811.001.00----------------------------------------------------------------------------1.00----------------------------------------------------
......................CTCATTGACAAGTTTGATG.................................................................................................................................................................................................................1920.500.50-------------------------------------------------------------------------------------------------------------------------------0.50-
.........................ATTGACAAGTTTGATGAACA.............................................................................................................................................................................................................2020.500.50------------------------------------------------------------------------------------------------------------------------------0.50--
.....................................................................................................................................................ATGTGGAAATGATAGA.....................................................................................1680.120.12--------------------------------------------------------------------------------------------------------------------------------0.12

Antisense strand
ATGGGACTATCGGATGTGCACTCTCATTGACAAGTTTGATGAACATGATGGTGAGATATTTCTAGGAGGAAGTTAAAGGAGTATAAGTATTTATAATATCCTGGGGTATTTTAAGCCTTGTTTGACATGGATTCCTCTATGATTAAAGAATGTGGAAATGATAGAACTGAAAAATCCTGAATAGGAATCACCTTAGAGATTAGAAAGGATAGCTCTGTCTAACATACATTGCCTGCCTTCTCCACCAGGT
...................................................(((((((.((((((((....((((...(((((....))))).)))).))))))))))))))).((.((.(((((((((((....)))))).))))).)).)).................................................................................................
..................................................51............................................................................................................161.......................................................................................
SizePerfect hitTotal NormPerfect NormDRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR189782DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR207117(GSM721079)
Whole cell RNA. (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR037938(GSM510476)
293Red. (cell line)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR553575(SRX182781)
source: Kidney. (Kidney)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR029124(GSM416753)
HeLa. (hela)		SRR037935(GSM510473)
293cand3. (cell line)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR189787SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		GSM359205(GSM359205)
HepG2_nucl_up. (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029125(GSM416754)
U2OS. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR037936(GSM510474)
293cand1. (cell line)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM359204(GSM359204)
HepG2_nucl_low. (cell line)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		GSM359191(GSM359191)
HepG2_3pM_5. (cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		GSM359203(GSM359203)
hepg2_untreated_b. (cell line)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		GSM359190(GSM359190)
HepG2_3pM_4. (cell line)		DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)		GSM359173(GSM359173)
hela_10_1. (hela)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577580(Rovira)
total RNA. (breast)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM532876(GSM532876)
G547T. (cervix)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR040016(GSM532901)
G645N. (cervix)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		GSM359192(GSM359192)
HepG2_3pM_6. (cell line)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191556(GSM715666)
45genomic small RNA (size selected RNA from t. (breast)		SRR040036(GSM532921)
G243N. (cervix)		GSM359207(GSM359207)
HepG2_tot_up. (cell line)		SRR191408(GSM715518)
88genomic small RNA (size selected RNA from t. (breast)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR189785SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)		GSM359193(GSM359193)
HepG2_3pM_7. (cell line)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR038858(GSM458541)
MEL202. (cell line)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR040039(GSM532924)
G531T. (cervix)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR040025(GSM532910)
G613T. (cervix)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR038854(GSM458537)
MM653. (cell line)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		SRR191617(GSM715727)
104genomic small RNA (size selected RNA from . (breast)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR040038(GSM532923)
G531N. (cervix)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		GSM359206(GSM359206)
HepG2_tot_low. (cell line)		SRR038860(GSM458543)
MM426. (cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		TAX577589(Rovira)
total RNA. (breast)		TAX577744(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		GSM359189(GSM359189)
HepG2_2pm_3. (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR191591(GSM715701)
53genomic small RNA (size selected RNA from t. (breast)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
...............................................................................................................................TGGATTCCTCTATGATCGT........................................................................................................ 199.000.00----8.00--------------------------------------------------------1.00-------------------------------------------------------------------
............................................................................................................................ATCATAGAGGAATCCATGT........................................................................................................... 1914.004.00----4.00----------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................ATCATAGAGGAATCCAT........................................................................................................... 1713.003.00----------------3.00----------------------------------------------------------------------------------------------------------------
................................................................................................TATCCTGGGGTATTTTAAAGCG.................................................................................................................................... 221.000.00---------------------------1.00-----------------------------------------------------------------------------------------------------
............................................................................................................................ACATGGATTCCTCTATGATT.......................................................................................................... 201.000.00------------------------1.00--------------------------------------------------------------------------------------------------------
................................................................................................TATCCTGGGGTATTTTAAAGT..................................................................................................................................... 211.000.00---------------------------1.00-----------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................TTGCCTGCCTTCTCCACAT... 191.000.00-----------------------------------------------------------------------------------------1.00---------------------------------------
..........................................................................AAAGGAGTATAAGTATCTCG............................................................................................................................................................ 201.000.00-----------------------------------------------------------------------------------1.00---------------------------------------------
.............................................................................................................................ATCATAGAGGAATCCATG........................................................................................................... 1811.001.00----1.00----------------------------------------------------------------------------------------------------------------------------
.............................................TGATGGTGAGATATTACC........................................................................................................................................................................................... 181.000.00-------------------------------------------------------------------------------------------1.00-------------------------------------
...............................................................................................................................TGGATTCCTCTATGATCG......................................................................................................... 181.000.00----1.00----------------------------------------------------------------------------------------------------------------------------
................................................................................................TATCCTGGGGTATTTTAAGGCC.................................................................................................................................... 221.000.00---------------------------1.00-----------------------------------------------------------------------------------------------------
............................................................................................................................ATAGAGGAATCCATGT.............................................................................................................. 1640.250.25----0.25----------------------------------------------------------------------------------------------------------------------------