ID: uc009wti.2_intron_30_0_chr1_160309773_r
GENE: (2)
chr1:160309723-160310020-


(4)
AGO2.ip 		(6)
B-CELL 		(2)
BRAIN 		(10)
BREAST 		(41)
CELL-LINE 		(6)
CERVIX 		(3)
FIBROBLAST 		(7)
HEART 		(8)
HELA 		(1)
KIDNEY 		(5)
LIVER 		(2)
OTHER 		(2)
RRP40.ip 		(37)
SKIN 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
ATGGGACTATCGGATGTGCACTCTCATTGACAAGTTTGATGAACATGATGGTGAGATATTTCTAGGAGGAAGTTAAAGGAGTATAAGTATTTATAATATCCTGGGGTATTTTAAGCCTTGTTTGACATGGATTCCTCTATGATTAAAGAATGTGGAAATGATAGAACTGAAAAATCCTGAATAGGAATCACCTTAGAGATTAGAAAGGATAGCTCTGTCTAACATACATTGCCTGCCTTCTCCACCAGGTCCAGTGCGAGGCATTGACTTCCATAAGCAGCAGCCACTGTTCGTCTCT
...................................................(((((((.((((((((....((((...(((((....))))).)))).))))))))))))))).((.((.(((((((((((....)))))).))))).)).)).................................................................................................................................................
..................................................51............................................................................................................161.......................................................................................................................................
SizePerfect hitTotal NormPerfect NormDRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR189782DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207117(GSM721079)
Whole cell RNA. (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR037938(GSM510476)
293Red. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR553575(SRX182781)
source: Kidney. (Kidney)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR029124(GSM416753)
HeLa. (hela)		SRR037935(GSM510473)
293cand3. (cell line)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR189787SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		GSM359205(GSM359205)
HepG2_nucl_up. (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029125(GSM416754)
U2OS. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR037936(GSM510474)
293cand1. (cell line)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM359204(GSM359204)
HepG2_nucl_low. (cell line)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		GSM359191(GSM359191)
HepG2_3pM_5. (cell line)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		GSM359203(GSM359203)
hepg2_untreated_b. (cell line)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		GSM359190(GSM359190)
HepG2_3pM_4. (cell line)		GSM359189(GSM359189)
HepG2_2pm_3. (cell line)		DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		GSM359173(GSM359173)
hela_10_1. (hela)		SRR189784SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		TAX577580(Rovira)
total RNA. (breast)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM532876(GSM532876)
G547T. (cervix)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR040016(GSM532901)
G645N. (cervix)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		GSM359192(GSM359192)
HepG2_3pM_6. (cell line)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191556(GSM715666)
45genomic small RNA (size selected RNA from t. (breast)		SRR040036(GSM532921)
G243N. (cervix)		GSM359207(GSM359207)
HepG2_tot_up. (cell line)		SRR191408(GSM715518)
88genomic small RNA (size selected RNA from t. (breast)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR189785SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)		GSM359193(GSM359193)
HepG2_3pM_7. (cell line)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR038858(GSM458541)
MEL202. (cell line)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR040039(GSM532924)
G531T. (cervix)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR040025(GSM532910)
G613T. (cervix)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR038854(GSM458537)
MM653. (cell line)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		SRR191617(GSM715727)
104genomic small RNA (size selected RNA from . (breast)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR040038(GSM532923)
G531N. (cervix)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		GSM359206(GSM359206)
HepG2_tot_low. (cell line)		SRR038860(GSM458543)
MM426. (cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		TAX577589(Rovira)
total RNA. (breast)		TAX577744(Rovira)
total RNA. (breast)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR038856(GSM458539)
D11. (cell line)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR191591(GSM715701)
53genomic small RNA (size selected RNA from t. (breast)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.....................................................................................................................................CCTCTATGATTAAAGAATGTGGAAATGATA.......................................................................................................................................30181.0081.0035.0017.00---2.00----2.00---1.00----1.00----2.003.001.00-------2.00--2.00--1.00-1.00------1.00-----1.00--2.001.001.001.00---------------1.00-----1.00---------1.00------------1.00--------------------------
......................................................................................................................................CTCTATGATTAAAGAATGTGGAAATGATA.......................................................................................................................................29170.0070.0032.0018.004.002.00----1.00---2.00------------------3.00-------------2.00--------2.00----1.00------------------------------------------------1.001.00-1.00---------------------
.................................................................................................................................................AAGAATGTGGAAATGATAGAACTGAAA..............................................................................................................................27146.0046.0010.005.00-10.00--2.00---1.00--5.002.00-1.00----------------1.00-----1.00--1.00------------1.00-----------1.00--------------1.00--1.00---------1.00------------------1.00-------------1.00----
.....ACTATCGGATGTGCACTCTCATT..............................................................................................................................................................................................................................................................................23136.0036.00----1.00-1.00-2.00-----2.00--1.003.00--3.00-2.00--1.00-3.00---1.002.00--1.00----1.00--1.00-----------2.00------------------------1.00----1.00-----1.00---1.00---1.00-1.00----1.00---------1.00---1.00-----------
......................................................................................................................................CTCTATGATTAAAGAATGTGGAA.............................................................................................................................................23125.0025.00--25.00----------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................AAGAATGTGGAAATGATAGAACTGAAAA.............................................................................................................................28120.0020.002.003.00-6.00-3.00----1.00--------1.00-------------------1.00------------------------------------------------------1.00---------------------------1.00---1.00------
.....ACTATCGGATGTGCACTCTCAT...............................................................................................................................................................................................................................................................................22117.0017.00--------1.00--------3.00----1.00---1.00---1.00-----1.00-2.00--1.00----------1.00-------------------1.00-------1.00---------1.00---------------------1.00----------------1.00---
.................................................................................................................................................AAGAATGTGGAAATGATAGAACTGAAAAATCCTGAATAGGAATCACCTTAGAGATTAGAAAGGATAGCTCTGT................................................................................7317.007.00-------7.00-----------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................AAAGAATGTGGAAATGATAGAACTGAAAA.............................................................................................................................2916.006.002.00--4.00---------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................AAAGAATGTGGAAATGATAGAACTGAAA..............................................................................................................................2815.005.002.00--1.00-1.00-------------1.00-----------------------------------------------------------------------------------------------------------------
.................................................................................................................................................AAGAATGTGGAAATGATAGAACTGA................................................................................................................................2515.005.00---------4.00-1.00-------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................CCTCTATGATTAAAGAATGTGGAAATGATAG......................................................................................................................................3114.004.00-----1.00------------------------1.00----------------------1.00------------------------------------------------------------------1.00------------
......................................................................................................................................CTCTATGATTAAAGAATGTGGAAATGAT........................................................................................................................................2814.004.001.00------------------------------------------------1.00--------------------------------------1.00--------------1.00-----------------------------
.....ACTATCGGATGTGCACTCTCA................................................................................................................................................................................................................................................................................2113.003.00--------1.00--------------1.00---------------------------------------------------------------------------------1.00---------------------------
................................................................................................TATCCTGGGGTATTTTAAGCCTTGTTT...............................................................................................................................................................................2713.003.00------------3.00------------------------------------------------------------------------------------------------------------------------
.....ACTATCGGATGTGCACT....................................................................................................................................................................................................................................................................................1713.003.00-----1.00---------------1.00------------------------------------------------1.00--------------------------------------------------------------
.................................................................................................................................................AAGAATGTGGAAATGATAGAACTG.................................................................................................................................2413.003.00----------1.002.00-------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................AGGCATTGACTTCCACTAG.....................193.000.00----3.00--------------------------------------------------------------------------------------------------------------------------------
......CTATCGGATGTGCACTCTCATT..............................................................................................................................................................................................................................................................................2213.003.00------------------------------1.00-----------------------------------------------1.00--------1.00---------------------------------------------
.....................................................................................................................................CCTCTATGATTAAAGAATGTGGAAATG..........................................................................................................................................2712.002.001.00----------1.00-------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................CCTCTATGATTAAAGAATGTGGAAATGATAGA.....................................................................................................................................3212.002.00---------1.00-------------------------------------------1.00-------------------------------------------------------------------------------
........................................................................................................................................................TGGAAATGATAGAACACTG...............................................................................................................................192.000.00---------------------------------------------------------2.00---------------------------------------------------------------------------
...GGACTATCGGATGTGCACT....................................................................................................................................................................................................................................................................................1912.002.00--------------------1.00--------1.00-------------------------------------------------------------------------------------------------------
.....ACTATCGGATGTGCACTCT..................................................................................................................................................................................................................................................................................1912.002.00-------------------------------------------2.00-----------------------------------------------------------------------------------------
..................................................GTGAGATATTTCTAGGGA......................................................................................................................................................................................................................................182.000.00------2.00------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................CCTCTATGATTAAAGAATGTGGAAATGAT........................................................................................................................................2912.002.00-1.00---------------------------------------------------------------------------------------------------1.00-------------------------------
........ATCGGATGTGCACTCTC.................................................................................................................................................................................................................................................................................1712.002.00---------------1.00------1.00--------------------------------------------------------------------------------------------------------------
...GGACTATCGGATGTGCACTCTCA................................................................................................................................................................................................................................................................................2312.002.00---------------2.00---------------------------------------------------------------------------------------------------------------------
.....................................................................................................................TTGTTTGACATGGATTCCTCTAAG.............................................................................................................................................................242.000.00--------------------------------2.00----------------------------------------------------------------------------------------------------
..................................TTTGATGAACATGATGGTC.....................................................................................................................................................................................................................................................192.000.00------1.00----------------------------------------------------------------------------------------------------------------------1.00-------
............................................................................................................................................GATTAAAGAATGTGGAAATGATA.......................................................................................................................................2312.002.00--------------------2.00----------------------------------------------------------------------------------------------------------------
...........................................CATGATGGTGAGATATTTCTAGGAG......................................................................................................................................................................................................................................2511.001.00----------------------------------------------------1.00--------------------------------------------------------------------------------
..GGGACTATCGGATGTGCA......................................................................................................................................................................................................................................................................................1811.001.00------------------------------------------------1.00------------------------------------------------------------------------------------
.TGGGACTATCGGATGTGGA......................................................................................................................................................................................................................................................................................191.000.00--------------------------------------------------------------1.00----------------------------------------------------------------------
.....................................................................................................................................CCTCTATGATTAAAGAATGTGGAAATGATC.......................................................................................................................................3011.002.00--------------------------------------------------------------------------------------------------------------------1.00----------------
.....ACTATCGGATGTGCACTCTCATTG.............................................................................................................................................................................................................................................................................2411.001.00------------------1.00------------------------------------------------------------------------------------------------------------------
.....ACTATCGGATGTGCACTCTCATTC.............................................................................................................................................................................................................................................................................2411.0036.00------1.00------------------------------------------------------------------------------------------------------------------------------
....GACTATCGGATGTGCACTCTCATT..............................................................................................................................................................................................................................................................................2411.001.00-----------------------------------------------1.00-------------------------------------------------------------------------------------
................................................................................................................................................AAAGAATGTGGAAATGATA.......................................................................................................................................1911.001.00-------------------------------------------------------------------------------------------------------------------1.00-----------------
...........GGATGTGCACTCTCATT..............................................................................................................................................................................................................................................................................1711.001.00--------------------------------------------------------------------------------------------------1.00----------------------------------
.......................................................................................................................................TCTATGATTAAAGAATGTGGAAATGATA.......................................................................................................................................2811.001.00-----------------------------------------------------------------------------------------------------------------1.00-------------------
.....ACTATCGGATGTGCACTCTCATTGA............................................................................................................................................................................................................................................................................2511.001.00---------------------------------------------------1.00---------------------------------------------------------------------------------
...GGACTATCGGATGTGCACTCTC.................................................................................................................................................................................................................................................................................2211.001.00-----------------------------------1.00-------------------------------------------------------------------------------------------------
............................................................................................................................................................AATGATAGAACTGAACT.............................................................................................................................171.000.00-----------------------------------1.00-------------------------------------------------------------------------------------------------
....GACTATCGGATGTGCACTCTCATTT.............................................................................................................................................................................................................................................................................2511.001.00---1.00---------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................CCAGTGCGAGGCATTGAC..............................1811.001.00----------------------------------------------------------------1.00--------------------------------------------------------------------
.....ACTATCGGATGTGCACTCTCCA...............................................................................................................................................................................................................................................................................221.000.00--------------------------------------------------------------------------------------------------------------1.00----------------------
.................................................................................................................................GATTCCTCTATGATTAAAGAAT...................................................................................................................................................2211.001.00----------------------1.00--------------------------------------------------------------------------------------------------------------
......................................................................................................................................CTCTATGATTAAAGAATGTGGAAATGATAG......................................................................................................................................3011.001.00-1.00-----------------------------------------------------------------------------------------------------------------------------------
..GGGACTATCGGATGTGGAA.....................................................................................................................................................................................................................................................................................191.000.00--------------------1.00----------------------------------------------------------------------------------------------------------------
.....ACTATCGGATGTGCACTCTCATTGT............................................................................................................................................................................................................................................................................2511.001.00-----------------------------------------------------------------------1.00-------------------------------------------------------------
.TGGGACTATCGGATGTGCA......................................................................................................................................................................................................................................................................................1911.001.00------------------------------------------------1.00------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................ATAAGCAGCAGCCACGTT........181.000.00--------1.00----------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................AAGAATGTGGAAATGATAGAACTGCAAA.............................................................................................................................2811.003.00-------------------1.00-----------------------------------------------------------------------------------------------------------------
.........TCGGATGTGCACTCTCATTGAC...........................................................................................................................................................................................................................................................................2211.001.00----------------------------------------1.00--------------------------------------------------------------------------------------------
.....ACTATCGGATGTGCACTCTCATTGTT...........................................................................................................................................................................................................................................................................2611.001.00------1.00------------------------------------------------------------------------------------------------------------------------------
..............................CAAGTTTGATGAACATGAT.........................................................................................................................................................................................................................................................1911.001.00-----------------------------------------------------------------------------------------1.00-------------------------------------------
.TGGGACTATCGGATGTGCAC.....................................................................................................................................................................................................................................................................................2011.001.00--------------------------------------------------------------------------1.00----------------------------------------------------------
......................................................................................................................................CTCTATGATTAAAGAATGTGGAAATG..........................................................................................................................................2611.001.00-----------1.00-------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................TTAAAGAATGTGGAAATGAT........................................................................................................................................2011.001.00----------------------------------1.00--------------------------------------------------------------------------------------------------
.....ACTATCGGATGTGCACTC...................................................................................................................................................................................................................................................................................1811.001.00----------------------------------------------------------------------------1.00--------------------------------------------------------
..............................................................................................................................................................................................................................................................TGCGAGGCATTGACTCTAT.........................191.000.00------------------------------------------------------------------1.00------------------------------------------------------------------
..GGGACTATCGGATGTGCACT....................................................................................................................................................................................................................................................................................2011.001.00--------------------------------------------------1.00----------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................CATAAGCAGCAGCCACTGTTCGTCT..2511.001.00------------------------------------------------------------1.00------------------------------------------------------------------------
..........................TTGACAAGTTTGATGAACATGATGGTGAGAT.................................................................................................................................................................................................................................................3111.001.00--------------------------------------------1.00----------------------------------------------------------------------------------------
.....................................................................................................................................CCTCTATGATTAAAGAATGTGGAAATGATAGGA....................................................................................................................................3311.004.00-----------------------------------------------------------------------------------------------------------------------1.00-------------
...........................................................................................................................................................................................................AAAGGATAGCTCTGTACA.............................................................................181.000.00---------------------------------------------------------------------------------------------------------------------------1.00---------
.................................................................................................................................................AAGAATGTGGAAATGATAGAACTGAAAAATCCTGAATAGGAATCACCTTAGAGATTAG...............................................................................................5811.001.00-------------------------------------------------------------1.00-----------------------------------------------------------------------
...............................AAGTTTGATGAACATGATGT.......................................................................................................................................................................................................................................................201.000.00-------------------------------------------------------------------------1.00-----------------------------------------------------------
.....................................................................................................................................CCTCTATGATTAAAGAATGTGGAAATTATA.......................................................................................................................................3011.001.00--------------------------------------------------------------------------------------------------------1.00----------------------------
.....................................................................................................................................CCTCTATGATTAAAGAATGTGGAAAT...........................................................................................................................................2611.001.00-----------------------------------------------------------------1.00-------------------------------------------------------------------
..................................................................................................................................................................................................................................................................AGGCATTGACTTCCATAAGCAGCA................2411.001.00---------------------------------------------------1.00---------------------------------------------------------------------------------
........ATCGGATGTGCACTCTCA................................................................................................................................................................................................................................................................................1811.001.00-----------------------------1.00-------------------------------------------------------------------------------------------------------
...GGACTATCGGATGTGCACTCTCATTGA............................................................................................................................................................................................................................................................................2711.001.00---------------1.00---------------------------------------------------------------------------------------------------------------------
............................GACAAGTTTGATGAACATGATGG.......................................................................................................................................................................................................................................................2311.001.00---------------------------------------------------------------------------1.00---------------------------------------------------------
.....................................................................................................................................CCTCTATGATTAAAGAATGT.................................................................................................................................................2011.001.00-1.00-----------------------------------------------------------------------------------------------------------------------------------
.....ACTATCGGATGTGCACTCTCC................................................................................................................................................................................................................................................................................211.000.00-------------------------------------------------------------------------------1.00-----------------------------------------------------
....GACTATCGGATGTGCACTCTCTTTG.............................................................................................................................................................................................................................................................................251.000.00---1.00---------------------------------------------------------------------------------------------------------------------------------
.....ACTATCGGATGTGCACTCTCATTA.............................................................................................................................................................................................................................................................................2411.0036.00---------------------------------------------------------------1.00---------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................AGCAGCAGCCACTGTTCGTCTCT2311.001.00--------------------------------------------------------------------1.00----------------------------------------------------------------
.........................................................................................................................................TATGATTAAAGAATGTGGAAATGATAGA.....................................................................................................................................2811.001.00------------------------------------------------------------------------------------1.00------------------------------------------------
...............................................................................................................................................................................................................................................................................CATAAGCAGCAGCCACTGTT.......2020.500.50--------------------------------------------------------------0.50----------------------------------------------------------------------
......................CTCATTGACAAGTTTGATG.................................................................................................................................................................................................................................................................1920.500.50-----------------------------------------------------------------------------------------------------------------------------------0.50-
...............................................................................................................................................................................................................................................................................CATAAGCAGCAGCCAC...........1620.500.50---------------------------------------------------------------0.50---------------------------------------------------------------------
.........................ATTGACAAGTTTGATGAACA.............................................................................................................................................................................................................................................................2020.500.50----------------------------------------------------------------------------------------------------------------------------------0.50--
.....................................................................................................................................................ATGTGGAAATGATAGA.....................................................................................................................................1680.120.12------------------------------------------------------------------------------------------------------------------------------------0.12

Antisense strand
ATGGGACTATCGGATGTGCACTCTCATTGACAAGTTTGATGAACATGATGGTGAGATATTTCTAGGAGGAAGTTAAAGGAGTATAAGTATTTATAATATCCTGGGGTATTTTAAGCCTTGTTTGACATGGATTCCTCTATGATTAAAGAATGTGGAAATGATAGAACTGAAAAATCCTGAATAGGAATCACCTTAGAGATTAGAAAGGATAGCTCTGTCTAACATACATTGCCTGCCTTCTCCACCAGGTCCAGTGCGAGGCATTGACTTCCATAAGCAGCAGCCACTGTTCGTCTCT
...................................................(((((((.((((((((....((((...(((((....))))).)))).))))))))))))))).((.((.(((((((((((....)))))).))))).)).)).................................................................................................................................................
..................................................51............................................................................................................161.......................................................................................................................................
SizePerfect hitTotal NormPerfect NormDRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR189782DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207117(GSM721079)
Whole cell RNA. (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR037938(GSM510476)
293Red. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR553575(SRX182781)
source: Kidney. (Kidney)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR029124(GSM416753)
HeLa. (hela)		SRR037935(GSM510473)
293cand3. (cell line)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR189787SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		GSM359205(GSM359205)
HepG2_nucl_up. (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029125(GSM416754)
U2OS. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR037936(GSM510474)
293cand1. (cell line)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM359204(GSM359204)
HepG2_nucl_low. (cell line)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		GSM359191(GSM359191)
HepG2_3pM_5. (cell line)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		GSM359203(GSM359203)
hepg2_untreated_b. (cell line)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		GSM359190(GSM359190)
HepG2_3pM_4. (cell line)		GSM359189(GSM359189)
HepG2_2pm_3. (cell line)		DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		GSM359173(GSM359173)
hela_10_1. (hela)		SRR189784SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		TAX577580(Rovira)
total RNA. (breast)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM532876(GSM532876)
G547T. (cervix)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR040016(GSM532901)
G645N. (cervix)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		GSM359192(GSM359192)
HepG2_3pM_6. (cell line)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191556(GSM715666)
45genomic small RNA (size selected RNA from t. (breast)		SRR040036(GSM532921)
G243N. (cervix)		GSM359207(GSM359207)
HepG2_tot_up. (cell line)		SRR191408(GSM715518)
88genomic small RNA (size selected RNA from t. (breast)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR189785SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)		GSM359193(GSM359193)
HepG2_3pM_7. (cell line)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR038858(GSM458541)
MEL202. (cell line)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR040039(GSM532924)
G531T. (cervix)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR040025(GSM532910)
G613T. (cervix)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR038854(GSM458537)
MM653. (cell line)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		SRR191617(GSM715727)
104genomic small RNA (size selected RNA from . (breast)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR040038(GSM532923)
G531N. (cervix)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		GSM359206(GSM359206)
HepG2_tot_low. (cell line)		SRR038860(GSM458543)
MM426. (cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		TAX577589(Rovira)
total RNA. (breast)		TAX577744(Rovira)
total RNA. (breast)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR038856(GSM458539)
D11. (cell line)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR191591(GSM715701)
53genomic small RNA (size selected RNA from t. (breast)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
...............................................................................................................................TGGATTCCTCTATGATCGT........................................................................................................................................................ 199.000.00----8.00----------------------------------------------------------------1.00---------------------------------------------------------------
............................................................................................................................ATCATAGAGGAATCCATGT........................................................................................................................................................... 1914.004.00----4.00--------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................ATCATAGAGGAATCCAT........................................................................................................................................................... 1713.003.00----------------3.00--------------------------------------------------------------------------------------------------------------------
................................................................................................TATCCTGGGGTATTTTAAAGCG.................................................................................................................................................................................... 221.000.00---------------------------1.00---------------------------------------------------------------------------------------------------------
............................................................................................................................ACATGGATTCCTCTATGATT.......................................................................................................................................................... 201.000.00------------------------1.00------------------------------------------------------------------------------------------------------------
................................................................................................TATCCTGGGGTATTTTAAAGT..................................................................................................................................................................................... 211.000.00---------------------------1.00---------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................TTGCCTGCCTTCTCCACAT................................................... 191.000.00-------------------------------------------------------------------------------------------------1.00-----------------------------------
..........................................................................AAAGGAGTATAAGTATCTCG............................................................................................................................................................................................................ 201.000.00-------------------------------------------------------------------------------------------1.00-----------------------------------------
.............................................................................................................................ATCATAGAGGAATCCATG........................................................................................................................................................... 1811.001.00----1.00--------------------------------------------------------------------------------------------------------------------------------
.............................................TGATGGTGAGATATTACC........................................................................................................................................................................................................................................... 181.000.00---------------------------------------------------------------------------------------------------1.00---------------------------------
...............................................................................................................................TGGATTCCTCTATGATCG......................................................................................................................................................... 181.000.00----1.00--------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................ACTGGACCTGGTGGAGAAG........................................... 1911.001.00-------------------------------------------------------------------------------------------------------------------------------1.00-----
................................................................................................TATCCTGGGGTATTTTAAGGCC.................................................................................................................................................................................... 221.000.00---------------------------1.00---------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................CAGCAGCCACTGTTCGGT... 181.000.00--------------------------------------------------1.00----------------------------------------------------------------------------------
............................................................................................................................ATAGAGGAATCCATGT.............................................................................................................................................................. 1640.250.25----0.25--------------------------------------------------------------------------------------------------------------------------------