ID: uc009wtf.2_intron_6_0_chr1_160068308_r
GENE: (1)
chr1:160068258-160068638-


(3)
AGO2.ip 		(6)
B-CELL 		(2)
BRAIN 		(14)
BREAST 		(33)
CELL-LINE 		(10)
CERVIX 		(1)
FIBROBLAST 		(2)
HEART 		(1)
HELA 		(9)
LIVER 		(1)
OTHER 		(2)
RRP40.ip 		(16)
SKIN 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
CGATGCGACTCAAAGGTGAGTTTCGAGGGGCGGGGCGGGGCCGGGGCCAGGTGCGGAGCAAAGGCCGGAGTCTGGCGGGGGTGGGGCAGGCAGGGCCAAGGCTGGGTCCGGGGCGGGGCGGGCCTAGACGGGGCGGTGGAAGGGGCGGTGCCGGGGCGGGCCGGGGCGAGAATGGTTTCAGAACTGCCGAGGGCTGGAGGGAAAGCAGCGGGAGGGGCGGAGGGAGGGGATTCGGCAGCTCCAGTTCAGCTCGCTCGGCGCACCCACGCCTCGCTGCCCCGCTTCCTGCCCTCAACCTGGGCATGCGCCCCCCACCCTTCCGGCCCCCCAGAACCCGCGCCATCCCCCGGAGCCTCCCCAGAGCTGGCCGCGCAGGATGGG
.........................................................................................................((((..(((((.((.(((((...(((.((.((.......)).)).)))....)))))...))..(((....)))....)))))....((((.........)))).....))))...................................................................................................................................................................
......................................................................................................103..............................................................................................................................232...................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		TAX577453(Rovira)
total RNA. (breast)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR040007(GSM532892)
G601T. (cervix)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033731(GSM497076)
h929 Cell line (h929). (B cell)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR040012(GSM532897)
G648N. (cervix)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR038857(GSM458540)
D20. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR191409(GSM715519)
19genomic small RNA (size selected RNA from t. (breast)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		TAX577580(Rovira)
total RNA. (breast)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040029(GSM532914)
G026T. (cervix)		SRR189787SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)		SRR189783GSM339995(GSM339995)
hues6NP. (cell line)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR191519(GSM715629)
86genomic small RNA (size selected RNA from t. (breast)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037943(GSM510481)
293DcrTN. (cell line)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040009(GSM532894)
G727T. (cervix)		GSM532874(GSM532874)
G699T. (cervix)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR189785SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		TAX577739(Rovira)
total RNA. (breast)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM339994(GSM339994)
hues6. (cell line)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577590(Rovira)
total RNA. (breast)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		TAX577579(Rovira)
total RNA. (breast)		SRR015365(GSM380330)
Memory B cells (MM139). (B cell)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		GSM532879(GSM532879)
G659N. (cervix)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038862(GSM458545)
MM472. (cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR040035(GSM532920)
G001T. (cervix)		SRR191473(GSM715583)
121genomic small RNA (size selected RNA from . (breast)		SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		TAX577743(Rovira)
total RNA. (breast)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR040015(GSM532900)
G623T. (cervix)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR038860(GSM458543)
MM426. (cell line)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR038863(GSM458546)
MM603. (cell line)		SRR040028(GSM532913)
G026N. (cervix)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191600(GSM715710)
90genomic small RNA (size selected RNA from t. (breast)		GSM532882(GSM532882)
G696T. (cervix)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR037937(GSM510475)
293cand2. (cell line)
................................................................................................................................................................................................................CGGGAGGGGCGGAGGGAGGG.........................................................................................................................................................2018.008.00------------------2.00---------------------------------1.00------------1.00-1.001.00-1.00---1.00-------------------------
......................TCGAGGGGCGGGGCGGA......................................................................................................................................................................................................................................................................................................................................................176.000.00-----3.00-1.00-----------------------------1.00--------------------------1.00-----------------------------------
...............................................................................................................................................................................................................GCGGGAGGGGCGGAGGGAGGG.........................................................................................................................................................2114.004.00---------2.00-------------1.00------------------------------------1.00---------------------------------------
...........................................................................................................CCGGGGCGGGGCGGGCCCA...............................................................................................................................................................................................................................................................194.000.00------------2.00--------------------------------1.00----------1.00-------------------------------------------
................................................................................................................................................................................................................................................CCAGTTCAGCTCGCTCGGCG.........................................................................................................................2013.003.00----3.00-----------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................CGCCTCGCTGCCCCGCTTC................................................................................................1913.003.00--3.00-------------------------------------------------------------------------------------------------
......................TCGAGGGGCGGGGCGGAC.....................................................................................................................................................................................................................................................................................................................................................183.000.00-------1.00-------------------------------------------------------1.00-----------------1.00------------------
...............................................................................................................................................................................................................GCGGGAGGGGCGGAGGGAGG..........................................................................................................................................................2013.003.00------2.00-----------------1.00---------------------------------------------------------------------------
............................................................................................................................................................CGGGCCGGGGCGAGAA.................................................................................................................................................................................................................1612.002.00--------------2.00-------------------------------------------------------------------------------------
...............................................................................................................................................................................................................GCGGGAGGGGCGGAGGGA............................................................................................................................................................1812.002.00-2.00--------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................CAGAGCTGGCCGCGCAGGATGG.2212.002.002.00---------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................AGAGCTGGCCGCGCAGGATGGG2212.002.002.00---------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................CGGGAGGGGCGGAGGGAGGGG........................................................................................................................................................2112.002.00----------------------1.00------------------------------------------------------------1.00----------------
..............................................................................................................................................................................................................................................CTCCAGTTCAGCTCGCTCGG...........................................................................................................................2012.002.00------------------------------------1.00-------1.00-------------------------------------------------------
................................................................................................................................................................................................................CGGGAGGGGCGGAGGGAG...........................................................................................................................................................1822.002.00-----------------0.50------0.50----------------------------------------------------------------0.500.50---------
...............................................................................................................................................................................................................GCGGGAGGGGCGGAGGGAGGGGAATTT...................................................................................................................................................272.000.00-----------2.00----------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................CGCTTCCTGCCCTCAACCTGG.................................................................................2112.002.00-------------------2.00--------------------------------------------------------------------------------
................................................................................................................................................................................................................................................CCAGTTCAGCTCGCTCGG...........................................................................................................................1812.002.00----------------------------1.00------------------------------------------------1.00----------------------
................................................................................................................................................................................................................CGGGAGGGGCGGAGGGA............................................................................................................................................................1721.501.50-0.50----1.00---------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................AGGGGCGGAGGGAGGGGA.......................................................................................................................................................1841.251.25----------------------0.50----0.25-----------------------------------------------------------------0.25--0.25---
.................................................................................................................................................................................................................GGGAGGGGCGGAGGGAGGGGA.......................................................................................................................................................2111.001.001.00---------------------------------------------------------------------------------------------------
...........................................................................CGGGGGTGGGGCAGGCAGGGCCAAGGC.......................................................................................................................................................................................................................................................................................2711.001.00---------------------------------1.00------------------------------------------------------------------
.............................................................................................................................................................................................................................................................CTCGGCGCACCCACGCCTCGCTGC........................................................................................................2411.001.00----------------------------------------1.00-----------------------------------------------------------
................................................................................................................................................................................................................CGGGAGGGGCGGAGGGAGGGTTT......................................................................................................................................................2311.008.00-------------------------------------------------------1.00--------------------------------------------
......................................................................................................................................................................................................................................TTCGGCAGCTCCAGTTCAGCT..................................................................................................................................2111.001.00---------------------------------------------------------------------1.00------------------------------
...................................................................................................................................................................................................................................GGATTCGGCAGCTCCAGTTCAGCTCGCTCGG...........................................................................................................................3111.001.00-------------------------------1.00--------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................ACCCACGCCTCGCTGCCC......................................................................................................1811.001.00--------------------------1.00-------------------------------------------------------------------------
.............................................................................................................................................................................................AGGGCTGGAGGGAAATT...............................................................................................................................................................................171.000.00--------------------------------------------------------------1.00-------------------------------------
............................................................................................................................TAGACGGGGCGGTGG..................................................................................................................................................................................................................................................1511.001.00-------------1.00--------------------------------------------------------------------------------------
......................................................................................................................................................................................ACTGCCGAGGGCTGGAG......................................................................................................................................................................................1711.001.00------------------------------------------------------------------------------1.00---------------------
..............................................................................................................GGGCGGGGCGGGCCTAGG.............................................................................................................................................................................................................................................................181.000.00--------------------------------------1.00-------------------------------------------------------------
............................................................................................................................................................................................GAGGGCTGGAGGGAAAGCAG.............................................................................................................................................................................2021.001.00--------------------------------------------------------------------------------------0.500.50------------
.................................................................................................................................................................................................................................................CAGTTCAGCTCGCTCGGCG.........................................................................................................................1911.001.00----1.00-----------------------------------------------------------------------------------------------
....................................................................................................................................................TGCCGGGGCGGGCCGTCTG......................................................................................................................................................................................................................191.000.00----------------------------------------------------------------------------------1.00-----------------
.....................................................................................................................................................................................................................................................TCAGCTCGCTCGGCGCACCCAC..................................................................................................................2211.001.00------------------------------------------------------------------1.00---------------------------------
................................................................................................................................................................................................................CGGGAGGGGCGGAGGGAGG..........................................................................................................................................................1911.001.00----------1.00-----------------------------------------------------------------------------------------
........................................................................................................GGTCCGGGGCGGGGCGCC...................................................................................................................................................................................................................................................................181.000.00-------------------------------------------------1.00--------------------------------------------------
....................................................................................................................................................................................................................AGGGGCGGAGGGAGGGGATT.....................................................................................................................................................2011.001.00--------------------1.00-------------------------------------------------------------------------------
......................................GGCCGGGGCCAGGTGCAGA....................................................................................................................................................................................................................................................................................................................................191.000.00--------1.00-------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................GATTCGGCAGCTCCAG.........................................................................................................................................1611.001.00-------------1.00--------------------------------------------------------------------------------------
................................................................................................................................................................................................................CGGGAGGGGCGGAGGGAGGGGA.......................................................................................................................................................2211.001.00----------------------------------------------1.00-----------------------------------------------------
..........................................................................GCGGGGGTGGGGCAGTGG.................................................................................................................................................................................................................................................................................................181.000.00----------------------------------------------------------1.00-----------------------------------------
................................................................................................................................................................................................................CGGGAGGGGCGGAGGTA............................................................................................................................................................171.000.00-1.00--------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................GCGGGAGGGGCGGAGGGAGGGTAA......................................................................................................................................................2411.004.00---------------------------------------------------1.00------------------------------------------------
..................................................................................................................................................................................................................................................AGTTCAGCTCGCTCGGC..........................................................................................................................1711.001.00---------------------------------------------------------------------------1.00------------------------
..................................................................................................................................................................................................TGGAGGGAAAGCAGCCTTT........................................................................................................................................................................191.000.00-------------------------------------------------------------------------1.00--------------------------
...................................................................................................................................................................................................................................................................................................................................................CCATCCCCCGGAGCCTCCCCAGAGC.................2511.001.00-------------------------------------------1.00--------------------------------------------------------
................................................................................................................................................................................................................CGGGAGGGGCGGAGGGAGGGTT.......................................................................................................................................................2211.008.00---------------1.00------------------------------------------------------------------------------------
.................................................................................................................................................................................................................GGGAGGGGCGGAGGGAGGGGATT.....................................................................................................................................................2311.001.00------------------------------------------1.00---------------------------------------------------------
................................................................................................................................................................................................................................................CCAGTTCAGCTCGCTCGGC..........................................................................................................................1911.001.00--------1.00-------------------------------------------------------------------------------------------
................................................................................................................................................................................................................CGGGAGGGGCGGAGGGAGGGGTA......................................................................................................................................................2311.002.00-------------------------------------------------------------------------------------1.00--------------
........................................................................................................................................................................................................................................................GCTCGCTCGGCGCACCCA...................................................................................................................1811.001.00-----------------------------1.00----------------------------------------------------------------------
........................................................................................................................................................................................................................................CGGCAGCTCCAGTTCAGCT..................................................................................................................................1911.001.00------------------------------------------------------------------------------------1.00---------------
................................................................................................................................................................................................................CGGGAGGGGCGGAGGGAGGTTT.......................................................................................................................................................2211.001.00---------------1.00------------------------------------------------------------------------------------
................................................................................................................................................................................................................CGGGAGGGGCGGAGGGAGGGGAT......................................................................................................................................................2311.001.00--------------------------------------------------1.00-------------------------------------------------
................................................................................................................................................................................................................CGGGAGGGGCGGAGGGAGGGAA.......................................................................................................................................................2211.008.00------------------------------------------------------------------------1.00---------------------------
.....................................................................................................................................................................................................................................................................................................................................................................CCAGAGCTGGCCGCGCA.......1711.001.00-1.00--------------------------------------------------------------------------------------------------
...........................GGGCGGGGCGGGGCCGG.................................................................................................................................................................................................................................................................................................................................................1701.001.00-------1.00--------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................ACCTGGGCATGCGCCCCCCA...................................................................2011.001.001.00---------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................AGTTCAGCTCGCTCGGCGCACCCACGCC...............................................................................................................2811.001.00-----------------------------------------------------1.00----------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................TCCCCAGAGCTGGCCGCGCAGGATG..2511.001.001.00---------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................CGGGAGGGGCGGAGGGAGGGGT.......................................................................................................................................................2211.002.00-------------------------------------------------------------1.00--------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................CAGAGCTGGCCGCGCAGGA....1911.001.001.00---------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................GCGGGAGGGGCGGAGGGAGGGGATT.....................................................................................................................................................2511.001.00---------------------------------------------------------1.00------------------------------------------
......................................................................................................................................................CCGGGGCGGGCCGGGT.......................................................................................................................................................................................................................161.000.00-----------------------------------------1.00----------------------------------------------------------
.......................................................................................................................................................................................CTGCCGAGGGCTGGAGGG....................................................................................................................................................................................1811.001.00---------------------1.00------------------------------------------------------------------------------
...............................................................................................................................................................................................................GCGGGAGGGGCGGAGGGAGGGG........................................................................................................................................................2211.001.00-----------------------------------1.00----------------------------------------------------------------
...............................................................................................................................................................................................................................GAGGGGATTCGGCAGCTC............................................................................................................................................1811.001.00-----------------------------------------------1.00----------------------------------------------------
.................................................................................................................................................................................................................................................CAGTTCAGCTCGCTCGGC..........................................................................................................................1811.001.00--------------------------------1.00-------------------------------------------------------------------
.......................CGAGGGGCGGGGCGG.......................................................................................................................................................................................................................................................................................................................................................1501.001.00-------------------------------------------------------------------------------1.00--------------------
....................................................................................................................................................................................................................................................................................CCCCGCTTCCTGCCCTCGCTA....................................................................................211.000.00---------------------------------------1.00------------------------------------------------------------
...............................................................................................................................................................................................................................................TCCAGTTCAGCTCGCTCGGCG.........................................................................................................................2111.001.00------------------------------------------------------1.00---------------------------------------------
..........................................................................................................................................................................................CCGAGGGCTGGAGGGAAA.................................................................................................................................................................................1811.001.00---------------------------1.00------------------------------------------------------------------------
..........................................................................................................................................................................................CCGAGGGCTGGAGGGAAC.................................................................................................................................................................................181.000.00-------------------------1.00--------------------------------------------------------------------------
.........................................................................................................................................................................................................................CGGAGGGAGGGGATTCGGCAGCTCCA..........................................................................................................................................2611.001.00--------------------1.00-------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................AGTTCAGCTCGCTCGGCGC........................................................................................................................1911.001.001.00---------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................AGGGCTGGAGGGAAAGCA..............................................................................................................................................................................1840.750.75--------0.250.25------------------------------------------------------------------------------------0.25-----
...............................................................................................................................................................................................................GCGGGAGGGGCGGAGGG.............................................................................................................................................................1720.500.50-----------------0.50----------------------------------------------------------------------------------
.............................................................................................................................................................................................AGGGCTGGAGGGAAAGCAG.............................................................................................................................................................................1920.500.50-------------------------------------------------------------------------------------------0.50--------
...................................................................................................................................................................................................GGAGGGAAAGCAGCGG..........................................................................................................................................................................1620.500.50---------------------0.50------------------------------------------------------------------------------
.................................................................................................................................................................................................................GGGAGGGGCGGAGGGAGGGG........................................................................................................................................................2020.500.50----------------------------------------------------------------------------------------0.50-----------
...........................................................................................................................................................................................CGAGGGCTGGAGGGAAAG................................................................................................................................................................................1830.330.33--------------------------------------------------------------------------------------------0.33-------
............................................................................................................................................................................................GAGGGCTGGAGGGAAAGC...............................................................................................................................................................................1840.250.25--------------------------0.25-------------------------------------------------------------------------
............................................................................................................................................................................................................GCAGCGGGAGGGGCGGA................................................................................................................................................................1740.250.25-----------------------------------------------------------------------------------------------0.25----
.............................................................................................................................................................................................AGGGCTGGAGGGAAAGC...............................................................................................................................................................................1750.200.20----------------------------0.20-----------------------------------------------------------------------
......................TCGAGGGGCGGGGCG........................................................................................................................................................................................................................................................................................................................................................1560.170.17-----0.17----------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................GGGGCGGAGGGAGGGGA.......................................................................................................................................................1770.140.14-------------------------------------------------------------------------------------------------0.14--
.........................AGGGGCGGGGCGGGGCCGGG................................................................................................................................................................................................................................................................................................................................................2070.140.14--------------------------------------------------------------------------------------------------0.14-
....................................................................................................................................................................................................................AGGGGCGGAGGGAGGGG........................................................................................................................................................1780.120.12---------------------0.12------------------------------------------------------------------------------
....................................................................................................................................................................................................................AGGGGCGGAGGGAGGGGTGG.....................................................................................................................................................2080.120.12---------------------------------------------------------------------------------------------------0.12

Antisense strand
CGATGCGACTCAAAGGTGAGTTTCGAGGGGCGGGGCGGGGCCGGGGCCAGGTGCGGAGCAAAGGCCGGAGTCTGGCGGGGGTGGGGCAGGCAGGGCCAAGGCTGGGTCCGGGGCGGGGCGGGCCTAGACGGGGCGGTGGAAGGGGCGGTGCCGGGGCGGGCCGGGGCGAGAATGGTTTCAGAACTGCCGAGGGCTGGAGGGAAAGCAGCGGGAGGGGCGGAGGGAGGGGATTCGGCAGCTCCAGTTCAGCTCGCTCGGCGCACCCACGCCTCGCTGCCCCGCTTCCTGCCCTCAACCTGGGCATGCGCCCCCCACCCTTCCGGCCCCCCAGAACCCGCGCCATCCCCCGGAGCCTCCCCAGAGCTGGCCGCGCAGGATGGG
.........................................................................................................((((..(((((.((.(((((...(((.((.((.......)).)).)))....)))))...))..(((....)))....)))))....((((.........)))).....))))...................................................................................................................................................................
......................................................................................................103..............................................................................................................................232...................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		TAX577453(Rovira)
total RNA. (breast)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR040007(GSM532892)
G601T. (cervix)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033731(GSM497076)
h929 Cell line (h929). (B cell)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR040012(GSM532897)
G648N. (cervix)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR038857(GSM458540)
D20. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR191409(GSM715519)
19genomic small RNA (size selected RNA from t. (breast)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		TAX577580(Rovira)
total RNA. (breast)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040029(GSM532914)
G026T. (cervix)		SRR189787SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)		SRR189783GSM339995(GSM339995)
hues6NP. (cell line)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR191519(GSM715629)
86genomic small RNA (size selected RNA from t. (breast)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037943(GSM510481)
293DcrTN. (cell line)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040009(GSM532894)
G727T. (cervix)		GSM532874(GSM532874)
G699T. (cervix)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR189785SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		TAX577739(Rovira)
total RNA. (breast)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM339994(GSM339994)
hues6. (cell line)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577590(Rovira)
total RNA. (breast)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		TAX577579(Rovira)
total RNA. (breast)		SRR015365(GSM380330)
Memory B cells (MM139). (B cell)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		GSM532879(GSM532879)
G659N. (cervix)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038862(GSM458545)
MM472. (cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR040035(GSM532920)
G001T. (cervix)		SRR191473(GSM715583)
121genomic small RNA (size selected RNA from . (breast)		SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		TAX577743(Rovira)
total RNA. (breast)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR040015(GSM532900)
G623T. (cervix)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR038860(GSM458543)
MM426. (cell line)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR038863(GSM458546)
MM603. (cell line)		SRR040028(GSM532913)
G026N. (cervix)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191600(GSM715710)
90genomic small RNA (size selected RNA from t. (breast)		GSM532882(GSM532882)
G696T. (cervix)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR037937(GSM510475)
293cand2. (cell line)
......................................................................................................................................................................................................................................TTCGGCAGCTCCAGTCATC.................................................................................................................................... 194.000.00---4.00------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................GCATGCGCCCCCCACGTC............................................................... 181.000.00----------------1.00-----------------------------------------------------------------------------------
................................................................................................................................................GCGGTGCCGGGGCGGGT............................................................................................................................................................................................................................ 171.000.00-----------------------------------------------------------------------1.00----------------------------
..............................................................................................................................................................................................................................................................................................................................................CCGCGCCATCCCCCGACG............................. 181.000.00----------------1.00-----------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................CCCCCACCCTTCCGGCTGG...................................................... 191.000.00------------------------------------------------1.00---------------------------------------------------
.....................................................................................................................................................................................................................................ATTCGGCAGCTCCAGGGCC..................................................................................................................................... 191.000.00----------1.00-----------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................CAGCTCCAGTTCAGCGCAT............................................................................................................................... 191.000.00-----------------1.00----------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................GCACCCACGCCTCGCATAG....................................................................................................... 191.000.00----------------------------------------------------------------------------1.00-----------------------
..............................................................................................................................................................................................................................................CTCCAGTTCAGCTCGACGT............................................................................................................................ 191.000.00------------------------------1.00---------------------------------------------------------------------
.......................................................................................................................................................................................TCCCTCCAGCCCTCGGCAG................................................................................................................................................................................... 1911.001.00----------------------------------1.00-----------------------------------------------------------------
....................................GGGGCCGGGGCCAGGTCCT...................................................................................................................................................................................................................................................................................................................................... 191.000.00-----------------------------------------------------------1.00----------------------------------------
...........................................................................................................................................................................................................................................................................................................................CCTTCCGGCCCCCCAGACTG.............................................. 201.000.00--1.00-------------------------------------------------------------------------------------------------
........................................................................CTGCCTGCCCCACCCCCGCCA................................................................................................................................................................................................................................................................................................ 2111.001.00--------------------------------------------------------------------------------1.00-------------------
.............................................................................................................................................................................................................................GCCGAATCCCCTCCC................................................................................................................................................. 1520.500.50-----------------------0.50----------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................GCAGCGAGGCGTGGGTGC........................................................................................................ 1830.330.33-------------------------0.33--------------------------------------------------------------------------