uc009wry.2_intron_0_0_chr1_156308397

TCAACTCTAGGGTTGGGTGCTGGGGTTGCGGCTTTCGGTTAACACCGCAGGTGAGGTCGTTAAACTGTGTATTGCGACTCGGCTCCTATCGGACCGTGAAGGCTAAGAAAGGCTTCACAGTTCCCACTCTTTTGGTCTAGCCTTAGCAACAGGTGGACTAGAGAGGCGGGACTCCAGCCAGCACATGGGGGAAAGACCTGCCGGCTTGGCGCAGGGTGAAGTGGGAGTTGTAGTCTTACCGGGCCGGACT
..........................................................................................(((..((((((.((.....)).))))))...((((.(((.(((((((((.(((.......)))))))))))))))..)))).)))...........................................................................
...................................................................................84...........................................................................................177.......................................................................

Size

Perfect hit

Total Norm

Perfect Norm

SRR553576(SRX182782)
source: Testis. (testes)

SRR207116(GSM721078)
Nuclear RNA. (cell line)

SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)

SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)

SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)

DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)

SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)

SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)

SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)

DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)

SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)

SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)

SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)

SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)

SRR060168(GSM565978)
5-8F_nucleus. (cell line)

RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)

SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)

SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)

SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)

SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)

GSM532876(GSM532876)
G547T. (cervix)

SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR207111(GSM721073)
Whole cell RNA. (cell line)

SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)

DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)

DRR001484(DRX001038)
"Hela long nuclear cell fraction, control". (hela)

DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)

SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)

SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)

SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)

GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)

SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)

SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)

DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)

GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)

SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)

TAX577744(Rovira)
total RNA. (breast)

SRR033728(GSM497073)
MALT (MALT413). (B cell)

SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)

GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)

SRR033731(GSM497076)
h929 Cell line (h929). (B cell)

SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)

SRR191596(GSM715706)
73genomic small RNA (size selected RNA from t. (breast)

SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

.........................................................................................................................................................TGGACTAGAGAGGCGGGAAT.............................................................................

3.00

1.00

..............................................................................................................................................TTAGCAACAGGTGGACTAGAGAGGC...................................................................................

3.00

.......TAGGGTTGGGTGCTGGGGTTGCGGC..........................................................................................................................................................................................................................

3.00

......................................................................................TATCGGACCGTGAAGGCTAAGAAAGGC.........................................................................................................................................

3.00

2.00

1.00

...............................................................................................................................................TAGCAACAGGTGGACTAGAGAG.....................................................................................

3.00

1.00

2.00

.........................................................................................................................................................TGGACTAGAGAGGCGGGACTCCA..........................................................................

3.00

2.00

1.00

........AGGGTTGGGTGCTGGGGTTGC.............................................................................................................................................................................................................................

3.00

.........................................................................................................................................................TGGACTAGAGAGGCGGGACTTA...........................................................................

3.00

2.00

3.00

........................................................................................TCGGACCGTGAAGGCTAAGAAAGGC.........................................................................................................................................

2.00

.........................................................................................................................................................TGGACTAGAGAGGCGGGACT.............................................................................

2.00

1.00

...........................................ACCGCAGGTGAGGTCGTTA............................................................................................................................................................................................

2.00

1.00

...........................................................................................................AAAGGCTTCACAGTTCCCACTCTTTGGTC..................................................................................................................

2.00

0.00

2.00

.........................................................................................................................................................TGGACTAGAGAGGCGGGACTCA...........................................................................

2.00

0.00

1.00

.CAACTCTAGGGTTGGGTGCTGGG..................................................................................................................................................................................................................................

2.00

...............................................................................................................................................TAGCAACAGGTGGACTAGAGAGGC...................................................................................

2.00

.........................................................................................................................................................TGGACTAGAGAGGCGGGGCT.............................................................................

2.00

0.00

1.00

.......................................................GTCGTTAAACTGTGTATTGC...............................................................................................................................................................................

1.00

..............................................................................TCGGCTCCTATCGGACCGTGAAGGG...................................................................................................................................................

1.00

0.00

1.00

..........................................................................CGACTCGGCTCCTATCGGACC...........................................................................................................................................................

1.00

........................................................................................................................................................GTGGACTAGAGAGGCGGGG...............................................................................

1.00

................................................................................GGCTCCTATCGGACCGTGAAGGCTAAGAA.............................................................................................................................................

1.00

..........................................CACCGCAGGTGAGGTCGTTAAT..........................................................................................................................................................................................

1.00

0.00

1.00

...........................................ACCGCAGGTGAGGTCGTTAAACTGTG.....................................................................................................................................................................................

1.00

........................................................................................................................................................GTGGACTAGAGAGGCGGGACTC............................................................................

1.00

...............................................................................................................................................TAGCAACAGGTGGACTAGAG.......................................................................................

1.00

......CTAGGGTTGGGTGCTGGGG.................................................................................................................................................................................................................................

1.00

......................................................................................TATCGGACCGTGAAGGCTAAGA..............................................................................................................................................

1.00

........AGGGTTGGGTGCTGGGGTTG..............................................................................................................................................................................................................................

1.00

........................................................................................TCGGACCGTGAAGGCTAAGAAAGGGT........................................................................................................................................

1.00

0.00

1.00

.........................................................................................................................................................TGGACTAGAGAGGCGGGG...............................................................................

1.00

0.00

1.00

.........................................ACACCGCAGGTGAGGTCGTTAAA..........................................................................................................................................................................................

1.00

.......................................................................................ATCGGACCGTGAAGGCTA.................................................................................................................................................

1.00

.........................................................................................................................................................TGGACTAGAGAGGCGGGA...............................................................................

1.00

.........................................................................................................................................................TGGACTAGAGAGGCGGGAC..............................................................................

1.00

............................................................................................ACCGTGAAGGCTAAGAAAGGCTTC......................................................................................................................................

1.00

.................................................................................................................................TTTTGGTCTAGCCTTAGCAACAGGTG...............................................................................................

1.00

...............................................................................................................................................TAGCAACAGGTGGACTAGAGAGGCGGGA...............................................................................

1.00

...............................................................................................................................................................................................................................GGAGTTGTAGTCTTACCGGGCC.....

1.00

........................................................................................................................................................GTGGACTAGAGAGGCGGGACTCCA..........................................................................

1.00

.........................................................................................................................................................TGGACTAGAGAGGCGGGACTT............................................................................

1.00

2.00

1.00

........................................................................................................................................................GTGGACTAGAGAGGCGGG................................................................................

1.00

.........................................................................................................................................................TGGACTAGAGAGGCGGGACTCAT..........................................................................

1.00

0.00

1.00

.........................................................CGTTAAACTGTGTATTGC...............................................................................................................................................................................

1.00

............................................................................................................................................................................................................................GTGGGAGTTGTAGTCTTACCGG........

1.00

...........GTTGGGTGCTGGGGTTGCGG...........................................................................................................................................................................................................................

1.00

........................................................................................................................................................GTGGACTAGAGAGGCGGGA...............................................................................

1.00

...............................................CAGGTGAGGTCGTTAAACTGTG.....................................................................................................................................................................................

1.00

.............................................................................................................................ACTCTTTTGGTCTAG..............................................................................................................

0.14

TCAACTCTAGGGTTGGGTGCTGGGGTTGCGGCTTTCGGTTAACACCGCAGGTGAGGTCGTTAAACTGTGTATTGCGACTCGGCTCCTATCGGACCGTGAAGGCTAAGAAAGGCTTCACAGTTCCCACTCTTTTGGTCTAGCCTTAGCAACAGGTGGACTAGAGAGGCGGGACTCCAGCCAGCACATGGGGGAAAGACCTGCCGGCTTGGCGCAGGGTGAAGTGGGAGTTGTAGTCTTACCGGGCCGGACT ..........................................................................................(((..((((((.((.....)).))))))...((((.(((.(((((((((.(((.......)))))))))))))))..)))).)))........................................................................... ...................................................................................84...........................................................................................177.......................................................................	Size	Perfect hit	Total Norm	Perfect Norm	SRR553576(SRX182782) source: Testis. (testes)	SRR207116(GSM721078) Nuclear RNA. (cell line)	SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line)	SRR326282(GSM769512) "Dicer mRNA was knocked down using siDicer, t. (cell line)	SRR033725(GSM497070) Unmutated CLL (CLLU626). (B cell)	DRR001488(DRX001042) "Hela short nuclear cell fraction, LNA(+)". (hela)	SRR033722(GSM497067) KMS12 cell line (KMS12). (B cell)	SRR039625(GSM531988) HBV(-) HCV(-) HCC Tissue Sample. (liver)	SRR039620(GSM531983) HBV(+) Adjacent Tissue Sample 2. (liver)	DRR000557(DRX000315) "THP-1 whole cell RNA, after 3 day treatment . (cell line)	SRR207112(GSM721074) RRP40 knockdown. (RRP40 cell line)	SRR553573(SRX182779) source: Cerebellum. (Cerebellum)	SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR330874(SRX091712) tissue: skin psoriatic involveddisease state:. (skin)	SRR326280(GSM769510) total cell content of unperturbed cells was s. (cell line)	SRR060168(GSM565978) 5-8F_nucleus. (cell line)	RoviraIPAgo2(Rovira) total RNA. (ago2 breast)	SRR330889(SRX091727) tissue: skin psoriatic uninvolveddisease stat. (skin)	SRR033712(GSM497057) Burkitt Lymphoma (BL510). (B cell)	SRR330872(SRX091710) tissue: skin psoriatic involveddisease state:. (skin)	SRR033718(GSM497063) Multiple Myeloma (U266). (B cell)	SRR330879(SRX091717) tissue: skin psoriatic involveddisease state:. (skin)	GSM532876(GSM532876) G547T. (cervix)	SRR330881(SRX091719) tissue: skin psoriatic uninvolveddisease stat. (skin)	SRR207111(GSM721073) Whole cell RNA. (cell line)	SRR039190(GSM494809) PBMCs were isolated by ficoll gradient from t. (blood)	DRR000556(DRX000314) "THP-1 whole cell RNA, after 3 day treatment . (cell line)	DRR001484(DRX001038) "Hela long nuclear cell fraction, control". (hela)	DRR000558(DRX000316) "THP-1 whole cell RNA, after 3 day treatment . (cell line)	SRR207118(GSM721080) RRP40 knockdown. (RRP40 cell line)	SRR387910(GSM843862) antibody for ip: Ago2. (ago2 cell line)	SRR039636(GSM518473) THP1_cyto_sRNAs. (cell line)	GSM1105749AGO2(GSM1105749) small RNA sequencing data. (ago2 hela)	SRR207114(GSM721076) "IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)	SRR039635(GSM518472) THP1_nuc_sRNAs. (cell line)	DRR001489(DRX001043) "Hela short nuclear cell fraction, control". (hela)	GSM450608(GSM450608) miRNA sequencing raw reads from post-mortem s. (brain)	SRR107296(GSM677703) 18-30nt fraction of small RNA. (cell line)	TAX577744(Rovira) total RNA. (breast)	SRR033728(GSM497073) MALT (MALT413). (B cell)	SRR363673(GSM830250) cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)	GSM450605(GSM450605) miRNA sequencing raw reads from post-mortem s. (brain)	SRR033731(GSM497076) h929 Cell line (h929). (B cell)	SRR039637(GSM518474) THP1_total_sRNAs. (cell line)	SRR191596(GSM715706) 73genomic small RNA (size selected RNA from t. (breast)	SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
...............................................................................................................GAGTGGGAACTGTGAAGC.........................................................................................................................	18	1	4.00	4.00	-	-	4.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................ACCAAAAGAGTGGGAACTGTGAAGC..................................................................................................................	25	1	4.00	4.00	-	4.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.........................................................................................................................................................................CCCCCATGTGCTGGCTGGAGTC...........................................................	22	1	2.00	2.00	-	2.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.....................................................................................................................ACCAAAAGAGTGGGAACTG..................................................................................................................	19	1	2.00	2.00	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-
.................................................................................................................ACCAAAAGAGTGGGAACTGTGAA..................................................................................................................	23	1	2.00	2.00	-	-	-	-	-	-	-	2.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
........................................................................................................................................................................ATGTGCTGGCTGGAGTCC................................................................	18	1	1.00	1.00	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.....................................................................................................................................................................ATGTGCTGGCTGGAGTCCCGC................................................................	21	1	1.00	1.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.........................................................................................................................................................................CATGTGCTGGCTGGAGTC...............................................................	18	1	1.00	1.00	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...........................................................................................................................................................................CTCCAGCCAGCACATGGGC............................................................	19		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-
...................................................................................CACGGTCCGATAGGA........................................................................................................................................................	15	1	1.00	1.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
............................................................................................................................................................................................GGGAAAGACCTGCCGGCCG...........................................	19		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...........................................................................................................................................................................CCCATGTGCTGGCTGGAG.............................................................	18	1	1.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-
....................................................................................................GTGGGAACTGTGAAGCCTTTCTTAGCC...........................................................................................................................	27	1	1.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.............................................................................................................................................CTTAGCAACAGGTGGAATT..........................................................................................	19		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...........................................................................................................................................................................CCCCCATGTGCTGGCTGGAG...........................................................	20	1	1.00	1.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.....................................................................................................................CCAAAAGAGTGGGAACTG...................................................................................................................	18	2	0.50	0.50	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	0.50	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................TGGGAACTGTGAAGC............................................................................................................................	15	7	0.29	0.29	-	-	-	0.14	-	0.14	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-