ID: uc009wrp.2_intron_1_0_chr1_156105913_f
GENE: (2)
chr1:156105863-156106054+


(1)
AGO1.ip 		(2)
AGO2.ip 		(1)
AGO3.ip 		(6)
B-CELL 		(2)
BRAIN 		(16)
BREAST 		(21)
CELL-LINE 		(8)
CERVIX 		(6)
HEART 		(4)
HELA 		(6)
LIVER 		(2)
OTHER 		(40)
SKIN 		(1)
TESTES 		(2)
UTERUS 		(1)
XRN.ip

Sense strand
GACATGGAGATCCACGCCTACCGCAAGCTCTTGGAGGGCGAGGAGGAGAGGTGGGCTGGGGAGACGTCGGGGAGGTGCTGGCAGTGTCCTCTGGCCGGCAACTGGCCTTGACTAGACCCCCACTTGGTCTCCCTCTCCCCAGGCTACGCCTGTCCCCCAGCCCTACCTCGCAGCGCAGCCGTGGCCGTGCTT
..................................................((.(((((((((.(((((((.......))))).)).))).)))))).)).............................................................................................
..................................................51......................................................107...................................................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		TAX577588(Rovira)
total RNA. (breast)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		TAX577745(Rovira)
total RNA. (breast)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		TAX577743(Rovira)
total RNA. (breast)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR037937(GSM510475)
293cand2. (cell line)		TAX577579(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		TAX577738(Rovira)
total RNA. (breast)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		GSM532876(GSM532876)
G547T. (cervix)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		GSM532874(GSM532874)
G699T. (cervix)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)		TAX577746(Rovira)
total RNA. (breast)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577589(Rovira)
total RNA. (breast)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		GSM532889(GSM532889)
G576N. (cervix)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040010(GSM532895)
G529N. (cervix)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR191599(GSM715709)
89genomic small RNA (size selected RNA from t. (breast)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR191549(GSM715659)
105genomic small RNA (size selected RNA from . (breast)		TAX577741(Rovira)
total RNA. (breast)		SRR040039(GSM532924)
G531T. (cervix)		SRR444050(SRX128898)
Sample 10cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)		SRR038854(GSM458537)
MM653. (cell line)		SRR038861(GSM458544)
MM466. (cell line)		TAX577590(Rovira)
total RNA. (breast)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553576(SRX182782)
source: Testis. (testes)		SRR038857(GSM458540)
D20. (cell line)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR189786TAX577744(Rovira)
total RNA. (breast)		SRR038863(GSM458546)
MM603. (cell line)		SRR191582(GSM715692)
95genomic small RNA (size selected RNA from t. (breast)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR038862(GSM458545)
MM472. (cell line)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)		SRR040014(GSM532899)
G623N. (cervix)		GSM532887(GSM532887)
G761N. (cervix)		SRR040026(GSM532911)
G220N. (cervix)		SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
..................................................GTGGGCTGGGGAGACGT.............................................................................................................................17153.0053.00-2.007.002.003.00-5.002.00--2.00--1.00---1.00-1.00-2.00------1.00----------1.00-1.001.00-2.00--2.00--1.00-1.001.001.00-1.001.00---1.00----------------1.001.00-----1.001.00-1.00-1.001.00---1.00-1.00---1.00--------------
..................................................GTGGGCTGGGGAGACGTCG...........................................................................................................................19111.0011.00-1.00---1.00----------1.00-1.001.00----1.00-----------------------2.00----------------------------1.00--------------1.00-------1.00---------------
.....................................................................................GTCCTCTGGCCGGCACCA.........................................................................................188.000.00-----3.00-----------------------------------------------------------------1.001.00--1.001.00----1.00----------------------------------
..................................................GTGGGCTGGGGAGACGTCGGG.........................................................................................................................2117.007.00-3.00----------------------1.00----------1.00--------------------------------------------------------------1.001.00----------------
..................................................GTGGGCTGGGGAGACGTCGGGGAG......................................................................................................................2417.007.007.00-------------------------------------------------------------------------------------------------------------------
..................................................GTGGGCTGGGGAGACGTCGGGGAGG.....................................................................................................................2516.006.003.001.00-------------------------2.00----------------------------------------------------------------------------------------
..............................................................................TGGCAGTGTCCTCTGGTTGT..............................................................................................204.000.00---------4.00----------------------------------------------------------------------------------------------------------
................................GGAGGGCGAGGAGGAGAGGC............................................................................................................................................204.000.00--------------2.00-----1.00-----1.00-----------------------------------------------------------------------------------------
..................................................GTGGGCTGGGGAGACGTC............................................................................................................................1814.004.00----------1.00------------------------1.00----------------------------1.00----1.00----------------------------------------------
........GATCCACGCCTACCGCAAGCTCTTGGAGG...........................................................................................................................................................2913.003.00---3.00----------------------------------------------------------------------------------------------------------------
.................................GAGGGCGAGGAGGAGAGGCT...........................................................................................................................................2033.000.33----------------------2.00-------------1.00-------------------------------------------------------------------------------
..................................................GTGGGCTGGGGAGACGTCGGGG........................................................................................................................2213.003.002.00---------------------------------------------------------------------------------1.00---------------------------------
.................................GAGGGCGAGGAGGAGAGGC............................................................................................................................................1933.000.33----------------------1.00-----------------1.00-----------------1.00---------------------------------------------------------
.................................................................................CAGTGTCCTCTGGCCGGCA............................................................................................1913.003.00----------------------------1.00------------------------------------1.00--------------------------------------1.00-----------
................................GGAGGGCGAGGAGGAGAG..............................................................................................................................................1842.752.75--------------------------0.25-------2.00-----------------------------------------------------------------------------0.250.25--
..................................................................................AGTGTCCTCTGGCCGGC.............................................................................................1712.002.00--------------1.00-----------------------------------------------------1.00-----------------------------------------------
.........................................................................................................................ACTTGGTCTCCCTCTCCCCAGA.................................................222.000.00------------1.00-------------------------------------------------1.00-----------------------------------------------------
...................................GGGCGAGGAGGAGAGGCT...........................................................................................................................................182.000.00--------------------2.00-----------------------------------------------------------------------------------------------
..........................................................................GTGCTGGCAGTGTCCTCTGGCCGGC.............................................................................................2512.002.00-----------------------2.00--------------------------------------------------------------------------------------------
............................................................GAGACGTCGGGGAGGTGCTGGCA.............................................................................................................2312.002.00------------------2.00-------------------------------------------------------------------------------------------------
..............................TTGGAGGGCGAGGAGGCTT...............................................................................................................................................192.000.00--------------------------------------------------------------------------1.00---------------------------1.00-------------
..............................TTGGAGGGCGAGGAGGAGAGGCT...........................................................................................................................................232.000.00-------------------------------------1.00-----------------1.00------------------------------------------------------------
...................................................TGGGCTGGGGAGACGTCGA..........................................................................................................................192.000.00-------------------------1.00-------------------------1.00----------------------------------------------------------------
..................................AGGGCGAGGAGGAGAGGCT...........................................................................................................................................1932.000.33--------2.00-----------------------------------------------------------------------------------------------------------
................................GGAGGGCGAGGAGGAGAGGCT...........................................................................................................................................212.000.00--------------------------1.00-----------------------------------------------------1.00-----------------------------------
..................................AGGGCGAGGAGGAGAGGC............................................................................................................................................1832.000.33--------1.00------------1.00----------------------------------------------------------------------------------------------
.............................CTTGGAGGGCGAGGAGGAGAGG.............................................................................................................................................2212.002.00-------------1.00---------------1.00--------------------------------------------------------------------------------------
.........................................................................................................................................................CCCCCAGCCCTACCTCGCAGCG.................2212.002.00-------------------1.00-------------1.00----------------------------------------------------------------------------------
...........................................................................TGCTGGCAGTGTCCTCTGGCCG...............................................................................................2212.002.00----------------2.00---------------------------------------------------------------------------------------------------
..............................................................................................................................................................................GCAGCCGTGGCCGTGTGG182.000.00----1.00-------1.00-------------------------------------------------------------------------------------------------------
...................................................TGGGCTGGGGAGACGTC............................................................................................................................1712.002.00-----------------1.00------------1.00-------------------------------------------------------------------------------------
...........................................AGGAGAGGTGGGCTGGGTG..................................................................................................................................191.000.00-----------------------------------------------------------------------------------------------------------1.00--------
...............................................................ACGTCGGGGAGGTGCTG................................................................................................................1711.001.001.00-------------------------------------------------------------------------------------------------------------------
..................................................GTGGGCTGGGGAGACGTCGGGGAGGT....................................................................................................................2611.001.00----1.00---------------------------------------------------------------------------------------------------------------
........................................................................................................................CACTTGGTCTCCCTCTCCCCAGA.................................................231.000.00-----------------------1.00--------------------------------------------------------------------------------------------
..................................AGGGCGAGGAGGAGAGGCTGA.........................................................................................................................................2131.000.33-----1.00--------------------------------------------------------------------------------------------------------------
.........................AGCTCTTGGAGGGCGAGGAGGAGAGGC............................................................................................................................................2711.001.00-----------1.00--------------------------------------------------------------------------------------------------------
...................................................TGGGCTGGGGAGACGTCGGGGAGG.....................................................................................................................2411.001.00---------------------------------------------------------------------------------------------1.00----------------------
...................................................TGGGCTGGGGAGACGTCTT..........................................................................................................................1911.002.00--------------------------------1.00-----------------------------------------------------------------------------------
..................................................GTGGGCTGGGGAGACGTCGA..........................................................................................................................2011.0011.00------------------------------------1.00-------------------------------------------------------------------------------
........................AAGCTCTTGGAGGGCGAGGAGGAGA...............................................................................................................................................2511.001.00-----------------------------------------------------------1.00--------------------------------------------------------
..................................................GTGGGCTGGGGAGACGTCGGGGAGGTGCTGGCAGT...........................................................................................................3511.001.00----1.00---------------------------------------------------------------------------------------------------------------
............CACGCCTACCGCAAGCTC..................................................................................................................................................................1811.001.00------------------------------------------1.00-------------------------------------------------------------------------
..............................................................................................................................................GCTACGCCTGTCCCCCAGCCCT............................2211.001.00---------------------------------------1.00----------------------------------------------------------------------------
..........................................................................................................................................CCAGGCTACGCCTGTCTGAG..................................201.000.00-------1.00------------------------------------------------------------------------------------------------------------
..........................................................................................................................................CCAGGCTACGCCTGTCTTAG..................................201.000.00-------1.00------------------------------------------------------------------------------------------------------------
..................................................GTGGGCTGGGGAGACGTG............................................................................................................................1811.0053.00---------------------------------------------------------------1.00----------------------------------------------------
....................................................GGGCTGGGGAGACGTAGC..........................................................................................................................181.000.00-------------------------------1.00------------------------------------------------------------------------------------
....................................................................................................ACTGGCCTTGACTAGG............................................................................161.000.00-------------------------------------------1.00------------------------------------------------------------------------
..........................................................................................................................CTTGGTCTCCCTCTCGT.....................................................171.000.00-------------------------------------1.00------------------------------------------------------------------------------
.........................AGCTCTTGGAGGGCGAGGAGGAGAG..............................................................................................................................................2511.001.00---------------1.00----------------------------------------------------------------------------------------------------
...ATGGAGATCCACGCCTACC..........................................................................................................................................................................1911.001.00-1.00------------------------------------------------------------------------------------------------------------------
........................................................TGGGGAGACGTCGGGGAG......................................................................................................................1811.001.00--------------------------------------------------1.00-----------------------------------------------------------------
.....................................................................................................................CCCCACTTGGTCTCCCTCTC.......................................................2011.001.00----------------------------------------------------------------------1.00---------------------------------------------
..................................................GTGGGCTGGGGAGACGTAGA..........................................................................................................................2011.0053.00-----------------------------------------1.00--------------------------------------------------------------------------
.........................AGCTCTTGGAGGGCGAGGAGGAGAGG.............................................................................................................................................2611.001.00-----------1.00--------------------------------------------------------------------------------------------------------
...............................................................................................................................................................GCCCTACCTCGCAGCGCAGCCGTGGCCGT....2911.001.00------------1.00-------------------------------------------------------------------------------------------------------
...................................................TGGGCTGGGGAGACGTCGGGGAG......................................................................................................................2311.001.001.00-------------------------------------------------------------------------------------------------------------------
....................................GGCGAGGAGGAGAGGTGGGCTG......................................................................................................................................2211.001.00----------------------------------------1.00---------------------------------------------------------------------------
......GAGATCCACGCCTACCGCAAGCT...................................................................................................................................................................2311.001.00--------1.00-----------------------------------------------------------------------------------------------------------
..............CGCCTACCGCAAGCTCTTGGAGGG..........................................................................................................................................................2411.001.00-------------------------------------------------1.00------------------------------------------------------------------
..........................................................................................................................CTTGGTCTCCCTCTCCCCAGT.................................................211.000.00---------------1.00----------------------------------------------------------------------------------------------------
...................................GGGCGAGGAGGAGAG..............................................................................................................................................1501.001.00---------------------------------------------1.00----------------------------------------------------------------------
...................................................................CGGGGAGGTGCTGGCGTCT..........................................................................................................191.000.00---1.00----------------------------------------------------------------------------------------------------------------
..................................................GTGGGCTGGGGAGACGTCGGGGAGGTGCTG................................................................................................................3011.001.00-------------------------1.00------------------------------------------------------------------------------------------
...ATGGAGATCCACGCCTACCGCAAGCT...................................................................................................................................................................2611.001.00-----------1.00--------------------------------------------------------------------------------------------------------
..................................................GTGGGCTGGGGAGACGTCGGGGAT......................................................................................................................241.000.00--------------------------------1.00-----------------------------------------------------------------------------------
.................................................................................CAGTGTCCTCTGGCCGGCAA...........................................................................................2011.001.00---------------------------------------------------------------------------------------1.00----------------------------
......................GCAAGCTCTTGGAGGGCGAGGAGGAGGG..............................................................................................................................................281.000.00------------1.00-------------------------------------------------------------------------------------------------------
..................................................GTGGGCTGGGGAGACGTCGGGGAGGTGCTGG...............................................................................................................3111.001.00---------------------------------1.00----------------------------------------------------------------------------------
..........................................................................................................................................................CCCCAGCCCTACCTCGCAGCG.................2111.001.00-----------------------------1.00--------------------------------------------------------------------------------------
..............................TTGGAGGGCGAGGAGGAGAGGCC...........................................................................................................................................231.000.00-------------------------------------------1.00------------------------------------------------------------------------
...........................CTCTTGGAGGGCGAGGAGGAGAGG.............................................................................................................................................2411.001.00-------------------------------1.00------------------------------------------------------------------------------------
...ATGGAGATCCACGCCTAAC..........................................................................................................................................................................191.000.00-----------1.00--------------------------------------------------------------------------------------------------------
.............................................................................................................................................................CAGCCCTACCTCGCAGCG.................1811.001.00-------------1.00------------------------------------------------------------------------------------------------------
......GAGATCCACGCCTACCGCAAGC....................................................................................................................................................................2211.001.00----------------------------------------------1.00---------------------------------------------------------------------
..............................TTGGAGGGCGAGGAGGAGAG..............................................................................................................................................2011.001.00----------------------------------------------1.00---------------------------------------------------------------------
............................................................GAGACGTCGGGGAGGTGCTGGC..............................................................................................................2211.001.00-------------------------------------------------1.00------------------------------------------------------------------
..............................................................................................CCGGCAACTGGCCTTGACTAGACCCCC.......................................................................2711.001.00---------------1.00----------------------------------------------------------------------------------------------------
..................................................GTGGGCTGGGGAGACGTCGGGGAGGCG...................................................................................................................2711.006.00----------------------------------------------------------------------------------------------1.00---------------------
..................................................GTGGGCTGGGGAGACGTGGGG.........................................................................................................................2111.0053.00------------------------------------------------------------------------------------------------1.00-------------------
...................................................TGGGCTGGGGAGACGTCGGGGAGGTT...................................................................................................................261.000.00------------------------1.00-------------------------------------------------------------------------------------------
.........................................................................................................................ACTTGGTCTCCCTCTCCCCAGT.................................................221.000.00------------------------------------------------------------------1.00-------------------------------------------------
...................ACCGCAAGCTCTTGGATTT..........................................................................................................................................................191.000.00-------------------------------------------------------------------------1.00------------------------------------------
.........................................................................................................................................CCCAGGCTACGCCTGTCTGAG..................................211.000.00-------1.00------------------------------------------------------------------------------------------------------------
...................................................................CGGGGAGGTGCTGGCAGTG..........................................................................................................1911.001.00---------------------------------------------------------------------------------------------------------1.00----------
.............................CTTGGAGGGCGAGGAGGAGAG..............................................................................................................................................2111.001.00---------------------------------------------------1.00----------------------------------------------------------------
...........................CTCTTGGAGGGCGAGGAGGAG................................................................................................................................................2111.001.00----------------------------------------------------------------------------------------------------------1.00---------
...................................................TGGGCTGGGGAGACGTCGAA.........................................................................................................................201.000.00--------------------------------------1.00-----------------------------------------------------------------------------
...................................................TGGGCTGGGGAGACGTCGGGGAGGTGCTGGCAG............................................................................................................3311.001.00----------1.00---------------------------------------------------------------------------------------------------------
...................................................TGGGCTGGGGAGACGTCGGG.........................................................................................................................2011.001.00-----------------------------------------------------------------------------------1.00--------------------------------
...................................................................................................................................CCTCTCCCCAGGCTAGAA...........................................181.000.00-----------------1.00--------------------------------------------------------------------------------------------------
................CCTACCGCAAGCTCTTGGAG............................................................................................................................................................2011.001.00------------------------------------------------------------1.00-------------------------------------------------------
......................................................GCTGGGGAGACGTCGG..........................................................................................................................1611.001.00-------------------------------------------------------------------------------------------------------1.00------------
................................................................................................................................................................CCCTACCTCGCAGCG.................1511.001.00-------------------------------------------------------------------1.00------------------------------------------------
...................................................TGGGCTGGGGAGACGTCGGGGAGGTGCTGGCA.............................................................................................................3211.001.00---1.00----------------------------------------------------------------------------------------------------------------
.............................................................................................................................................GGCTACGCCTGTCCCGG..................................171.000.00------------------------------1.00-------------------------------------------------------------------------------------
..................................................................................AGTGTCCTCTGGCCGGCA............................................................................................1811.001.00-------------------------1.00------------------------------------------------------------------------------------------
..........TCCACGCCTACCGCAAGCTCTTG...............................................................................................................................................................2311.001.00-----------------------------------------------------------------------------------------1.00--------------------------
..................................................GTGGGCTGGGGAGACG..............................................................................................................................1630.670.67-------------0.67------------------------------------------------------------------------------------------------------
.................................GAGGGCGAGGAGGAGAG..............................................................................................................................................1740.500.50--0.25--0.25--------------------------------------------------------------------------------------------------------------
....................................................................GGGGAGGTGCTGGCAGT...........................................................................................................1720.500.50--------------0.50-----------------------------------------------------------------------------------------------------
...................................................TGGGCTGGGGAGACGT.............................................................................................................................1620.500.50-------------------------------------------------------------------------------------------------------------0.50------
...................................................TGGGCTGGGGAGACG..............................................................................................................................1580.500.50------------------------------------------------------------------------------------------------------------0.50-------
..............................................................................TGGCAGTGTCCTCTGGCC................................................................................................1820.500.50----------------------------------------------------0.50---------------------------------------------------------------
..................................AGGGCGAGGAGGAGAGG.............................................................................................................................................1730.330.33---------------------------------------------------------------------------------------------------------------0.33----
.................................GAGGGCGAGGAGGAGAGG.............................................................................................................................................1830.330.33--------------------------------------------------------------------------------------------------------------0.33-----
.............................................................................................................................................................CAGCCCTACCTCGCA....................1540.250.25------------------------------------------------------------------------------------------------------------------0.25-
..................................AGGGCGAGGAGGAGAG..............................................................................................................................................1670.140.14-------------------------------------------------------------------------------------------------------------------0.14
................................................................................GCAGTGTCCTCTGGCC................................................................................................1680.120.12-----------------------------------------------------0.12--------------------------------------------------------------

Antisense strand
GACATGGAGATCCACGCCTACCGCAAGCTCTTGGAGGGCGAGGAGGAGAGGTGGGCTGGGGAGACGTCGGGGAGGTGCTGGCAGTGTCCTCTGGCCGGCAACTGGCCTTGACTAGACCCCCACTTGGTCTCCCTCTCCCCAGGCTACGCCTGTCCCCCAGCCCTACCTCGCAGCGCAGCCGTGGCCGTGCTT
..................................................((.(((((((((.(((((((.......))))).)).))).)))))).)).............................................................................................
..................................................51......................................................107...................................................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		TAX577588(Rovira)
total RNA. (breast)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		TAX577745(Rovira)
total RNA. (breast)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		TAX577743(Rovira)
total RNA. (breast)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR037937(GSM510475)
293cand2. (cell line)		TAX577579(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		TAX577738(Rovira)
total RNA. (breast)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		GSM532876(GSM532876)
G547T. (cervix)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		GSM532874(GSM532874)
G699T. (cervix)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)		TAX577746(Rovira)
total RNA. (breast)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577589(Rovira)
total RNA. (breast)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		GSM532889(GSM532889)
G576N. (cervix)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040010(GSM532895)
G529N. (cervix)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR191599(GSM715709)
89genomic small RNA (size selected RNA from t. (breast)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR191549(GSM715659)
105genomic small RNA (size selected RNA from . (breast)		TAX577741(Rovira)
total RNA. (breast)		SRR040039(GSM532924)
G531T. (cervix)		SRR444050(SRX128898)
Sample 10cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)		SRR038854(GSM458537)
MM653. (cell line)		SRR038861(GSM458544)
MM466. (cell line)		TAX577590(Rovira)
total RNA. (breast)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553576(SRX182782)
source: Testis. (testes)		SRR038857(GSM458540)
D20. (cell line)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR189786TAX577744(Rovira)
total RNA. (breast)		SRR038863(GSM458546)
MM603. (cell line)		SRR191582(GSM715692)
95genomic small RNA (size selected RNA from t. (breast)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR038862(GSM458545)
MM472. (cell line)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)		SRR040014(GSM532899)
G623N. (cervix)		GSM532887(GSM532887)
G761N. (cervix)		SRR040026(GSM532911)
G220N. (cervix)		SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
................................TCCTCCTCGCCCTCC................................................................................................................................................. 1501.001.00---------------------------------------------1.00----------------------------------------------------------------------
.......................................................................................CAGTTGCCGGCCAGAGG........................................................................................ 1711.001.00--------------------------------------1.00-----------------------------------------------------------------------------
.....................................GCGAGGAGGAGAGGTGGGGC....................................................................................................................................... 201.000.00------------------------------------------------------------------------------------1.00-------------------------------