| (1) BRAIN | (8) CELL-LINE | (2) LIVER | (1) OTHER | (1) SKIN |
| TTGATCCTAATCCTTCCTTACGAGATATTGACACACAAGCTAAATACCAGGTATTACATGTATATTTATATTCTGTAAATGGTTGCACACCCCCTCAATGCTCCCTTTTAAATAGATAAACTTTAAACATTTTTCATATTACATTTCTAATATTCTTTATACTGGGGATTTTGTTTGTTTATTTTTATTTATTTTTATTATTATTTTTTTTTTGAGACAGAGTTTCGCTCTTGTTGCCCAAGCTGGAGTG ................................................................................((..(((...........)))..))....(((((((((((...((((((.....((......((..(((.(((.....))).)))..))..))..))))))..)))))))))))........................................................ ............................................................................77................................................................................................................................207......................................... | Size | Perfect hit | Total Norm | Perfect Norm | SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR037937(GSM510475) 293cand2. (cell line) | SRR189784 | SRR039620(GSM531983) HBV(+) Adjacent Tissue Sample 2. (liver) | GSM450605(GSM450605) miRNA sequencing raw reads from post-mortem s. (brain) | SRR330886(SRX091724) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ......................................................................................................................................................................................TTTTATTTATTTTTATTATAG............................................... | 21 | 106.00 | 0.00 | 36.00 | 33.00 | 22.00 | 15.00 | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................................TTTATTTTTATTATTATTTTCAG........................................ | 23 | 3.00 | 0.00 | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................................................................................TTTATTTATTTTTATTATTATTTTTTTTTAG.................................... | 31 | 3.00 | 0.00 | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................................................................................TTTTATTTATTTTTATTACAG............................................... | 21 | 2.00 | 0.00 | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................................................................................TTTTATTTATTTTTATTATTATTTTTTTTTAG.................................... | 32 | 2.00 | 0.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................ATACTGGGGATTTTGTTTGTTTATTTC................................................................. | 27 | 2.00 | 0.00 | - | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................................TTTTTATTATTATTTTTTTAATG.................................... | 23 | 2.00 | 0.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................GTTTATTTTTATTTATTTTTATC................................................... | 23 | 2.00 | 0.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................................TTTTTATTATTATTTTTTTTTCTAG.................................. | 25 | 2.00 | 0.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................ACTGGGGATTTTGTTGAA........................................................................ | 18 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | |
| ................................................................................................................................................................ACTGGGGATTTTGTTTGTTTAT.................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................TTATTTTTATTATTATTTTTTTTCAAG................................... | 27 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................................................................................TTTTATTTATTTTTATTATTATTTTTTTTTATT................................... | 33 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................ATACTGGGGATTTTGTTTGTTTATTC.................................................................. | 26 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................................ATTTTTATTATTATTTTTTTTTTTTAT................................. | 27 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................................TTTTTATTATTATTTTTTTTTCAG................................... | 24 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................ATACTGGGGATTTTGTTTGTTTATTTTTATTC............................................................ | 32 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................................TTTATTTTTATTATTATTTTTTTCAT..................................... | 26 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................ATACTGGGGATTTTGTTTGTTTATTTTT................................................................ | 28 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................ACTGGGGATTTTGTTTGTTTATTTTTACTT............................................................ | 30 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................ACTGGGGATTTTGTTTGTTTATTTTTATTC............................................................ | 30 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | |
| .............................................................................................................................................................................................................................GTTTCGCTCTTGTTGCCGAGT........ | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | |
| .................................................................................GTTGCACACCCCCTCAATGCT.................................................................................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ..............................................................................................................................................................ATACTGGGGATTTTGTTTGTTTACTT.................................................................. | 26 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | |
| ....................................................................................................................................................................................ATTTTTATTTATTTTTATTATAG............................................... | 23 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................ACTGGGGATTTTGTTTGTTTACTT.................................................................. | 24 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................................ATTTTTATTATTATTTTTTTTGCG.................................... | 24 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | |
| .................................................................................................................................................................................TTTATTTTTATTTATTTTTATTATTATTTTTTTTG...................................... | 35 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | |
| .............................................................................................................................................................TATACTGGGGATTTTGTTTGTTTATTTCTA............................................................... | 30 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | |
| .......................................................................................................................................................................................................ATTATTTTTTTTTTGAGACAGGACG.......................... | 25 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | |
| ......................................................................................................................................................................................TTTTATTTATTTTTATTATTAAATG........................................... | 25 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................................................TTATTTTTATTTATTTTTATTATTATTTTTTTT....................................... | 33 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................TTTTATTATTATTTTTTTATG..................................... | 21 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................................................................ATTTTGTTTGTTTATTTTTATTTATTC........................................................ | 27 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | |
| ....................................................................................................................................................................GGGATTTTGTTTGTTTATTTTTATT............................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................TTTATTATTATTTTTTTTTCACG.................................. | 23 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................TACTGGGGATTTTGTTTGTTTATTTTTATCT............................................................ | 31 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................................ATTTTTATTATTATTTTTTTTTAA.................................... | 24 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................TTACATTTCTAATATTAG.............................................................................................. | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | |
| .......................................................................................................................................................................................TTTATTTATTTTTATTATTACTTG........................................... | 24 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................................................ATTTTTTTTTTGAGACAGAGTTTCTG...................... | 26 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | |
| .......................................................................................................................................................................ATTTTGTTTGTTTATTTTTATACTT.......................................................... | 25 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | |
| .....................................................................................................................................................................................................TTATTATTTTTTTTTTGAGACTGG............................. | 24 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................................ATTTATTTTTATTATTATTTCT.......................................... | 22 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................................TTTTATTATTATTTTTTTTTAAAG.................................. | 24 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................................................................................TTTATTTATTTTTATTACAG............................................... | 20 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................................................................TTTATTTTTATTTATTTTTATTATAG............................................... | 26 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................................TTTTTATTATTATTTTTTTTTTGGGG................................. | 26 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | |
| ......................................................................................................................................................................................TTTTATTTATTTTTATTATTAAATT........................................... | 25 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................................................................................................................TATTTTTATTATTATTTATTG........................................ | 21 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................ATACTGGGGATTTTGTTTGTTTACC................................................................... | 25 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | |
| ............................................................................................................................................................................................TTATTTTTATTATTATTTTTTTTATTG................................... | 27 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................ACTGGGGATTTTGTTTTA........................................................................ | 18 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | |
| .....................................................................................................................................................................................TTTTTATTTATTTTTATTATTATATG........................................... | 26 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................................................................TTTATTTTTATTTATTTTTATTATTATTTTCTT........................................ | 33 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | |
| ..........................................................................................................................................................................................ATTTATTTTTATTATTATTTTTTGG....................................... | 25 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | |
| ..................................................................................................................................................................................................................TTTGAGACAGAGTTTCGCCCC................... | 21 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | |
| .......................................................................................................................................................................ATTTTGTTTGTTTATTTTTATTCATC......................................................... | 26 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | |
| .............................................................................................................................................................TATACTGGGGATTTTGTTCGTT....................................................................... | 22 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................................ATTTTTATTATTATTTTTTCTAG..................................... | 23 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................................................................TTATTTATTTTTATTATTATTTTTTTTTA..................................... | 29 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................................................................................................................TATTTTTATTATTATTTTTTTTTTTAG.................................. | 27 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................ATACTGGGGATTTTGTTTGTTTATTTTTATC............................................................. | 31 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................................TTTTATTATTATTTTTTTTCTAG................................... | 23 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................ACTGGGGATTTTGTTAAT........................................................................ | 18 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | |
| .................................................................................................................................................................................TTTATTTTTATTTATTTTTATTATTATTTTTTTTT...................................... | 35 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................TTTTATTTATTTTTATTATTATTTTTTTTTAT.................................... | 32 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................TACTGGGGATTTTGTTTGTTTATC................................................................... | 24 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................TACTGGGGATTTTGTTTGTTTATTTTTATC............................................................. | 30 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | |
| .........................................................................................................................................................TCTTTATACTGGGGATT................................................................................ | 17 | 2 | 0.50 | 0.50 | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - |
| ...................................................................................................................ATAAACTTTAAACATTTT..................................................................................................................... | 18 | 7 | 0.29 | 0.29 | - | 0.14 | 0.14 | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................TTTATTTTTATTATTATTTTTTTTTTGAG.................................. | 29 | 4 | 0.25 | 0.25 | - | - | - | - | - | 0.25 | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................TTTATTTTTATTATTATTTTTTTTTTG.................................... | 27 | 4 | 0.25 | 0.25 | - | - | 0.25 | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................TTATTTTTATTATTATTTTTTTTTTG.................................... | 26 | 5 | 0.20 | 0.20 | 0.20 | - | - | - | - | - | - | - | - | - | - | - | - |
| TTGATCCTAATCCTTCCTTACGAGATATTGACACACAAGCTAAATACCAGGTATTACATGTATATTTATATTCTGTAAATGGTTGCACACCCCCTCAATGCTCCCTTTTAAATAGATAAACTTTAAACATTTTTCATATTACATTTCTAATATTCTTTATACTGGGGATTTTGTTTGTTTATTTTTATTTATTTTTATTATTATTTTTTTTTTGAGACAGAGTTTCGCTCTTGTTGCCCAAGCTGGAGTG ................................................................................((..(((...........)))..))....(((((((((((...((((((.....((......((..(((.(((.....))).)))..))..))..))))))..)))))))))))........................................................ ............................................................................77................................................................................................................................207......................................... | Size | Perfect hit | Total Norm | Perfect Norm | SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR037937(GSM510475) 293cand2. (cell line) | SRR189784 | SRR039620(GSM531983) HBV(+) Adjacent Tissue Sample 2. (liver) | GSM450605(GSM450605) miRNA sequencing raw reads from post-mortem s. (brain) | SRR330886(SRX091724) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................................................................................................................................................TTATTTTTATTTATTTTTATGG.................................................. | 22 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | |
| .........................................................................................................................................................................TTTGTTTGTTTATTTTTATTTATTCG....................................................... | 26 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | |
| .............................................................................................CTCAATGCTCCCTTTTG............................................................................................................................................ | 17 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | |
| .......................................................................................................................................................................................................................GACAGAGTTTCGCTCTTGTTGCCCAACCA...... | 29 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | |
| ....................................................................................................................................................................................................................TGAGACAGAGTTTCGCTCTC.................. | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |