ID: uc009vpa.1_intron_2_0_chr1_17323671_r.5p
GENE: ATP13A2(2)
chr1:17326306-17326555-


(1)
AGO1.ip
(3)
AGO2.ip
(4)
BREAST
(23)
CELL-LINE
(3)
CERVIX
(3)
HEART
(4)
LIVER
(2)
OTHER
(7)
SKIN
(1)
UTERUS
(1)
XRN.ip

Sense strand
TGCCGCCCTGGTGGCCGGCGAGTGCATGGTGAATGAGAGCTCTCTGACAGGTGAGCCCCCAGCCCCTGGCCTGCAGCTTCCTTCCTCCCCTGCCATCCAACCCTTTGCCCTGCGGCAAAAGTTTTCATTTGAGTTTCCTTTTCCTTTTTTGTTTTTTTGTGAGACGGAGTTTCACTCTGTTGTCCAGGCTGGAGTGCAGTGACATGATCTCAGCTCACTGCAGCCTCCACCCCCCAGGTTCAAGTGATTC
.....................................................................................................................................................((((...((((..(((((((.....))))))).(((.....)))..)))).))))..............................................
......................................................................................................................................135......................................................................208........................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR037938(GSM510476)
293Red. (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR189784DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189786SRR343334SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
TAX577588(Rovira)
total RNA. (breast)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR189787DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR040011(GSM532896)
G529T. (cervix)
SRR191610(GSM715720)
195genomic small RNA (size selected RNA from . (breast)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
SRR390723(GSM850202)
total small RNA. (cell line)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR343335SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040032(GSM532917)
G603N. (cervix)
GSM532885(GSM532885)
G850N. (cervix)
SRR343336SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
....................................................................................................................................................................................TGTCCAGGCTGGAGTGCAGTGAAA..............................................24066.006.00-55.00-7.00------2.00---------------1.00---1.00----------------------
....................................................................................................................................................................................TGTCCAGGCTGGAGTGCAGTGAAAA.............................................2509.006.00-9.00---------------------------------------------------
.................................TGAGAGCTCTCTGACAG........................................................................................................................................................................................................1728.008.00-----6.50----------0.50---------------------------0.500.50-------
..............................................................................................................................................................................................................ATCTCAGCTCACTGCAGCCTCCACCCCCAGG.............318.000.005.00-3.00--------------------------------------------------
....................................................................................................................................................................................TGTCCAGGCTGGAGTGCAGTGA................................................2206.006.00---------2.00-2.00----------------1.00----1.00-------------------
...................................................................................................................................................................................................................AGCTCACTGCAGCCTCCACCCCCAGG.............266.000.005.00-1.00--------------------------------------------------
....................................................................................................................................................................................TGTCCAGGCTGGAGTGCAGTGAGA..............................................2405.006.00-4.00-------------1.00-------------------------------------
...................................................................................................................................................................................................................AGCTCACTGCAGCCTCCACCCCCGGGT............275.000.005.00----------------------------------------------------
....................................................................................................................................................................................TGTCCAGGCTGGAGTGCAGGGAA...............................................235.000.00-5.00---------------------------------------------------
.....................................................................................................................................................................................GTCCAGGCTGGAGTGCAGTGAAC..............................................234.000.00-2.00---------------2.00-----------------------------------
....................................................................................................................................................................................TGTCCAGGCTGGAGTGCAGTGAGAAA............................................2604.006.00------4.00----------------------------------------------
....................................................................................................................................................................................TGTCCAGGCTGGAGTGCAGTGAAAG.............................................2504.006.00-4.00---------------------------------------------------
........................................................................................................................................................................................................................ACTGCAGCCTCCACCCCCGGGT............224.000.003.00-1.00--------------------------------------------------
.................................................................................................................................................................................TGTTGTCCAGGCTGGAGTGCTCTG.................................................243.000.00-------1.00----2.00----------------------------------------
....................................................................................................................................................................................TGTCCAGGCTGGAGTGCAGTGAAGA.............................................2503.006.00-2.00--------1.00------------------------------------------
..............................................................................................................................................................................................................ATCTCAGCTCACTGCAGCCTCCACCCCCCAGG............3213.003.002.00-1.00--------------------------------------------------
....................................................................................................................................................................................TGTCCAGGCTGGAGTGCAGTGAAAT.............................................2503.006.00-3.00---------------------------------------------------
..............................................................................................................................................................................................................ATCTCAGCTCACTGCAGCCTCCACCCCCTGGC............322.000.00--2.00--------------------------------------------------
...................................................................................................................................................................................................................AGCTCACTGCAGCCTCCACCCCCCAGGCCC.........3012.001.002.00----------------------------------------------------
...........................................................................................................................................TTTCCTTTTTTGTTTTTTTCGAG........................................................................................232.000.002.00----------------------------------------------------
...................................................................................................................................................................................................................AGCTCACTGCAGCCTCCACCCCCCGGGC...........282.000.002.00----------------------------------------------------
............................................................................................................................................TTCCTTTTTTGTTTTTTGGTG.........................................................................................212.000.00--2.00--------------------------------------------------
...............................................................................................................................................................................................................TCTCAGCTCACTGCAGCCTCCACCCCCAGG.............302.000.001.00-1.00--------------------------------------------------
...................................................................................................................................................................................................................AGCTCACTGCAGCCTCCACCCCCCAGGCTC.........3012.001.002.00----------------------------------------------------
...........................................................................................................................................................................TCACTCTGTTGTCCAGGCTGGAGTGCGGCG.................................................302.000.002.00----------------------------------------------------
....................................................................................................................................................................................TGTCCAGGCTGGAGTGCAGTAAAA..............................................242.000.00------2.00----------------------------------------------
..............................................................................................................................................................................................................ATCTCAGCTCACTGCAGCCTCCACCCCGGG..............302.000.002.00----------------------------------------------------
....................................................................................................................................................................................TGTCCAGGCTGGAGTGCAGTGAAC..............................................2402.006.00-1.00-----------1.00---------------------------------------
....................................................................................................................................................................................TGTCCAGGCTGGAGTGCAGAAA................................................222.000.00--------1.00------1.00-------------------------------------
...................................................................................................................................................................................................................AGCTCACTGCAGCCTCCACCCCCAGGG............272.000.002.00----------------------------------------------------
..............................................................................TCCTTCCTCCCCTGCCA...........................................................................................................................................................1761.831.83------------------0.33------------------------0.67----0.33-0.330.17-
..................................................................................................................................................................................................................CAGCTCACTGCAGCCTCCACCCCCCGGG............281.000.001.00----------------------------------------------------
...............................................................................................................................................................TGAGACGGAGTTTCACTCAAAC.....................................................................221.000.00------------------------1.00----------------------------
............................................................................................................................................TTCCTTTTTTGTTTTTTTCTG.........................................................................................211.000.001.00----------------------------------------------------
...................................................................................................................................................................................................................AGCTCACTGCAGCCTCCACCCCCCAG.............2611.001.00----1.00------------------------------------------------
..............................................................................................................................................................................................................ATCTCAGCTCACTGCAGCCTCCACCCCAGG..............301.000.00--1.00--------------------------------------------------
.....................................................................................................................................................................................................................CTCACTGCAGCCTCCACCCCCCAGCTC..........271.000.001.00----------------------------------------------------
...................................................................................................................................................................................TTGTCCAGGCTGGAGTGCAGTGACGCAG...........................................281.000.001.00----------------------------------------------------
...................................................................................................................................................................................................................AGCTCACTGCAGCCTCCACCCCCGG..............251.000.001.00----------------------------------------------------
.....................................................................................................................................................................................................................CTCACTGCAGCCTCCACCCCAGCT.............241.000.001.00----------------------------------------------------
....................................................................................................................................................................................TGTCCAGGCTGGAGTGCAGTGAAAC.............................................2501.006.00---------------------------1.00-------------------------
..............................................................................................................................................................................................................ATCTCAGCTCACTGCAGCCTCCACCCCCGA..............301.000.00--1.00--------------------------------------------------
..........................................................................................................................................TTTTCCTTTTTTGTTTTTTTCGTT........................................................................................241.000.00----1.00------------------------------------------------
............................................................AGCCCCTGGCCTGCACTAT...........................................................................................................................................................................191.000.00-------------------------1.00---------------------------
...................................................................................................................................................................................................................AGCTCACTGCAGCCTCCACCCCCCAGCC...........2811.001.001.00----------------------------------------------------
......................................................................................................................................................................................................................TCACTGCAGCCTCCACCCCCGGGC............241.000.001.00----------------------------------------------------
................................................................................................................................................TTTTTTGTTTTTTTGTGGGAG.....................................................................................211.000.00--1.00--------------------------------------------------
...................................................................................................................................................................................................................AGCTCACTGCAGCCTCCACCCCCCACG............271.000.001.00----------------------------------------------------
.............................................................................................................................................TCCTTTTTTGTTTTTTTTTCT........................................................................................211.000.00----1.00------------------------------------------------
..............................................................................................................................................................................................................ATCTCAGCTCACTGCAGCCTCCACCCCCGGGC............321.000.001.00----------------------------------------------------
....................AGTGCATGGTGAATGAGAGCTCTCTG............................................................................................................................................................................................................2611.001.00------------------------------------1.00----------------
...............................................................................................................................................................................................................TCTCAGCTCACTGCAGCCTCCACCCCCCAGGT...........3211.001.001.00----------------------------------------------------
...................................................................................................................................................................................................................AGCTCACTGCAGCCTCCACCCCCCAGG............2711.001.001.00----------------------------------------------------
......................................................................................................................................................................................................................TCACTGCAGCCTCCACCC..................1801.001.00--------------1.00--------------------------------------
..........................TGGTGAATGAGAGCTCTC..............................................................................................................................................................................................................1811.001.00-------1.00---------------------------------------------
.....................................................................................................................................................................................GTCCAGGCTGGAGTGCAGTGAGTT.............................................241.000.00--------------------1.00--------------------------------
...................................................................................................................................................................................................................AGCTCACTGCAGCCTCCACCCCCAGGC............271.000.001.00----------------------------------------------------
........................................................................................................................................................................................................................ACTGCAGCCTCCACCCCCAGA.............211.000.00--1.00--------------------------------------------------
...................................................................................................................................................................................................................AGCTCACTGCAGCCTCCACCCCCCAGGCT..........2911.001.001.00----------------------------------------------------
........................................................................................................................................................................................................................ACTGCAGCCTCCACCCCCCAGGCCC.........251.000.001.00----------------------------------------------------
.............................................................................................................................................TCCTTTTTTGTTTTTTTGTCCAG......................................................................................231.000.001.00----------------------------------------------------
..........................................................................................................................................TTTTCCTTTTTTGTTTTTTTGTTTCG......................................................................................261.000.00----1.00------------------------------------------------
...................................................................................................................................................................................................................AGCTCACTGCAGCCTCCACCCCCGGCT............271.000.001.00----------------------------------------------------
.................................................................................................................................................................................................................TCAGCTCACTGCAGCCTCCACCCCCGGGT............291.000.001.00----------------------------------------------------
..........................................................................................................................................TTTTCCTTTTTTGTTTTTTTGTTTTG......................................................................................261.000.00-------------------------------------1.00---------------
..............................................................................................................................................................................................................ATCTCAGCTCACTGCAGCCTCCACCCCCGG..............301.000.001.00----------------------------------------------------
...............................................................................................................................................................................................................TCTCAGCTCACTGCAGCCTCCACCCCCCAGG............3111.001.001.00----------------------------------------------------
.......................................................................................................................................................................AGTTTCACTCTGTTGTCCAGGCTGGTCTC......................................................291.000.001.00----------------------------------------------------
..............................................................................................................................................................................................................ATCTCAGCTCACTGCAGCCTCCACCCCCGGA.............311.000.00--1.00--------------------------------------------------
........................................................................................................................................................................................................................ACTGCAGCCTCCACCCAGGC..............201.000.001.00----------------------------------------------------
........................................................................................................................................................................................................................ACTGCAGCCTCCACCCCCGGGA............221.000.00--1.00--------------------------------------------------
.............................................................................................................................................................................................TGGAGTGCAGTGACATGA...........................................1801.001.00--------------------------------1.00--------------------
...................................................................................................................................................................................TTGTCCAGGCTGGAGTGCAGTGCGCG.............................................261.000.001.00----------------------------------------------------
...............................AATGAGAGCTCTCTGACAGGAG.....................................................................................................................................................................................................221.000.00-----------------------1.00-----------------------------
.....................................................................................................................................................................................................................CTCACTGCAGCCTCCACCCCCCCCAG...........261.000.001.00----------------------------------------------------
.....................................................................................................................................................................................................................CTCACTGCAGCCTCCACCCCGGGC.............241.000.001.00----------------------------------------------------
..........................................................................................................................................TTTTCCTTTTTTGTTTTTTTTGC.........................................................................................231.000.00--1.00--------------------------------------------------
............................................................................................................................................................................................CTGGAGTGCAGTGACATGACCTG.......................................231.000.00----1.00------------------------------------------------
..............................................................................................................................................................................................................ATCTCAGCTCACTGCAGCCTCCACCCCCCGGG............321.000.001.00----------------------------------------------------
................................................................................................................................................................................................................CTCAGCTCACTGCAGCCTCCACCCCCAGG.............291.000.001.00----------------------------------------------------
...................................................................................................................................................................................................................AGCTCACTGCAGCCTCCACCCCAGG..............251.000.001.00----------------------------------------------------
......................................................................................................................................................................................................................TCACTGCAGCCTCCACCCCCCGGC............241.000.001.00----------------------------------------------------
...................................................................................................................................................................................................................................CACCCCCCAGGTTCAAG......1701.001.00---------1.00-------------------------------------------
..........................................................................................................................................TTTTCCTTTTTTGTTTTTTTGAC.........................................................................................231.000.00--1.00--------------------------------------------------
..............................................................................................................................................................................................................ATCTCAGCTCACTGCAGCCTCCACCCCCAAG.............311.000.00--1.00--------------------------------------------------
...........................................................................GCTTCCTTCCTCCCCGGGC............................................................................................................................................................191.000.00------------------1.00----------------------------------
...................................................................................................................................................................................................................AGCTCACTGCAGCCTCCACCCCTGGT.............261.000.001.00----------------------------------------------------
................................ATGAGAGCTCTCTGACAGG.......................................................................................................................................................................................................1921.001.00------------0.50---0.50------------------------------------
....................AGTGCATGGTGAATGAGAGCTCTCTGACAG........................................................................................................................................................................................................3011.001.00----------------1.00------------------------------------
.......................................................................................................................................................................................................TGACATGATCTCAGCTCACTG..............................2101.001.00----------------------------------------1.00------------
.....................................................................................................................................................................................................................CTCACTGCAGCCTCCACCCCCGGGC............251.000.00--1.00--------------------------------------------------
...........................................................................................................................................................................TCACTCTGTTGTCCAGGCTGGAGCGCG....................................................271.000.001.00----------------------------------------------------
..............................................................................................................................................................................................................ATCTCAGCTCACTGCAGCCTCCACCGG.................271.000.001.00----------------------------------------------------
.................................................................................................................................................................................................................TCAGCTCACTGCAGCCTCCACCCCCAGG.............281.000.001.00----------------------------------------------------
..........................................................................................................................................TTTTCCTTTTTTGTTTTTTTGCAGG.......................................................................................251.000.001.00----------------------------------------------------
...................................................................................................................................................................................................................AGCTCACTGCAGCCTCCACCCCCCAGCCTC.........3011.001.001.00----------------------------------------------------
...................................................................................................................................................................................................................AGCTCACTGCAGCCTCCACCGGGC...............241.000.001.00----------------------------------------------------
...................................................................................................................................................................................................................AGCTCACTGCAGCCTCCACCCCCCAGGC...........2811.001.001.00----------------------------------------------------
........................................................................................................................................................................................................................ACTGCAGCCTCCACCCCGGGC.............211.000.001.00----------------------------------------------------
......................................................................................................................................................................................................................TCACTGCAGCCTCCACCCGGGT..............2201.001.001.00----------------------------------------------------
....................................................................................................................................................................................TGTCCAGGCTGGAGTGCAGTGAAAAT............................................2601.006.00---------------------1.00-------------------------------
..................CGAGTGCATGGTGAATGAGAGCTCTCTGACAGG.......................................................................................................................................................................................................3311.001.00--------1.00--------------------------------------------
...................................................................................................................................................................................................................AGCTCACTGCAGCCTCCACCCCCCAAGC...........281.000.001.00----------------------------------------------------
.........................................................................................................................................................TTTTTGTGAGACGGAGTTGC.............................................................................201.000.00--1.00--------------------------------------------------
.............................................................................................................................................................................ACTCTGTTGTCCAGGCTGGAGTGCAGTGTAC..............................................311.000.001.00----------------------------------------------------
........................................................................................................................................CCTTTTCCTTTTTTGTTTTTTGT...........................................................................................231.000.00----1.00------------------------------------------------
....................................................................................................................................................................................TGTCCAGGCTGGAGTGCAGTGACGATC...........................................271.000.00--1.00--------------------------------------------------
..............................................................................................................................................................................................................ATCTCAGCTCACTGCAGCCTCCACCCCCCAG.............3111.001.00----1.00------------------------------------------------
....................................................................................................................................................................................TGTCCAGGCTGGAGTGCAGTGAAAGA............................................2601.006.00-1.00---------------------------------------------------
..............................................................................................................................................................................................................ATCTCAGCTCACTGCAGCCTCCACCCCCCAGGT...........3311.001.001.00----------------------------------------------------
....................................................................................................................................................................................TGTCCAGGCTGGAGTGCAGTGACTG.............................................251.000.00-----------------------------------1.00-----------------
...............................................................................................................................................................................TCTGTTGTCCAGGCTGGAGTGCTCTG.................................................261.000.00--------------------------------------1.00--------------
...................................................................................................................................................................................................................AGCTCACTGCAGCCTCCACCCAGGT..............251.000.001.00----------------------------------------------------
.......................GCATGGTGAATGAGAGCTCTCTGACAG........................................................................................................................................................................................................2711.001.00--------1.00--------------------------------------------
.....................................................................................................................................................................................................................CTCACTGCAGCCTCCACCCCCAGGC............251.000.001.00----------------------------------------------------
..........................................................................................................................................................................................................................TGCAGCCTCCACCCCCCAGGTTCAGG......261.000.001.00----------------------------------------------------
....................................................................................................................................................................................TGTCCAGGCTGGAGTGCAGTACCA..............................................241.000.001.00----------------------------------------------------
...................................................................................................................................................................................TTGTCCAGGCTGGAGTGCAGTGCGC..............................................251.000.001.00----------------------------------------------------
......................TGCATGGTGAATGAGAGCTCTCTGACAG........................................................................................................................................................................................................2811.001.00-------------------1.00---------------------------------
.............................................................................................................................................................................................................GATCTCAGCTCACTGCAGCCTAAT.....................241.000.00-------------------------------1.00---------------------
...................................................................................................................................................................................................................AGCTCACTGCAGCCTCCACCCCCCAGGTTCCAG......331.000.001.00----------------------------------------------------
...................................................................................................................................................................................TTGTCCAGGCTGGAGTGCAGGACG...............................................241.000.001.00----------------------------------------------------
...................................................................................................................................................................................................................AGCTCACTGCAGCCTCCACCCTGGT..............251.000.001.00----------------------------------------------------
................................ATGAGAGCTCTCTGACAG........................................................................................................................................................................................................1820.500.50----------------------------------------------0.50------
..................................GAGAGCTCTCTGACAG........................................................................................................................................................................................................1630.330.33-------0.33---------------------------------------------
..................................GAGAGCTCTCTGACAGG.......................................................................................................................................................................................................1730.330.33-----------------------------------------------0.33-----
.............................................................................TTCCTTCCTCCCCTGCCA...........................................................................................................................................................1830.330.33-------------------------------------------------0.33---
........................................................................................................................................................................................................................ACTGCAGCCTCCACCCCCCAGGTTC.........2570.140.14--0.14--------------------------------------------------
......................................................................................................................................................................................................................TCACTGCAGCCTCCACCCCCCAGGTT..........2670.140.14--0.14--------------------------------------------------

Antisense strand
TGCCGCCCTGGTGGCCGGCGAGTGCATGGTGAATGAGAGCTCTCTGACAGGTGAGCCCCCAGCCCCTGGCCTGCAGCTTCCTTCCTCCCCTGCCATCCAACCCTTTGCCCTGCGGCAAAAGTTTTCATTTGAGTTTCCTTTTCCTTTTTTGTTTTTTTGTGAGACGGAGTTTCACTCTGTTGTCCAGGCTGGAGTGCAGTGACATGATCTCAGCTCACTGCAGCCTCCACCCCCCAGGTTCAAGTGATTC
.....................................................................................................................................................((((...((((..(((((((.....))))))).(((.....)))..)))).))))..............................................
......................................................................................................................................135......................................................................208........................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR037938(GSM510476)
293Red. (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR189784DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189786SRR343334SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
TAX577588(Rovira)
total RNA. (breast)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR189787DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR040011(GSM532896)
G529T. (cervix)
SRR191610(GSM715720)
195genomic small RNA (size selected RNA from . (breast)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
SRR390723(GSM850202)
total small RNA. (cell line)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR343335SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040032(GSM532917)
G603N. (cervix)
GSM532885(GSM532885)
G850N. (cervix)
SRR343336SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
...............................................................................................................................................................................TCTGTTGTCCAGGCTGGAGTGCACGGG................................................ 273.000.003.00----------------------------------------------------
..........................................................................................................................................................................................................CATGATCTCAGCTCACTGCAGCCTCCAAG................... 292.000.00--2.00--------------------------------------------------
...............................................................................................................................................................................TCTGTTGTCCAGGCTGGAGTGCAGTCGGG.............................................. 292.000.001.00-1.00--------------------------------------------------
.................................................................................................................................................................................TGTTGTCCAGGCTGGAGTTAG.................................................... 211.000.00-----------1.00-----------------------------------------
............................................................................................................................................TTCCTTTTTTGTTTTTTTGTT......................................................................................... 211.000.00----------------------------------1.00------------------
......................................................................................................................................TTCCTTTTCCTTTTTTCTCG................................................................................................ 201.000.00------------------------------------------1.00----------
.......................................................................................................................................................................................................................................CCCCAGGTTCAAGTGATAG 191.000.00--------------1.00--------------------------------------
.......................................................................................................................................................................................................................................CCCCAGGTTCAAGTGATAGGG 211.000.00--1.00--------------------------------------------------
.....................................................................................................................................................................GGAGTTTCACTCTGTTGAA.................................................................. 191.000.00-------------1.00---------------------------------------
..........................................................................................................................................................................................GGCTGGAGTGCAGTGACATGATCGGC...................................... 261.000.00--1.00--------------------------------------------------
.........................................................................................................................................................................................................................CTGCAGCCTCCACCCCCCAGCG........... 221.000.001.00----------------------------------------------------
.....................................................................................................................................................................................................................CTCACTGCAGCCTCCACCCCCGC.............. 231.000.00--1.00--------------------------------------------------
...............................................................................................................................................................................................................................CCTCCACCCCCCAGGTTCAAAGG.... 231.000.00--1.00--------------------------------------------------
.....................................................................................TCCCCTGCCATCCAATGGG.................................................................................................................................................. 191.000.00--1.00--------------------------------------------------
.................................................................................................................................................................................TGTTGTCCAGGCTGGAGTA...................................................... 191.000.00---------------------------------------1.00-------------
...............................................................................................................................................................................................................TCTCAGCTCACTGCAGCCTCCACCCCCCAC............. 301.000.00--1.00--------------------------------------------------
............................................................................................................................................................................................................................CAGCCTCCACCCCCCGTG............ 181.000.00-----------------------------1.00-----------------------
..................................................................................................AACCCTTTGCCCTGCGGCAATGA................................................................................................................................. 231.000.00----------------------1.00------------------------------
.........................................................CCCAGCCCCTGGCCTGTGAC............................................................................................................................................................................. 201.000.00-----------------------------------------1.00-----------
..........................................................................................................................................................................................GGCTGGAGTGCAGTGACATGATGAGC...................................... 261.000.00--1.00--------------------------------------------------
..................................................................................................................................................................................GTTGTCCAGGCTGGAGTGCAGTGTCT.............................................. 261.000.00-------1.00---------------------------------------------
.............................................................................................................................................................................................................TGGGGGGTGGAGGCTGCAGTGAGCTGAGATC.............. 3120.500.50--0.50--------------------------------------------------
..................................................................................................................................................................................................................TGGGGGGTGGAGGCTGCAGTGAGCTG.............. 2630.330.33--0.33--------------------------------------------------
.......................................................................................................................................................................................................................TGAACCTGGGGGGTGGAGGCTGCAGTG........ 2770.290.290.14---------------------------------------------------0.14
....................................................................................................................................................................................................................AACCTGGGGGGTGGAGGCTGCAGTGAGC.......... 2860.170.17--0.17--------------------------------------------------
.......................................................................................................................................................................................................................ACCTGGGGGGTGGAGGCTGCAGTG........... 2470.140.14--0.14--------------------------------------------------