ID: uc009voo.1_intron_1_0_chr1_16525750_r.5p
GENE: ARHGEF19(9)
chr1:16528077-16528326-


(2)
AGO2.ip 		(2)
B-CELL 		(1)
BRAIN 		(8)
BREAST 		(8)
CELL-LINE 		(3)
CERVIX 		(1)
FIBROBLAST 		(1)
HEART 		(1)
OTHER 		(11)
SKIN

Sense strand
GTGCCCCTCCAGCCCCCAGGAGGACAAGGAGGTCATCAGTGAGGGGGAAGGTAGTAGCTCATCCCTGCTGCTTACATCCCTGGGCTGGACCCTCGCCCGCTCTCCTCCCCTCCCATCCTGGGTGCTGTGTTGCTGGCAGGGCTATGGGGAGAGAGACCAACTTCTGGGGCAGTCAGGGGTAGCTCTGAGGAACCTTGAAGGCTGGGCAGAACTTACATAGCACAGGTGGACTCTGTGTCCACAGGCAGCA
..................................................((((((((........)))))).))......((((.((...)).))))..........((.(((.....))).((......)).))..................................................................................................................
..................................................51...................................................................................136................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189785SRR189784SRR343336SRR189782SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR343337RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR343334TAX577741(Rovira)
total RNA. (breast)		TAX577589(Rovira)
total RNA. (breast)		TAX577738(Rovira)
total RNA. (breast)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		TAX577746(Rovira)
total RNA. (breast)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR029129(GSM416758)
SW480. (cell line)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040009(GSM532894)
G727T. (cervix)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		TAX577740(Rovira)
total RNA. (breast)		SRR037937(GSM510475)
293cand2. (cell line)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR040006(GSM532891)
G601N. (cervix)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR343335SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		GSM532879(GSM532879)
G659N. (cervix)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		TAX577453(Rovira)
total RNA. (breast)		SRR553574(SRX182780)
source: Heart. (Heart)		TAX577743(Rovira)
total RNA. (breast)		SRR015365(GSM380330)
Memory B cells (MM139). (B cell)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
..................................................................................................................ATCCTGGGTGCTGTGGTT......................................................................................................................1846.000.005.001.006.002.005.004.004.00-3.00-2.002.002.00-1.001.001.001.00--1.00----1.00---1.00-1.00---1.00-1.00-----
..........................................................TCATCCCTGCTGCTTCCTC.............................................................................................................................................................................196.000.00-3.00-------2.00----------------------1.00----------
................................................................................................................................................................................GGGTAGCTCTGAGGAACCTTGAAGGC................................................2612.002.00-------2.00-----------------------------------
........................................GAGGGGGAAGGTAGTATAG...............................................................................................................................................................................................191.000.00---1.00---------------------------------------
............................................................................................................................................................................................GGAACCTTGAAGGCTGGGGCTG........................................221.000.00-------------1.00-----------------------------
..................................................................................................................................TGCTGGCAGGGCTATCCCC.....................................................................................................191.000.00---------------------------1.00---------------
..................................................................................................................ATCCTGGGTGCTGTGGTTA.....................................................................................................................191.000.00---------------------1.00---------------------
................................................................................................................................................................................GGGTAGCTCTGAGGAACCTTGAAGGCT...............................................2711.001.00------------------------1.00------------------
.......................................TGAGGGGGAAGGTAGTTTAG...............................................................................................................................................................................................201.000.00---1.00---------------------------------------
.................................................................................................................CATCCTGGGTGCTGTGTTGCTGGC.................................................................................................................2411.001.00-------1.00-----------------------------------
..................................................................................................................ATCCTGGGTGCTGTGTTT......................................................................................................................181.000.001.00------------------------------------------
.......................................TGAGGGGGAAGGTAGTATAG...............................................................................................................................................................................................201.000.00---1.00---------------------------------------
.................AGGAGGACAAGGAGGTCGA......................................................................................................................................................................................................................191.000.00-------------------1.00-----------------------
.........................................AGGGGGAAGGTAGTATAG...............................................................................................................................................................................................181.000.00-1.00-----------------------------------------
...........................................................................................................................................................................................AGGAACCTTGAAGGCTGG.............................................1811.001.00------------------------------1.00------------
........................................................................................ACCCTCGCCCGCTCTCCA................................................................................................................................................181.000.00----------------------------------1.00--------
............................................GGGAAGGTAGTAGCTCTG............................................................................................................................................................................................181.000.00--------------------------1.00----------------
.....................................................................................................................................................................................GCTCTGAGGAACCTTGAAGGCTGG.............................................2411.001.00------------------1.00------------------------
.......................................TGAGGGGGAAGGTAGTATAT...............................................................................................................................................................................................201.000.00--------------------------------------1.00----
..................................................................................................................ATCCTGGGTGCTGTGGTA......................................................................................................................181.000.001.00------------------------------------------
................................................................................................................CCATCCTGGGTGCTGTAGGC......................................................................................................................201.000.00----------------------------1.00--------------
.....................................................................................................................CTGGGTGCTGTGTTGTCTG..................................................................................................................191.000.00-1.00-----------------------------------------
....................................CAGTGAGGGGGAAGGACA....................................................................................................................................................................................................181.000.00-----------------------1.00-------------------
..........................................GGGGGAAGGTAGTAG.................................................................................................................................................................................................1550.200.20----------------------------------------0.20--
................................................................................................................................................................................GGGTAGCTCTGAGGA...........................................................1570.140.14----------------------------------------0.14--
......................................GTGAGGGGGAAGGTAG....................................................................................................................................................................................................1670.140.14------------------------------------------0.14
...............................................................................................................................................................................GGGGTAGCTCTGAGG............................................................1570.140.14-----------------------------------------0.14-

Antisense strand
GTGCCCCTCCAGCCCCCAGGAGGACAAGGAGGTCATCAGTGAGGGGGAAGGTAGTAGCTCATCCCTGCTGCTTACATCCCTGGGCTGGACCCTCGCCCGCTCTCCTCCCCTCCCATCCTGGGTGCTGTGTTGCTGGCAGGGCTATGGGGAGAGAGACCAACTTCTGGGGCAGTCAGGGGTAGCTCTGAGGAACCTTGAAGGCTGGGCAGAACTTACATAGCACAGGTGGACTCTGTGTCCACAGGCAGCA
..................................................((((((((........)))))).))......((((.((...)).))))..........((.(((.....))).((......)).))..................................................................................................................
..................................................51...................................................................................136................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189785SRR189784SRR343336SRR189782SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR343337RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR343334TAX577741(Rovira)
total RNA. (breast)		TAX577589(Rovira)
total RNA. (breast)		TAX577738(Rovira)
total RNA. (breast)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		TAX577746(Rovira)
total RNA. (breast)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR029129(GSM416758)
SW480. (cell line)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040009(GSM532894)
G727T. (cervix)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		TAX577740(Rovira)
total RNA. (breast)		SRR037937(GSM510475)
293cand2. (cell line)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR040006(GSM532891)
G601N. (cervix)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR343335SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		GSM532879(GSM532879)
G659N. (cervix)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		TAX577453(Rovira)
total RNA. (breast)		SRR553574(SRX182780)
source: Heart. (Heart)		TAX577743(Rovira)
total RNA. (breast)		SRR015365(GSM380330)
Memory B cells (MM139). (B cell)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
............................................................................................................................................................................................GGAACCTTGAAGGCTCAA............................................ 181.000.00----------------------1.00--------------------
.................................................................................................CGCTCTCCTCCCCTCCCTTCT.................................................................................................................................... 211.000.00---------------------------------1.00---------
..GCCCCTCCAGCCCCCCCA...................................................................................................................................................................................................................................... 181.000.00------------------------------------1.00------
...............................................................................................GAGGGGAGGAGAGCGGG.......................................................................................................................................... 1720.500.50---------------------------------------0.50---