ID: uc009vjw.2_intron_2_0_chr1_1154324_r.5p
GENE: (4)
chr1:1158424-1158673-


(1)
AGO2.ip 		(1)
B-CELL 		(3)
BRAIN 		(2)
BREAST 		(7)
CELL-LINE 		(4)
HEART 		(1)
HELA 		(3)
LIVER 		(4)
OTHER 		(9)
SKIN 		(1)
TESTES 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
GGTTGCCGACGCCATCAGGCTCAACGAGGAACTCAAAGTGGATGAGGAAAGTGAGTGCTCAGCCAGGCTCCCGCCACCGGTCTCAGGCATCCTGTGTGTGCGCGCGTGTGTTGTGTGTACATGAGTGTGCCGTGTGTGTCGTGTATGAGTGTGCCGTGCGTGTGCTCGTGAGTACGTGTGTGCGTGCCGTGTGTACGAGTGTGCTGTGCGCGTGCTCGTGAGTACGTGTGTGCATGTTGTGTGTACGTGT
.......................................................................(((.(((((...((((((..((.((((((((((((.....))))))))))))))..)))).))....))).))....)))...................................................................................................
......................................................................71...............................................................................152................................................................................................
SizePerfect hitTotal NormPerfect NormSRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR343336SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR189782TAX577740(Rovira)
total RNA. (breast)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR343335SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
..................................................................................................................................CGTGTGTGTCGTGTAGGG......................................................................................................1877.000.0077.00-----------------------------------
.................................................................................................................................CCGTGTGTGTCGTGTAGGG......................................................................................................1912.000.0012.00-----------------------------------
....................TCAACGAGGAACTCAAAG....................................................................................................................................................................................................................1815.005.00---5.00--------------------------------
.....................CAACGAGGAACTCAAAGTGGAC...............................................................................................................................................................................................................2215.004.00-4.00-----------1.00----------------------
.....................CAACGAGGAACTCAAAGTGGA................................................................................................................................................................................................................2114.004.00-1.00------2.00-----------------------1.00---
...........................................................................ACCGGTCTCAGGCATCCTGT...........................................................................................................................................................2012.002.00---------2.00--------------------------
......................AACGAGGAACTCAAAGTGGACGA.............................................................................................................................................................................................................2312.002.00-----2.00------------------------------
......................AACGAGGAACTCAAAGTGGACGAG............................................................................................................................................................................................................2412.002.00------------------------1.00----1.00------
................AGGCTCAACGAGGAACTCAAAGTGGAC...............................................................................................................................................................................................................2712.001.00--------------1.00------1.00--------------
..................GCTCAACGAGGAACTCAAAGTGGAC...............................................................................................................................................................................................................252.000.00-------2.00----------------------------
.....................CAACGAGGAACTCAAAGTGGACGA.............................................................................................................................................................................................................2412.004.00---------------------------1.00-----1.00--
......................AACGAGGAACTCAAAGTGGA................................................................................................................................................................................................................2012.002.00--2.00---------------------------------
.......................ACGAGGAACTCAAAGTGGA................................................................................................................................................................................................................1912.002.00-1.001.00---------------------------------
.......GACGCCATCAGGCTCAACGA...............................................................................................................................................................................................................................2011.001.00-1.00----------------------------------
...........CCATCAGGCTCAACGAGGA............................................................................................................................................................................................................................1911.001.00--1.00---------------------------------
........................CGAGGAACTCAAAGTGGACGA.............................................................................................................................................................................................................2111.001.00----------1.00-------------------------
......CGACGCCATCAGGCTCAACGAG..............................................................................................................................................................................................................................2211.001.00-1.00----------------------------------
.....................CAACGAGGAACTCAAAGTGGATGA.............................................................................................................................................................................................................2411.001.00------------------1.00-----------------
....................TCAACGAGGAACTCAAAGTGGA................................................................................................................................................................................................................2211.001.00-------------1.00----------------------
....................................................................................AGGCATCCTGTGTGTGCGCGCGTGTG............................................................................................................................................2611.001.00-------------------------1.00----------
....................................................................................................CGCGCGTGTGTTGTGCT.....................................................................................................................................1721.000.50-----------------------1.00------------
...................CTCAACGAGGAACTCAAAGTGGACGAG............................................................................................................................................................................................................271.000.00-------------------------------1.00----
.......................ACGAGGAACTCAAAGTGGATGAGGAAA........................................................................................................................................................................................................2711.001.00------------1.00-----------------------
...TGCCGACGCCATCAG........................................................................................................................................................................................................................................1511.001.00-----------------1.00------------------
...........CCATCAGGCTCAACGAGG.............................................................................................................................................................................................................................1811.001.00--1.00---------------------------------
.................GGCTCAACGAGGAACTCAAAGTGG.................................................................................................................................................................................................................2411.001.00----------------------------1.00-------
...........CCATCAGGCTCAACGAGGAACTCAAAG....................................................................................................................................................................................................................2711.001.00-----------1.00------------------------
.......................ACGAGGAACTCAAAGTGGACGAG............................................................................................................................................................................................................2311.002.00-------------------1.00----------------
....................................................................................................CGCGCGTGTGTTGTGCGTC...................................................................................................................................1921.000.50------1.00-----------------------------
.......................ACGAGGAACTCAAAGTGGAT...............................................................................................................................................................................................................2011.001.00----1.00-------------------------------
............CATCAGGCTCAACGAGGA............................................................................................................................................................................................................................1811.001.00-1.00----------------------------------
.........................GAGGAACTCAAAGTGGACGA.............................................................................................................................................................................................................201.000.00----------1.00-------------------------
........................CGAGGAACTCAAAGTGGA................................................................................................................................................................................................................1811.001.00-----1.00------------------------------
........................CGAGGAACTCAAAGTGGACGAG............................................................................................................................................................................................................2211.001.00------------------------------1.00-----
................AGGCTCAACGAGGAACTCAAAGTGGA................................................................................................................................................................................................................2611.001.00----------------1.00-------------------
...................CTCAACGAGGAACTCAAAGTG..................................................................................................................................................................................................................2111.001.00----1.00-------------------------------
..........................AGGAACTCAAAGTGGATGAGGAAACACA....................................................................................................................................................................................................281.000.00----1.00-------------------------------
...........CCATCAGGCTCAACGAGGTGAC.........................................................................................................................................................................................................................2211.001.00-1.00----------------------------------
................AGGCTCAACGAGGAACTCAAAGTGGATGAGGAAACA......................................................................................................................................................................................................361.000.00------1.00-----------------------------
..............TCAGGCTCAACGAGGAAC..........................................................................................................................................................................................................................1811.001.00--1.00---------------------------------
....................TCAACGAGGAACTCAAAGTGGATGAGGAA.........................................................................................................................................................................................................2911.001.00------------1.00-----------------------
.............................AACTCAAAGTGGATGGC............................................................................................................................................................................................................171.000.00--------------------------1.00---------
..................GCTCAACGAGGAACTCAAAGTGGACGA.............................................................................................................................................................................................................271.000.00-----------1.00------------------------
.......................ACGAGGAACTCAAAGTCGAC...............................................................................................................................................................................................................201.000.00----------------------1.00-------------
....................TCAACGAGGAACTCAAAGTGGAC...............................................................................................................................................................................................................2311.001.00--1.00---------------------------------
.............ATCAGGCTCAACGAGGAACTCAAAGTGGAT...............................................................................................................................................................................................................3011.001.00--------------------1.00---------------
.......................ACGAGGAACTCAAAGTG..................................................................................................................................................................................................................1720.500.50----------------------------------0.50-
....................................................................................................CGCGCGTGTGTTGTG.......................................................................................................................................1520.500.50-----------------------------------0.50

Antisense strand
GGTTGCCGACGCCATCAGGCTCAACGAGGAACTCAAAGTGGATGAGGAAAGTGAGTGCTCAGCCAGGCTCCCGCCACCGGTCTCAGGCATCCTGTGTGTGCGCGCGTGTGTTGTGTGTACATGAGTGTGCCGTGTGTGTCGTGTATGAGTGTGCCGTGCGTGTGCTCGTGAGTACGTGTGTGCGTGCCGTGTGTACGAGTGTGCTGTGCGCGTGCTCGTGAGTACGTGTGTGCATGTTGTGTGTACGTGT
.......................................................................(((.(((((...((((((..((.((((((((((((.....))))))))))))))..)))).))....))).))....)))...................................................................................................
......................................................................71...............................................................................152................................................................................................
SizePerfect hitTotal NormPerfect NormSRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR343336SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR189782TAX577740(Rovira)
total RNA. (breast)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR343335SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
...................................AAGTGGATGAGGAAAGAATA................................................................................................................................................................................................... 201.000.00---------------1.00--------------------