ID: uc009viq.2_intron_0_0_chr1_14830_r.3p
GENE: (6)
chr1:14780-15029-


(1)
AGO2.ip 		(5)
B-CELL 		(3)
BRAIN 		(13)
BREAST 		(27)
CELL-LINE 		(5)
CERVIX 		(6)
HEART 		(2)
HELA 		(6)
LIVER 		(3)
OTHER 		(1)
RRP40.ip 		(43)
SKIN 		(1)
TESTES 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
CGAGCCAAGGTGGGCACTTGATGTCGGATCTCTTCAACAAGCTGGTCATGAGGCGCAAGGGTAGGAGGCAGGGCCGCTGCCCGCCCTGGGCCAGCACCTTGTAATTCTGTCCTGCCTTTTTCTTCCTGTATTTAAGTCTCCGGGGGCTGGGGGAACCAGGGTTTCCCACCAACCACCCTCACTCAGCCTTTTCCCTCCAGGCATCTCTGGGAAAGGACCTGGGGCTGGTGAGGGGCCCGGAGGAGCCTTT
.........................................................((((.(((.((((((((.(((((((.....)))).))).............)))))))).........................(((((.(((((((((....))).))).))).)).)))........)))...))))......................................................
.........................................................58............................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037935(GSM510473)
293cand3. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040035(GSM532920)
G001T. (cervix)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR207117(GSM721079)
Whole cell RNA. (cell line)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191470(GSM715580)
118genomic small RNA (size selected RNA from . (breast)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR191626(GSM715736)
36genomic small RNA (size selected RNA from t. (breast)		SRR040008(GSM532893)
G727N. (cervix)		TAX577739(Rovira)
total RNA. (breast)		SRR040022(GSM532907)
G575N. (cervix)		SRR191627(GSM715737)
45genomic small RNA (size selected RNA from t. (breast)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		TAX577744(Rovira)
total RNA. (breast)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR191596(GSM715706)
73genomic small RNA (size selected RNA from t. (breast)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR390724(GSM850203)
small rna immunoprecipitated. (cell line)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577746(Rovira)
total RNA. (breast)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037936(GSM510474)
293cand1. (cell line)		SRR191543(GSM715653)
124genomic small RNA (size selected RNA from . (breast)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR040012(GSM532897)
G648N. (cervix)		SRR189786SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)		SRR040010(GSM532895)
G529N. (cervix)		SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)		SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR029125(GSM416754)
U2OS. (cell line)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037933(GSM510471)
293cand4_rep2. (cell line)
.................................................................................................................................................................................CTCACTCAGCCTTTTCCCTCCAGA.................................................24819.002.12-1.00-2.001.001.00--1.001.00------------1.001.001.001.001.001.00--1.00----1.00---------1.001.00--1.00---1.00--------------------------------------------------------------
................................................................................................................................................................................CCTCACTCAGCCTTTTCCCTCCAGA.................................................25813.002.62-----1.002.00-1.001.00----1.00----1.00---------1.00------1.00-1.00---1.00--------1.00--1.00-------------------------------------------------------------
.................................................................................................................................................................................CTCACTCAGCCTTTTCCCTCCAGAA................................................2589.002.12-----------2.00-----1.001.00------------1.00-1.00---1.00----------1.00------1.00------------------------------------------------------------
................................................................................................................................................................................CCTCACTCAGCCTTTTCCCTCCAG..................................................2482.622.62---0.25-----------0.12-0.25--------0.12---0.12--------------------------0.120.500.12--0.25-0.12------0.120.12-----------------0.12---------0.12---0.12-----------
.................................................................................................................................................................................CTCACTCAGCCTTTTCCCTCCAG..................................................2382.122.12----0.12---------0.120.12------0.120.12-0.12---0.12---------------------------0.12-----0.25-------0.12---0.12-----------0.12-0.12-0.12--0.12---------------0.12-----
...............................................................................................................................................................................CCCTCACTCAGCCTTTTCCCTCCAGA.................................................2682.000.50-------1.00--------------------------------1.00---------------------------------------------------------------------------
.................................TCAACAAGCTGGTCATGAGGCGCAAGGGCAT..........................................................................................................................................................................................312.000.00--2.00-----------------------------------------------------------------------------------------------------------------
..........................................TGGTCATGAGGCGCAAGG..............................................................................................................................................................................................1871.291.29------------------0.14-------------------------------------0.71----------------------0.140.14----0.14------------------------------
..................................................................................................................................................................................TCACTCAGCCTTTTCCCTCCAGA.................................................231.000.00----------------------------------------------------1.00---------------------------------------------------------------
................................................................................................................................................................................CCTCACTCAGCCTTTTCCCTCCAGAG................................................2681.002.62----------1.00---------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................ACCCTCACTCAGCCTTTTCCCTCCAGAA................................................281.000.00---------------1.00----------------------------------------------------------------------------------------------------
...................................................................................................................................................................................CACTCAGCCTTTTCCCTCCAGA.................................................221.000.00-------1.00------------------------------------------------------------------------------------------------------------
..............................................CATGAGGCGCAAGGGC............................................................................................................................................................................................161.000.00------------1.00-------------------------------------------------------------------------------------------------------
................................................................................................................................................................................CCTCACTCAGCCTTTTCCCTCCCG..................................................241.000.00--------------------1.00-----------------------------------------------------------------------------------------------
............GGCACTTGATGTCGGCTC............................................................................................................................................................................................................................181.000.00---------------------------------------1.00----------------------------------------------------------------------------
..............................................................AGGAGGCAGGGCCGCCCTG.........................................................................................................................................................................191.000.001.00-------------------------------------------------------------------------------------------------------------------
.............................................TCATGAGGCGCAAGGGCATC.........................................................................................................................................................................................201.000.00--------------------------------1.00-----------------------------------------------------------------------------------
............GGCACTTGATGTCGGATCTCTTT.......................................................................................................................................................................................................................231.000.00----------------------------1.00---------------------------------------------------------------------------------------
................................................................................................................................................................................CCTCACTCAGCCTTTTCCCTCCAGT.................................................2581.002.62-----------------------------------------------1.00--------------------------------------------------------------------
......................................................................................................................................................................................................................GGACCTGGGGCTGGTGTGGG................201.000.00-1.00------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................CTCACTCAGCCTTTTCCCTCCAGAC................................................2581.002.12--------------------------------------------------1.00-----------------------------------------------------------------
.................................................................................................................................................................................CTCACTCAGCCTTTTCCCTCCAA..................................................231.000.00-------------------------------------------1.00------------------------------------------------------------------------
.......................................AGCTGGTCATGAGGCGCAAGGGCACC.........................................................................................................................................................................................261.000.001.00-------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................TCCGGGGGCTGGGGGCCCT.............................................................................................191.000.00-------------1.00------------------------------------------------------------------------------------------------------
.............................CTCTTCAACAAGCTGGTCG..........................................................................................................................................................................................................191.000.00--------------------------------------------1.00-----------------------------------------------------------------------
..................................................................GGCAGGGCCGCTGCCCGCCCTGGGCCAGC...........................................................................................................................................................2911.001.00----------------1.00---------------------------------------------------------------------------------------------------
.................TTGATGTCGGATCTCTTCAACAAGCTG..............................................................................................................................................................................................................2780.500.50-0.38---0.12--------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................CCCTCACTCAGCCTTTTCCCTC.....................................................2280.500.50-------------------------------------------------------------------0.38-----------------------------------0.12------------
...............................................................................................................................................................................CCCTCACTCAGCCTTTTCCCTCCAG..................................................2580.500.50--------------0.25-----------------------------------------------0.12-----------------------0.12-----------------------------
............................................GTCATGAGGCGCAAGG..............................................................................................................................................................................................1680.380.38----------------0.12--------------------------------------------------------0.12-------------------------------0.12----------
...................GATGTCGGATCTCTTCAACAAGCTG..............................................................................................................................................................................................................2580.380.38-0.38------------------------------------------------------------------------------------------------------------------
........................CGGATCTCTTCAACAAGCTGGTCA..........................................................................................................................................................................................................2480.380.38-------------------------------------------------------------0.38------------------------------------------------------
..................TGATGTCGGATCTCTTCAACAAGCT...............................................................................................................................................................................................................2580.380.38------------0.25---0.12---------------------------------------------------------------------------------------------------
.GAGCCAAGGTGGGCACTTGATGTCGGATCT...........................................................................................................................................................................................................................3080.380.38------------------------------------------------------------0.38-------------------------------------------------------
......AAGGTGGGCACTTGATGTCGGATCTCTT........................................................................................................................................................................................................................2880.380.38------------------------------------------------------------------0.38-------------------------------------------------
..............CACTTGATGTCGGATC............................................................................................................................................................................................................................1680.380.38-----------------------------------------------------------------0.38--------------------------------------------------
...........................................................................................................................................................................................................................TGGGGCTGGTGAGGGGCCCGGAGGAGCC...2870.290.29--------------------------------------------------------------------0.29-----------------------------------------------
.................TTGATGTCGGATCTCTTCAACAAGCTGG.............................................................................................................................................................................................................2880.250.25----------------------------------------------------------------0.25---------------------------------------------------
........................CGGATCTCTTCAACAAGCTGGTC...........................................................................................................................................................................................................2380.250.25---------------------------------------------------------------------------------------------0.12-0.12--------------------
......................GTCGGATCTCTTCAACAAGCT...............................................................................................................................................................................................................2180.250.25---------------------------------------------------------0.25----------------------------------------------------------
............................................................GTAGGAGGCAGGGCCGCTGCCCGCCCTGGGCC..............................................................................................................................................................3240.250.25----------------------------------------------------------------------0.25---------------------------------------------
........................CGGATCTCTTCAACAAGCTG..............................................................................................................................................................................................................2080.250.25------------------------0.12--------------------------------------------------------------------------0.12----------------
.................TTGATGTCGGATCTCTTCAACAAGC................................................................................................................................................................................................................2580.250.25------------0.25-------------------------------------------------------------------------------------------------------
.............................................................................................................................................GGGGGCTGGGGGAACCAGGGTTTCCCACCAACC............................................................................3350.200.20----------------------------------------------------------------------------0.20---------------------------------------
......................................................................................................................................AGTCTCCGGGGGCTGGGGGAACCAG...........................................................................................2550.200.200.20-------------------------------------------------------------------------------------------------------------------
...............................................ATGAGGCGCAAGGGTAGG.........................................................................................................................................................................................1870.140.14-0.14------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................CCTGGGGCTGGTGAGGGGCCCGGAGG.......2670.140.14---------------------------------------------------------------------0.14----------------------------------------------
.................................TCAACAAGCTGGTCATGAGGCGC..................................................................................................................................................................................................2370.140.14------------------------------------------------------------------------------0.14-------------------------------------
..................................CAACAAGCTGGTCATGAGGCGC..................................................................................................................................................................................................2270.140.14-----------------------------------------------------------------------------------0.14--------------------------------
...................................................................................................................................................................................................................AAAGGACCTGGGGCTGGTGAGGGGCCCGG..........2970.140.14------------------------------------------------------------------------------------0.14-------------------------------
....................................................................................................................................................................................................................AAGGACCTGGGGCTGGTGAGGGGCCCG...........2770.140.14--------------0.14-----------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................AGGACCTGGGGCTGGTGAGGGGCCCGGAGG.......3070.140.14-------------0.14------------------------------------------------------------------------------------------------------
................................................TGAGGCGCAAGGGTAGGAGGCAGGGCC...............................................................................................................................................................................2770.140.14--------------------0.14-----------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................GGAAAGGACCTGGGGCTGGTGAGG.................2470.140.14-----------------------------------------------------------0.14--------------------------------------------------------
.............................................TCATGAGGCGCAAGGGTAGGAGGC.....................................................................................................................................................................................2470.140.14-------------0.14------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................AAAGGACCTGGGGCTGGTGAGGGGCCCGGAGGA......3370.140.14-------------------0.14------------------------------------------------------------------------------------------------
.......................................AGCTGGTCATGAGGCGCAAGGGTAGGA........................................................................................................................................................................................2770.140.14----------------------------------------------------------------------------------0.14---------------------------------
......................................................................................................................................................................................................................................AGGGGCCCGGAGGAGCC...1770.140.14-------------0.14------------------------------------------------------------------------------------------------------
...............................................................................................................................................................GGTTTCCCACCAACCACCCTCACTCA.................................................................2670.140.14---------------------------------------------------------------------------------0.14----------------------------------
.......................TCGGATCTCTTCAACAAGCTGG.............................................................................................................................................................................................................2280.120.12----------------------------0.12---------------------------------------------------------------------------------------
.................TTGATGTCGGATCTCTTCAACAAGCTGGTC...........................................................................................................................................................................................................3080.120.12------------0.12-------------------------------------------------------------------------------------------------------
..........TGGGCACTTGATGTCGGATCTCT.........................................................................................................................................................................................................................2380.120.12-----------------------------------------------------------------------------------------------------0.12--------------
.............................................................................................................................................................................................................TCTGGGAAAGGACCTGGGGCTGGTGA...................2680.120.12------------------------------------------------------------------------------------------------------0.12-------------
.GAGCCAAGGTGGGCACTTGATGTCGGATC............................................................................................................................................................................................................................2980.120.12-------------0.12------------------------------------------------------------------------------------------------------
.......AGGTGGGCACTTGATGTCGGATC............................................................................................................................................................................................................................2380.120.12----------------------------------------------------------------------------------------------------------0.12---------
.......................TCGGATCTCTTCAACAAGC................................................................................................................................................................................................................1980.120.12--------------------------------------------------------------------------0.12-----------------------------------------
..................TGATGTCGGATCTCTTCAACAAGCTG..............................................................................................................................................................................................................2680.120.12------------0.12-------------------------------------------------------------------------------------------------------
.......................TCGGATCTCTTCAACAAGCTG..............................................................................................................................................................................................................2180.120.12-----------------------------------------------------------0.12--------------------------------------------------------
...................GATGTCGGATCTCTTCAACAAGCTGGT............................................................................................................................................................................................................2780.120.12--0.12-----------------------------------------------------------------------------------------------------------------
.GAGCCAAGGTGGGCACTTGATGTCGG...............................................................................................................................................................................................................................2680.120.12----0.12---------------------------------------------------------------------------------------------------------------
....................ATGTCGGATCTCTTCAACAAG.................................................................................................................................................................................................................2180.120.12-------------------------------------------------------------------------------------------------0.12------------------
........................CGGATCTCTTCAACAAGC................................................................................................................................................................................................................1880.120.12--------------------------------------------------------------------------------------------------0.12-----------------
...........GGGCACTTGATGTCGGAT.............................................................................................................................................................................................................................1880.120.12--------------------------------------------------------------------------------------------0.12-----------------------
...GCCAAGGTGGGCACTTGATGTCGGAT.............................................................................................................................................................................................................................2680.120.12---------------------------------------------------------------0.12----------------------------------------------------
....................................................................................................................................................................................................CCAGGCATCTCTGGGAAAGGACCT..............................2480.120.12---------------------------0.12----------------------------------------------------------------------------------------
........GGTGGGCACTTGATGTCG................................................................................................................................................................................................................................1880.120.12-------------------------------0.12------------------------------------------------------------------------------------
....CCAAGGTGGGCACTTGATGTCGGAT.............................................................................................................................................................................................................................2580.120.12---------------------------------------------------------------------------0.12----------------------------------------
...................GATGTCGGATCTCTTCAACAAGCTGG.............................................................................................................................................................................................................2680.120.12--0.12-----------------------------------------------------------------------------------------------------------------
.....CAAGGTGGGCACTTGATGTCGGA..............................................................................................................................................................................................................................2380.120.12-----------------------------------------------------------------------------------------------------------0.12--------
......................................................................................................AATTCTGTCCTGCCTTT...................................................................................................................................1780.120.12-------------------------------------------------------------------------0.12------------------------------------------
......................GTCGGATCTCTTCAACAAGCTG..............................................................................................................................................................................................................2280.120.12---------------------------------------------------------------------0.12----------------------------------------------
.....................TGTCGGATCTCTTCAACAAGCTGGTC...........................................................................................................................................................................................................2680.120.12------------0.12-------------------------------------------------------------------------------------------------------
..............................TCTTCAACAAGCTGGTCATGAGGC....................................................................................................................................................................................................2480.120.12------------------------------------------------------------------------------------------------0.12-------------------
..AGCCAAGGTGGGCACTTGATGTCGGA..............................................................................................................................................................................................................................2680.120.12-------------0.12------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................CCCTCACTCAGCCTTTTCC........................................................1980.120.12----------------------------------------------------------------------------------------0.12---------------------------
..AGCCAAGGTGGGCACTTGATG...................................................................................................................................................................................................................................2180.120.12------------------------------------------------------------------------------------------------------------0.12-------
..............................................................................................................................................................................................................CTGGGAAAGGACCTGGGG..........................1890.110.11-----------------------------------------------------------------------------------------------------------------0.11--
.....................................................................................................................................................................................................................AGGACCTGGGGCTGGTGA...................1890.110.11-------------0.11------------------------------------------------------------------------------------------------------
.....................................................CGCAAGGGTAGGAGGCAGGGC................................................................................................................................................................................2190.110.11------------------------------------------------------------------------------------------------------------------0.11-
.....................................................CGCAAGGGTAGGAGGC.....................................................................................................................................................................................1690.110.11---------------------------------------------------------------------------------------------------------------0.11----
................................................................................................................................................................................................................GGGAAAGGACCTGGGGCT........................1890.110.11----------------------------------------------------------------------------------------------------------------0.11---

Antisense strand
CGAGCCAAGGTGGGCACTTGATGTCGGATCTCTTCAACAAGCTGGTCATGAGGCGCAAGGGTAGGAGGCAGGGCCGCTGCCCGCCCTGGGCCAGCACCTTGTAATTCTGTCCTGCCTTTTTCTTCCTGTATTTAAGTCTCCGGGGGCTGGGGGAACCAGGGTTTCCCACCAACCACCCTCACTCAGCCTTTTCCCTCCAGGCATCTCTGGGAAAGGACCTGGGGCTGGTGAGGGGCCCGGAGGAGCCTTT
.........................................................((((.(((.((((((((.(((((((.....)))).))).............)))))))).........................(((((.(((((((((....))).))).))).)).)))........)))...))))......................................................
.........................................................58............................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037935(GSM510473)
293cand3. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040035(GSM532920)
G001T. (cervix)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR207117(GSM721079)
Whole cell RNA. (cell line)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191470(GSM715580)
118genomic small RNA (size selected RNA from . (breast)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR191626(GSM715736)
36genomic small RNA (size selected RNA from t. (breast)		SRR040008(GSM532893)
G727N. (cervix)		TAX577739(Rovira)
total RNA. (breast)		SRR040022(GSM532907)
G575N. (cervix)		SRR191627(GSM715737)
45genomic small RNA (size selected RNA from t. (breast)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		TAX577744(Rovira)
total RNA. (breast)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR191596(GSM715706)
73genomic small RNA (size selected RNA from t. (breast)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR390724(GSM850203)
small rna immunoprecipitated. (cell line)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577746(Rovira)
total RNA. (breast)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037936(GSM510474)
293cand1. (cell line)		SRR191543(GSM715653)
124genomic small RNA (size selected RNA from . (breast)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR040012(GSM532897)
G648N. (cervix)		SRR189786SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)		SRR040010(GSM532895)
G529N. (cervix)		SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)		SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR029125(GSM416754)
U2OS. (cell line)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037933(GSM510471)
293cand4_rep2. (cell line)
..................................................................................................................CCTTTTTCTTCCTGTGTGC..................................................................................................................... 191.000.00---------------------1.00----------------------------------------------------------------------------------------------
...........................................................................................CAGCACCTTGTAATTCATG............................................................................................................................................ 191.000.00----1.00---------------------------------------------------------------------------------------------------------------
...............................................................................................................................................GGGCTGGGGGAACCAGGGG........................................................................................ 191.000.001.00-------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................TCACTCAGCCTTTTCCCAGC.................................................... 201.000.00----------------------------------1.00---------------------------------------------------------------------------------
...........................................................................................CAGCACCTTGTAATTCA.............................................................................................................................................. 171.000.00----------1.00---------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................TCACTCAGCCTTTTCCCAGCA................................................... 211.000.00-----------------------------------------1.00--------------------------------------------------------------------------
.......................................................................................ACAAGGTGCTGGCCC.................................................................................................................................................... 1560.170.17-----------------------------------------------------------------------------0.17--------------------------------------
..............................................................................................................................CCCGGAGACTTAAATACA.......................................................................................................... 1870.140.14---------------------0.14----------------------------------------------------------------------------------------------
.........................................................................................................AAATACAGGAAGAAAAAGGCAGGACAGA..................................................................................................................... 2880.120.12-------------------------------------------------------------------------------------------------------------0.12------
......TCCGACATCAAGTGCCCACCTT.............................................................................................................................................................................................................................. 2280.120.12------------------------------------------------------------------------0.12-------------------------------------------
..........................................................................................................CAGGAAGAAAAAGGCAGGACAG.......................................................................................................................... 2280.120.12--------------------------------------------------------------------------0.12-----------------------------------------
.........................................................................................................AGAAAAAGGCAGGACAGA............................................................................................................................... 1890.110.11-------------------------------------------------------------------------------------------------------------------0.11