ID: uc004fps.3_intron_1_0_chrY_2111272_r.3p
GENE: (5)
chrY:2111222-2111471-


(3)
BRAIN 		(10)
BREAST 		(2)
CELL-LINE 		(14)
CERVIX 		(3)
HEART 		(2)
LIVER 		(4)
OTHER 		(10)
SKIN 		(2)
UTERUS

Sense strand
TGAGTTTATAATAAAAAGGTGAACTAGAAAAATCCACACGCGTTGGAAAACTGGCCAACAGATGGCATGATCACACATGGGTCTAGGGGAGGTGGCTGCGTATAGACGTGGCCGTGGCCGCAGGTACAGATGCTGCTGGGATGAAGCACTTAGGCGTGAACGCCGTCAGCCTCTTACACCTTCTCCTGCTTGCCCCACAGTGCCTGCTACTCACCCCACGCAGCCTACGCCCAGAGCAAGCTGGCCCTTG
....................................................................................................................................(((.((((...(((((...(((.((((..((.....))...)))).))).....)))))..)))))))..................................................
..................................................................................................................................131..................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR040018(GSM532903)
G701N. (cervix)		SRR040024(GSM532909)
G613N. (cervix)		SRR040014(GSM532899)
G623N. (cervix)		TAX577580(Rovira)
total RNA. (breast)		TAX577588(Rovira)
total RNA. (breast)		SRR040016(GSM532901)
G645N. (cervix)		SRR040022(GSM532907)
G575N. (cervix)		TAX577742(Rovira)
total RNA. (breast)		SRR040012(GSM532897)
G648N. (cervix)		TAX577744(Rovira)
total RNA. (breast)		SRR189784SRR189787GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577740(Rovira)
total RNA. (breast)		TAX577741(Rovira)
total RNA. (breast)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR040029(GSM532914)
G026T. (cervix)		SRR040037(GSM532922)
G243T. (cervix)		GSM532883(GSM532883)
G871N. (cervix)		SRR040011(GSM532896)
G529T. (cervix)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040036(GSM532921)
G243N. (cervix)		SRR189782SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR189785SRR040008(GSM532893)
G727N. (cervix)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577590(Rovira)
total RNA. (breast)		SRR040006(GSM532891)
G601N. (cervix)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577589(Rovira)
total RNA. (breast)		TAX577738(Rovira)
total RNA. (breast)		SRR038853(GSM458536)
MELB. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577743(Rovira)
total RNA. (breast)		SRR040015(GSM532900)
G623T. (cervix)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
.......................................................................................................................................CTGGGATGAAGCACTGTAG................................................................................................1920.000.003.001.00-1.001.001.001.001.00-1.00------1.001.001.00-----1.001.001.00--1.00--1.00--------1.001.00-------
........................................................................................................................................TGGGATGAAGCACTTTAGC...............................................................................................195.000.00--------2.001.00--1.00------------------------------1.00------
........................................................................................................................................TGGGATGAAGCACTTAGCT...............................................................................................1924.000.50--1.00--1.00--------1.00--------------------1.00--------------
........................................................................................................................................TGGGATGAAGCACTTAGCTC..............................................................................................2024.000.501.00------2.00-------------------------------1.00----------
........................................................................................................................................TGGGATGAAGCACTTTAG................................................................................................183.000.00------1.00---------------1.00--------1.00------------------
.......................................................................................................................................CTGGGATGAAGCACTGT..................................................................................................173.000.00---1.00--------1.00------1.00------------------------------
........................................................................................................................................TGGGATGAAGCACTTTTG................................................................................................182.000.001.00-----1.00-------------------------------------------
........................................................................................................................................TGGGATGAAGCACTTAGCTCT.............................................................................................2122.000.50----1.00-----------------------------------1.00---------
...........................................................................................................................................................................TCTTACACCTTCTCCTGCCTGT.........................................................221.000.00-----------1.00--------------------------------------
.......................................................................................................................................CTGGGATGAAGCACTGTCG................................................................................................191.000.00--------1.00-----------------------------------------
........................................................................................................................................TGGGATGAAGCACTTTAGT...............................................................................................191.000.00-1.00------------------------------------------------
........................................................................................................................................TGGGATGAAGCACTTTACC...............................................................................................191.000.00-1.00------------------------------------------------
........................................................................................................................................TGGGATGAAGCACTTTAA................................................................................................181.000.00----------------------------------1.00---------------
........................................................................................................................................TGGGATGAAGCACTTTTAT...............................................................................................191.000.00---------------------------1.00----------------------
.......................................................................................................................................CTGGGATGAAGCACTGTTG................................................................................................191.000.00----1.00---------------------------------------------
...........................................................................................................................................................................TCTTACACCTTCTCCTGCCTGA.........................................................221.000.00-----------1.00--------------------------------------
........................................................................................................................................TGGGATGAAGCACTTTA.................................................................................................171.000.00-------------------------------------1.00------------
........................................................................................................................................TGGGATGAAGCACTTATGCT..............................................................................................201.000.00------------------------------------1.00-------------
........................................................................................................................................TGGGATGAAGCACTTTCAC...............................................................................................191.000.001.00-------------------------------------------------
........................................................................................................................................TGGGATGAAGCACTTTGG................................................................................................181.000.00---------------------------------1.00----------------
.....TTATAATAAAAAGGTGAATATA...............................................................................................................................................................................................................................221.000.00---------------1.00----------------------------------
...........................................................................................................................................................................................................................GCAGCCTACGCCCAGTGG.............181.000.00--------------------------------------1.00-----------
........................................................................................................................................TGGGATGAAGCACTTTTGC...............................................................................................191.000.00-------------1.00------------------------------------
.......................................................................................................................................CTGGGATGAAGCACTGTA.................................................................................................181.000.00---1.00----------------------------------------------
........................................................................................................................................TGGGATGAAGCACTTTTTA...............................................................................................191.000.00-1.00------------------------------------------------
.......................................................................................................................................CTGGGATGAAGCACTTGAGC...............................................................................................201.000.00--1.00-----------------------------------------------
.......................................................................................................................................CTGGGATGAAGCACTTTAG................................................................................................191.000.00----------------------------1.00---------------------
........................................................................................................................................TGGGATGAAGCACTTAAGCT..............................................................................................201.000.00-----1.00--------------------------------------------
.......................................................................................................................................CTGGGATGAAGCACTGAAG................................................................................................191.000.00-------------1.00------------------------------------
........................................................................................................................................TGGGATGAAGCACTTATTCT..............................................................................................201.000.00-1.00------------------------------------------------
...............................................................................................................................AGATGCTGCTGGGATGAAG........................................................................................................1921.001.00---------------1.00----------------------------------
........................................................................................................................................TGGGATGAAGCACTTGTGC...............................................................................................191.000.00--1.00-----------------------------------------------
...........................................................................................................................................................................................................................GCAGCCTACGCCCAGAGCAAGCTGGC.....2620.500.50-------------------------------------------------0.50
........................................................................................................................................TGGGATGAAGCACTTAG.................................................................................................1720.500.50-----------------------------------------------0.50--
.....................................................................................................................................................................................................CAGTGCCTGCTACTCACCCCACG..............................2320.500.50----------------------------------------------0.50---
..........................................................................ACATGGGTCTAGGGGAGGTGGCTG........................................................................................................................................................2420.500.50------------------------------------------------0.50-
.....................................................................................................................................................................................................................CCCCACGCAGCCTACGCC...................1820.500.50-----------------0.50--------------------------------
.................................................................................................................................................................................................................CTCACCCCACGCAGCCTACGCCCAG................2520.500.50----------------0.50---------------------------------

Antisense strand
TGAGTTTATAATAAAAAGGTGAACTAGAAAAATCCACACGCGTTGGAAAACTGGCCAACAGATGGCATGATCACACATGGGTCTAGGGGAGGTGGCTGCGTATAGACGTGGCCGTGGCCGCAGGTACAGATGCTGCTGGGATGAAGCACTTAGGCGTGAACGCCGTCAGCCTCTTACACCTTCTCCTGCTTGCCCCACAGTGCCTGCTACTCACCCCACGCAGCCTACGCCCAGAGCAAGCTGGCCCTTG
....................................................................................................................................(((.((((...(((((...(((.((((..((.....))...)))).))).....)))))..)))))))..................................................
..................................................................................................................................131..................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR040018(GSM532903)
G701N. (cervix)		SRR040024(GSM532909)
G613N. (cervix)		SRR040014(GSM532899)
G623N. (cervix)		TAX577580(Rovira)
total RNA. (breast)		TAX577588(Rovira)
total RNA. (breast)		SRR040016(GSM532901)
G645N. (cervix)		SRR040022(GSM532907)
G575N. (cervix)		TAX577742(Rovira)
total RNA. (breast)		SRR040012(GSM532897)
G648N. (cervix)		TAX577744(Rovira)
total RNA. (breast)		SRR189784SRR189787GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577740(Rovira)
total RNA. (breast)		TAX577741(Rovira)
total RNA. (breast)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR040029(GSM532914)
G026T. (cervix)		SRR040037(GSM532922)
G243T. (cervix)		GSM532883(GSM532883)
G871N. (cervix)		SRR040011(GSM532896)
G529T. (cervix)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040036(GSM532921)
G243N. (cervix)		SRR189782SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR189785SRR040008(GSM532893)
G727N. (cervix)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577590(Rovira)
total RNA. (breast)		SRR040006(GSM532891)
G601N. (cervix)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577589(Rovira)
total RNA. (breast)		TAX577738(Rovira)
total RNA. (breast)		SRR038853(GSM458536)
MELB. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577743(Rovira)
total RNA. (breast)		SRR040015(GSM532900)
G623T. (cervix)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
........................................CGTTGGAAAACTGGCCAATC.............................................................................................................................................................................................. 202.000.00--1.00------------------1.00----------------------------
........................................CGTTGGAAAACTGGCCAAGC.............................................................................................................................................................................................. 201.000.00--------------1.00-----------------------------------
......................................................................................GGGAGGTGGCTGCGTACCG................................................................................................................................................. 191.000.00----------1.00---------------------------------------
.........................................GTTGGAAAACTGGCCCTAT.............................................................................................................................................................................................. 191.000.00--------------------------------------------1.00-----
...GTTTATAATAAAAAGATAG.................................................................................................................................................................................................................................... 191.000.00----------1.00---------------------------------------
.....TTATAATAAAAAGGTCTTA.................................................................................................................................................................................................................................. 191.000.00------------------------------1.00-------------------
.......................................GCGTTGGAAAACTGGCCAT................................................................................................................................................................................................ 191.000.00--------------------1.00-----------------------------
......................................CGCGTTGGAAAACTGGCCGTC............................................................................................................................................................................................... 211.000.00-----------------------1.00--------------------------
........................................CGTTGGAAAACTGGCCAAA............................................................................................................................................................................................... 191.000.00---------1.00----------------------------------------
.........................CGCGTGTGGATTTTTCT................................................................................................................................................................................................................ 1720.500.50---------------------------------------------0.50----