ID: uc004flo.2_intron_1_0_chrX_153714319_r
GENE: (2)
chrX:153714269-153714616-


(1)
AGO2.ip 		(8)
B-CELL 		(19)
BREAST 		(16)
CELL-LINE 		(17)
CERVIX 		(1)
FIBROBLAST 		(7)
HEART 		(1)
HELA 		(2)
LIVER 		(3)
OTHER 		(2)
RRP40.ip 		(39)
SKIN 		(1)
TESTES 		(2)
UTERUS 		(1)
XRN.ip

Sense strand
CGTCCCAGTGCGCCAGCAGCGGCTGCTGTTCAAGGGCAAGGCCCTGGCAGGTACCCAGGGAGAGGAGACGCCCGGGGAGCCCCGCAGGAAGCGGGACCGGGGTGCGCGGGCCGAGGCCAGCAGCCGTGTGTCGGGTCGGGGTGCGGGCGCCAAGCGCCACATGACCCCAAGGGAGGCGGCCGCATGCCTCACAGCCGGATGCCGCAGCGCTCCGCTCCCGCCGCCCGAGGCGGCCTCGCGCCCCGGGCCACCCCCACGGCGGTGGAGGAGGAGGAACCCATCGATCTGTCTTTGGCAGATGGGAAACGACTCTCGGATTATAGCATCGGGCCCAACTCCAAGCTCAAC
.....................................................(((.(((..........))).)))...(((((.....))))).....(((((.((.(((..((((.(((....)))....))))..))).)).))))).....................................................................................................................................................................................................
..................................................51....................................................................................................153.................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		TAX577744(Rovira)
total RNA. (breast)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532877(GSM532877)
G691N. (cervix)		SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		TAX577589(Rovira)
total RNA. (breast)		GSM532879(GSM532879)
G659N. (cervix)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR553574(SRX182780)
source: Heart. (Heart)		TAX577743(Rovira)
total RNA. (breast)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)		TAX577588(Rovira)
total RNA. (breast)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM532884(GSM532884)
G871T. (cervix)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		TAX577579(Rovira)
total RNA. (breast)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		TAX577738(Rovira)
total RNA. (breast)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		GSM532874(GSM532874)
G699T. (cervix)		SRR040007(GSM532892)
G601T. (cervix)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR189784SRR040018(GSM532903)
G701N. (cervix)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577746(Rovira)
total RNA. (breast)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR444041(SRX128889)
Sample 2cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR040036(GSM532921)
G243N. (cervix)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		GSM532881(GSM532881)
G696N. (cervix)		SRR189782SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)		SRR040008(GSM532893)
G727N. (cervix)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		TAX577741(Rovira)
total RNA. (breast)		SRR040025(GSM532910)
G613T. (cervix)		TAX577590(Rovira)
total RNA. (breast)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)		TAX577742(Rovira)
total RNA. (breast)		SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040038(GSM532923)
G531N. (cervix)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR038860(GSM458543)
MM426. (cell line)		SRR191474(GSM715584)
16genomic small RNA (size selected RNA from t. (breast)		SRR040032(GSM532917)
G603N. (cervix)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		SRR191414(GSM715524)
31genomic small RNA (size selected RNA from t. (breast)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		TAX577453(Rovira)
total RNA. (breast)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191584(GSM715694)
98genomic small RNA (size selected RNA from t. (breast)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		TAX577745(Rovira)
total RNA. (breast)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR040027(GSM532912)
G220T. (cervix)		GSM532872(GSM532872)
G652T. (cervix)		SRR040028(GSM532913)
G026N. (cervix)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		GSM532876(GSM532876)
G547T. (cervix)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR444069(SRX128917)
Sample 26cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR444051(SRX128899)
Sample 11cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		SRR343334SRR191419(GSM715529)
41genomic small RNA (size selected RNA from t. (breast)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR040012(GSM532897)
G648N. (cervix)
...................................................................................................................................CGGGTCGGGGTGCGGGGC.......................................................................................................................................................................................................18117.003.00---5.003.001.00--------------2.00--------------1.00-------1.00--------------1.001.00-----1.00-------------------------------------1.00---------------
...........................................................................................................................................................................................................................................................................................................................GATTATAGCATCGGGCCCAACTC..........23112.0012.0012.00----------------------------------------------------------------------------------------------------------------------
...................................................................................................................................CGGGTCGGGGTGCGGGG........................................................................................................................................................................................................17111.003.00----1.00---1.00-1.00---1.00-------------1.00--2.00--1.00---1.00------------------------------1.00-----------------1.00-------------------------------
......................................................................CCCGGGGAGCCCCGCGGGC...................................................................................................................................................................................................................................................................197.000.00--1.00------1.001.001.001.00--1.00---------------------------------------1.00---------------------------------------------------------------
...................................................................................................................................CGGGTCGGGGTGCGG..........................................................................................................................................................................................................1516.006.00--------2.00-----2.00--------------------------------1.00----------------------------------1.00------------------------------------
.........................................................................................................................................................................................................................................................................................................................CGGATTATAGCATCGGG..................1716.006.00-6.00---------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................CGGATTATAGCATCGGGCC................1915.005.00-4.00----------------------------------1.00----------------------------------------------------------------------------------
.....................................................................................................................................GGTCGGGGTGCGGGC........................................................................................................................................................................................................1513.003.00--2.00------------------------------------------------------------------------------1.00-------------------------------------
..................................................................................................................................................................................................................................................CCGGGCCACCCCCACGGCGCG.....................................................................................213.000.00------1.00--------------------1.00------------1.00------------------------------------------------------------------------------
......................................................................................................................................GTCGGGGTGCGGGCGC......................................................................................................................................................................................................1613.003.00--1.00----1.00-----1.00---------------------------------------------------------------------------------------------------------
...................................................................................................................................CGGGTCGGGGTGCGGG.........................................................................................................................................................................................................1613.003.00-----------1.00---------1.00------------------------------------------------------------------------1.00------------------------
.............................................................................................................................GTGTGTCGGGTCGGGGTGCGGGC........................................................................................................................................................................................................2312.002.00---------------------------1.00------------1.00------------------------------------------------------------------------------
......................................................................CCCGGGGAGCCCCGCGCG....................................................................................................................................................................................................................................................................182.000.00-------------------------------------------------------------------------1.00-----------------1.00---------------------------
......................................................................................................................................GTCGGGGTGCGGGCG.......................................................................................................................................................................................................1512.002.00-------1.00-1.00-------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................GGAAACGACTCTCGGCAAC............................1912.001.00-------------1.00-------------------1.00-------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................CGGGCCACCCCCACGGCGCGAC...................................................................................2212.002.00------1.00----------------------------------1.00-----------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................GGCCACCCCCACGGCGCGA....................................................................................192.000.00-----------------------------------------1.00---------------1.00-------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................GGAAACGACTCTCGGCAA.............................1812.001.00--------------------------2.00--------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................CGGGCCACCCCCACGGCG.......................................................................................1812.002.00--------------------------------1.00--------------------------------------------------------------------1.00-----------------
..................................................................................................................................................................................................................................................................................................................................GCATCGGGCCCAACTCCAAGC.....2112.002.00--2.00--------------------------------------------------------------------------------------------------------------------
......................................................................CCCGGGGAGCCCCGCGCGC...................................................................................................................................................................................................................................................................192.000.00----------1.00------1.00-----------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................ATTATAGCATCGGGCCCAACT...........2112.002.00------------------2.00----------------------------------------------------------------------------------------------------
......................................................................................................................................GTCGGGGTGCGGGCGCGA....................................................................................................................................................................................................1812.003.00-----------------2.00-----------------------------------------------------------------------------------------------------
...................................................................................................................................CGGGTCGGGGTGCGGGGCG......................................................................................................................................................................................................1912.003.00-----1.00----------1.00------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................AACGACTCTCGGATTATAGCATCGGG..................2612.002.00---------------------1.00-------1.00-----------------------------------------------------------------------------------------
...................................................................................................................................CGGGTCGGGGTGCGGGGCGG.....................................................................................................................................................................................................2012.003.00----1.00----------------1.00-------------------------------------------------------------------------------------------------
...........................................................................................CGGGACCGGGGTGCGGTGC..............................................................................................................................................................................................................................................192.000.00----1.00-----------------------1.00------------------------------------------------------------------------------------------
...........................................................................................CGGGACCGGGGTGCGG.................................................................................................................................................................................................................................................162.000.00--1.00---------------------1.00----------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................TATAGCATCGGGCCCAACT...........1912.002.00---------------------------------------------2.00-------------------------------------------------------------------------
.....................................................................................................................................................................CCCAAGGGAGGCGGCCGCAT...................................................................................................................................................................2011.001.00----------------------------------------------------------------------------------------1.00------------------------------
......................................................................CCCGGGGAGCCCCGCGGAC...................................................................................................................................................................................................................................................................191.000.00------------1.00----------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................GGAAACGACTCTCGGATTATAGCATCG....................2711.001.00----------------------------------------------1.00------------------------------------------------------------------------
...................................................................................................................................................................................................................................................CGGGCCACCCCCACGGCGCGCC...................................................................................2211.002.00--------------------------------------------------------------------------------1.00--------------------------------------
...................................................................................................................................................................................................................................................CGGGCCACCCCCACGGCGC......................................................................................1911.002.00------------------------------------------------------------------------------1.00----------------------------------------
....................................................................................................................................GGGTCGGGGTGCGGGGCG......................................................................................................................................................................................................1841.000.25--------0.25--------------0.25-------------------------0.25-----------------------------------------------------------0.25---------
......................................................................CCCGGGGAGCCCCGCGGAA...................................................................................................................................................................................................................................................................191.000.00----------------------1.00------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................TAGCATCGGGCCCAACTCCAAGC.....2311.001.00--1.00--------------------------------------------------------------------------------------------------------------------
......................................................................CCCGGGGAGCCCCGCGGC....................................................................................................................................................................................................................................................................181.000.00--------------------------------------------------------------------------------------------1.00--------------------------
...................................................................................................................................CGGGTCGGGGTGCGGCGCG......................................................................................................................................................................................................1911.006.00---------------------------------------------------------------------------1.00-------------------------------------------
................................................................................................................................................................................................................................................................................................................AACGACTCTCGGATT.............................1511.001.00-----------------------------------------------------------------------------------------1.00-----------------------------
...............................................................................................................................................................CATGACCCCAAGGGAGGCG..........................................................................................................................................................................1911.001.00------------------------------------------------------------------1.00----------------------------------------------------
........................................................AGGGAGAGGAGACGCCCGGGGAGC............................................................................................................................................................................................................................................................................2411.001.00----------------------------------------------------1.00------------------------------------------------------------------
...........................................................................................................................................................................................................................GCCGCCCGAGGCGGCGGAG..............................................................................................................191.000.00--------------------------------------------------1.00--------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................CATCGATCTGTCTTTGGCAA..................................................201.000.00-----------------------------------------------------1.00-----------------------------------------------------------------
.................................................................................................................................................................................................................................................................GGCGGTGGAGGAGGAGGCAGT......................................................................211.000.00------------------------------------------------------------------------1.00----------------------------------------------
...............................................................................................................................................................................................................................................................ACGGCGGTGGAGGAGGGA...........................................................................1811.001.00---1.00-------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................CCCCAAGGGAGGCGGC........................................................................................................................................................................1611.001.00----------------------------------1.00------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................CGGATTATAGCATCGGGC.................1811.001.00-----------------------1.00-----------------------------------------------------------------------------------------------
......................................................................................................................................GTCGGGGTGCGGGCGCACG...................................................................................................................................................................................................1911.003.00-------1.00---------------------------------------------------------------------------------------------------------------
........TGCGCCAGCAGCGGCTGCT.................................................................................................................................................................................................................................................................................................................................1911.001.00-----------------------------------------------------------------------------------------------1.00-----------------------
..................GCGGCTGCTGTTCAAAA.........................................................................................................................................................................................................................................................................................................................171.000.00---------------------------------------------------------------1.00-------------------------------------------------------
....................................................................................................GGTGCGCGGGCCGAGGAGC.....................................................................................................................................................................................................................................191.000.00--------------------------------------------------------------------------1.00--------------------------------------------
.........................................................................................................................................................................................................................................................................................................GATGGGAAACGACTCTCG.................................1811.001.00---------------------------------------1.00-------------------------------------------------------------------------------
........................................................................................AAGCGGGACCGGGGTGCGCGGGCCGAGGCCAGC...................................................................................................................................................................................................................................3311.001.00-------------------------------------1.00---------------------------------------------------------------------------------
..........................................................................................................................................................................................................................CGCCGCCCGAGGCGGGA.................................................................................................................171.000.00------1.00----------------------------------------------------------------------------------------------------------------
...................................................................................................................................CGGGTCGGGGTGCGGGGT.......................................................................................................................................................................................................1811.003.00-----------1.00-----------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................GGAAACGACTCTCGG................................1511.001.00-------------1.00---------------------------------------------------------------------------------------------------------
................................AGGGCAAGGCCCTGGCTGAT........................................................................................................................................................................................................................................................................................................201.000.00--1.00--------------------------------------------------------------------------------------------------------------------
........................................................................................................................................CGGGGTGCGGGCGCCTGC..................................................................................................................................................................................................181.000.00----------------1.00------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................CGGATTATAGCATCGTG..................171.000.00-1.00---------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................CCGGGCCACCCCCACGGCGC......................................................................................201.000.00------1.00----------------------------------------------------------------------------------------------------------------
.......................................................................................................................................TCGGGGTGCGGGCGC......................................................................................................................................................................................................1511.001.00-----------------------1.00-----------------------------------------------------------------------------------------------
.....................................................................................................................................GGTCGGGGTGCGGGCGCGACG..................................................................................................................................................................................................211.000.00-------1.00---------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................GGCGGTGGAGGAGGAGAG.........................................................................181.000.00-----------------------------------------------------------------------1.00-----------------------------------------------
.....................................................................................................................................................................................................................................................GGCCACCCCCACGGCGC......................................................................................171.000.00-----1.00-----------------------------------------------------------------------------------------------------------------
......................................................................CCCGGGGAGCCCCGCGGT....................................................................................................................................................................................................................................................................181.000.00---------------------------------------------------------------------------------------------------1.00-------------------
...................................................................................................................................................................................................................................................................................................................GACTCTCGGATTATAGCATCGGG..................2311.001.00---------------------------------------1.00-------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................GGCGGTGGAGGAGGAGGAC........................................................................191.000.00-------------------------------------------------1.00---------------------------------------------------------------------
.......................................................................................................................................TCGGGGTGCGGGCGCGACG..................................................................................................................................................................................................1911.001.00------------------------------------------1.00----------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................CACGGCGGTGGAGGAGGAGG..........................................................................2011.001.00------------------------------1.00----------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................GGAAACGACTCTCGGCA..............................1711.001.00---------------------------------1.00-------------------------------------------------------------------------------------
.........................................................................................................................AGCCGTGTGTCGGGTCGGGGTGCG...........................................................................................................................................................................................................2411.001.00--------------------------------------------------------------------------------------------------1.00--------------------
...................................................................................................................................CGGGTCGGGGTGCGGGACG......................................................................................................................................................................................................1911.003.00--------------------------------------1.00--------------------------------------------------------------------------------
...................CGGCTGCTGTTCAAGGGCAAGGCCCTGGCA...........................................................................................................................................................................................................................................................................................................3011.001.00---------------------------------------------------1.00-------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................ACCCATCGATCTGTCTTTGGCAG..................................................2311.001.00-----------------------------------------------------------------------------1.00-----------------------------------------
............................................................................................GGGACCGGGGTGCGCGC...............................................................................................................................................................................................................................................171.000.00------------------------------------------------------------1.00----------------------------------------------------------
.......................................................................................................................................TCGGGGTGCGGGCGCG.....................................................................................................................................................................................................1611.001.00--1.00--------------------------------------------------------------------------------------------------------------------
...............GCAGCGGCTGCTGTTATTT..........................................................................................................................................................................................................................................................................................................................191.000.00--------------------------------------------------------------------------------------1.00--------------------------------
......................................................................CCCGGGGAGCCCCGCTGGC...................................................................................................................................................................................................................................................................191.000.00--------------------------------------------1.00--------------------------------------------------------------------------
....................................................................................................................................................................................................................................................GGGCCACCCCCACGGCGCGAC...................................................................................2111.001.00------1.00----------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................ATAGCATCGGGCCCAACTCCAAGC.....2411.001.00------------------------1.00----------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................AACGACTCTCGGATTATAGC........................2011.001.00-------------------------------------------------------------------1.00---------------------------------------------------
...................................................................................................................................CGGGTCGGGGTGCGGGGA.......................................................................................................................................................................................................1811.003.00--------------------1.00--------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................GAAACGACTCTCGGATTATAGC........................2211.001.00---------1.00-------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................GGAAACGACTCTCGGATTATAGCATC.....................2611.001.00--------------------------------------------------------------------1.00--------------------------------------------------
...........................................................................................CGGGACCGGGGTGCGGT................................................................................................................................................................................................................................................171.000.00-------------------------------------------------------------1.00---------------------------------------------------------
......................................................................CCCGGGGAGCCCCGCGAG....................................................................................................................................................................................................................................................................181.000.00--------------------------------------------------------------1.00--------------------------------------------------------
...........................................................................................CGGGACCGGGGTGCGGAG...............................................................................................................................................................................................................................................181.000.00------------------------------1.00----------------------------------------------------------------------------------------
........................................................................................................................................CGGGGTGCGGGCGCCGGAT.................................................................................................................................................................................................191.000.00---1.00-------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................CTCGGATTATAGCATCGG...................1811.001.00------------------------------------1.00----------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................CGGGCCACCCCCACGGCGCGA....................................................................................2111.002.00---------------1.00-------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................ACGGCGGTGGAGGAGG.............................................................................1611.001.00-----1.00-----------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................AACGACTCTCGGATTATAGCATCG....................2411.001.00----------------------------------------------------------------------------------------------------1.00------------------
.....................................................................................................................................................................................................................................................GGCCACCCCCACGGCGCGAC...................................................................................201.000.00----------------------1.00------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................GATGGGAAACGACTCTCGGA...............................2011.001.00------------------------------------------------------------------------------------------------------1.00----------------
........................................................................................................................................CGGGGTGCGGGCGCCGTCG.................................................................................................................................................................................................191.000.00------------------1.00----------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................CGGGCCACCCCCACGGCGCG.....................................................................................2011.002.00-----------------------------------------------------------------------------------1.00-----------------------------------
...........................................................................................CGGGACCGGGGTGCGC.................................................................................................................................................................................................................................................1611.001.00------------------------------------------------1.00----------------------------------------------------------------------
......................................................................CCCGGGGAGCCCCGCTGT....................................................................................................................................................................................................................................................................181.000.00--------------------------------------------------------------------------------------------------------1.00--------------
...............................................................................................................................................................................................................................................................ACGGCGGTGGAGGAGCGC...........................................................................181.000.00---1.00-------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................CCGGGCCACCCCCACGGCGCGAC...................................................................................231.000.00----------------------------------------------------------------1.00------------------------------------------------------
................................................................................................................................................................................................................................................................CGGCGGTGGAGGAGGAGGAA........................................................................2021.001.00-----------------------------------1.00-----------------------------------------------------------------------------------
.....................................................................................................................................GGTCGGGGTGCGGGCG.......................................................................................................................................................................................................1611.001.00------------------------------------------1.00----------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................AAACGACTCTCGGATTATAGCATCGGGC.................2811.001.00------------------------------------------------------------------------------------------1.00----------------------------
...............................................................................................................................................................................................................................................................................................................AAACGACTCTCGGATTATAGCATCGG...................2611.001.00------------------------------------------------------------------------------------------------1.00----------------------
..........................................................................................................................................................................................................................CGCCGCCCGAGGCGGGAT................................................................................................................181.000.00--------------------------------------------1.00--------------------------------------------------------------------------
....................................................................................................................................................................................................................................................GGGCCACCCCCACGGCG.......................................................................................1711.001.00---------------1.00-------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................TCGGATTATAGCATCGGGC.................1911.001.00-----1.00-----------------------------------------------------------------------------------------------------------------
......................................................................................................................................GTCGGGGTGCGGGCGCGAC...................................................................................................................................................................................................1911.003.00-------------------1.00---------------------------------------------------------------------------------------------------
........................................................................................................................................CGGGGTGCGGGCGCCGTCT.................................................................................................................................................................................................191.000.00-----1.00-----------------------------------------------------------------------------------------------------------------
...................................................................................................................................CGGGTCGGGGTGCGGTGAC......................................................................................................................................................................................................1911.006.00----------------1.00------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................GGCGGTGGAGGAGGAGGCAAT......................................................................211.000.00----------------------------------------------------------------------1.00------------------------------------------------
...............................................................................................................................................CGGGCGCCAAGCGCCCGGC..........................................................................................................................................................................................191.000.00-------------------------------------------------------------------------------------1.00---------------------------------
......................................................................CCCGGGGAGCCCCGCCGG....................................................................................................................................................................................................................................................................181.000.00----------------------1.00------------------------------------------------------------------------------------------------
......................................................................................................................................GTCGGGGTGCGGGCGCGACG..................................................................................................................................................................................................2011.003.00-------------------1.00---------------------------------------------------------------------------------------------------
.....................................................................................................................................................................CCCAAGGGAGGCGGC........................................................................................................................................................................1530.670.67-----------------------------------------------0.33-----------------------------------------------------------0.33-----------
....................................................................................................................................................................................................................................................................................................................ACTCTCGGATTATAGC........................1620.500.50----------------------------------------------0.50------------------------------------------------------------------------
................................................................................................................................................................................................................................................................CGGCGGTGGAGGAGGAGG..........................................................................1840.500.50--------------------------------------------------0.25-------------------------------------------------------------0.25------
..................................................................................................................................................................................................................................................................GCGGTGGAGGAGGAGGAGGTG.....................................................................2190.330.22-------------------------0.11-------------------------------------------------------------------------------------------0.110.11
....................................................................................................................................GGGTCGGGGTGCGGGTC.......................................................................................................................................................................................................1740.250.25------------------------------------------------------------------------------------------------------------0.25----------
....................................................................................................................................GGGTCGGGGTGCGGGGC.......................................................................................................................................................................................................1740.250.25-----------------------------------------------------------------------------------------------------------------0.25-----
................................................................................................................................................................................................................................................................CGGCGGTGGAGGAGGAG...........................................................................1740.250.25--------------------------------------------------------------------------------------------------------------0.25--------
....................................................................................................................................GGGTCGGGGTGCGGGGCGG.....................................................................................................................................................................................................1940.250.25------------------------------------------------0.25----------------------------------------------------------------------
....................................................................................................................................GGGTCGGGGTGCGGG.........................................................................................................................................................................................................1540.250.25--------0.25--------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................GCGGTGGAGGAGGAGGA.........................................................................1790.220.22-------------------------------------------------------------------------------------------------------------------0.110.11--
........................................................................................................................................................................................................................................GCCTCGCGCCCCGGGAGC..................................................................................................1850.200.20------------------------0.20----------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................GCCTCGCGCCCCGGG.....................................................................................................1550.200.20------------------------------------------------------------------------------------------------------------------0.20----
..................................................................................................................................................................................................................................................................GCGGTGGAGGAGGAGGAGGGT.....................................................................2190.110.22--------------------------0.11--------------------------------------------------------------------------------------------

Antisense strand
CGTCCCAGTGCGCCAGCAGCGGCTGCTGTTCAAGGGCAAGGCCCTGGCAGGTACCCAGGGAGAGGAGACGCCCGGGGAGCCCCGCAGGAAGCGGGACCGGGGTGCGCGGGCCGAGGCCAGCAGCCGTGTGTCGGGTCGGGGTGCGGGCGCCAAGCGCCACATGACCCCAAGGGAGGCGGCCGCATGCCTCACAGCCGGATGCCGCAGCGCTCCGCTCCCGCCGCCCGAGGCGGCCTCGCGCCCCGGGCCACCCCCACGGCGGTGGAGGAGGAGGAACCCATCGATCTGTCTTTGGCAGATGGGAAACGACTCTCGGATTATAGCATCGGGCCCAACTCCAAGCTCAAC
.....................................................(((.(((..........))).)))...(((((.....))))).....(((((.((.(((..((((.(((....)))....))))..))).)).))))).....................................................................................................................................................................................................
..................................................51....................................................................................................153.................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		TAX577744(Rovira)
total RNA. (breast)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532877(GSM532877)
G691N. (cervix)		SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		TAX577589(Rovira)
total RNA. (breast)		GSM532879(GSM532879)
G659N. (cervix)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR553574(SRX182780)
source: Heart. (Heart)		TAX577743(Rovira)
total RNA. (breast)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)		TAX577588(Rovira)
total RNA. (breast)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM532884(GSM532884)
G871T. (cervix)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		TAX577579(Rovira)
total RNA. (breast)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		TAX577738(Rovira)
total RNA. (breast)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		GSM532874(GSM532874)
G699T. (cervix)		SRR040007(GSM532892)
G601T. (cervix)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR189784SRR040018(GSM532903)
G701N. (cervix)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577746(Rovira)
total RNA. (breast)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR444041(SRX128889)
Sample 2cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR040036(GSM532921)
G243N. (cervix)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		GSM532881(GSM532881)
G696N. (cervix)		SRR189782SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)		SRR040008(GSM532893)
G727N. (cervix)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		TAX577741(Rovira)
total RNA. (breast)		SRR040025(GSM532910)
G613T. (cervix)		TAX577590(Rovira)
total RNA. (breast)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)		TAX577742(Rovira)
total RNA. (breast)		SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040038(GSM532923)
G531N. (cervix)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR038860(GSM458543)
MM426. (cell line)		SRR191474(GSM715584)
16genomic small RNA (size selected RNA from t. (breast)		SRR040032(GSM532917)
G603N. (cervix)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		SRR191414(GSM715524)
31genomic small RNA (size selected RNA from t. (breast)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		TAX577453(Rovira)
total RNA. (breast)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191584(GSM715694)
98genomic small RNA (size selected RNA from t. (breast)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		TAX577745(Rovira)
total RNA. (breast)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR040027(GSM532912)
G220T. (cervix)		GSM532872(GSM532872)
G652T. (cervix)		SRR040028(GSM532913)
G026N. (cervix)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		GSM532876(GSM532876)
G547T. (cervix)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR444069(SRX128917)
Sample 26cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR444051(SRX128899)
Sample 11cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		SRR343334SRR191419(GSM715529)
41genomic small RNA (size selected RNA from t. (breast)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR040012(GSM532897)
G648N. (cervix)
......................................................................................................................................................................................................................CTCCCGCCGCCCGAGGCG.................................................................................................................... 182.000.00-------------------------------------------------------------------------------1.00-----------------1.00---------------------
......................................................................................................................................................................................GCATCCGGCTGTGAGGCATG.................................................................................................................................................. 2012.002.00-------------------------2.00---------------------------------------------------------------------------------------------
........................................................................................................CGCGGGCCGAGGCCAG.................................................................................................................................................................................................................................... 161.000.00---------------------------------------------------------------------------------------------1.00-------------------------
.....CAGTGCGCCAGCAGCGATT.................................................................................................................................................................................................................................................................................................................................... 191.000.00--------------------------------------------------------1.00--------------------------------------------------------------
.............................................................................................................GACACACGGCTGCTGGCCTCGGC........................................................................................................................................................................................................................ 2311.001.00------------------------------------------------------1.00----------------------------------------------------------------
........................................................................................................................................................................................................GCCGCAGCGCTCCGCGGGG................................................................................................................................. 191.000.00--------------------------------1.00--------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................GCTCCCGCCGCCCGACGGT.................................................................................................................... 191.000.00-----------------------------1.00-----------------------------------------------------------------------------------------
......................................................................................................................................................................................ATCCGGCTGTGAGGCATG.................................................................................................................................................... 1811.001.00-------------------------------------------1.00---------------------------------------------------------------------------
.........................................................................................................................................................................................................................CCGCCGCCCGAGGCGCGG................................................................................................................. 181.000.00-------------------1.00---------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................CCCGCCGCCCGAGGCCGGT................................................................................................................. 191.000.00----------------------------------------------------------------------------1.00------------------------------------------
........................................................................................................CGCGGGCCGAGGCCAGGTT................................................................................................................................................................................................................................. 191.000.00------------------------------------------------------------------------------------1.00----------------------------------
.............................................................................................................GCCGAGGCCAGCAGCGCCG............................................................................................................................................................................................................................ 191.000.00-------------------------------------1.00---------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................GGCCCGGGGCGCGAGG................................................................................................... 1620.500.50----------------------------------------------------------------------------------------------------------0.50------------
...............................................CCTCTCCCTGGGTACCTG........................................................................................................................................................................................................................................................................................... 1820.500.50---------------------------------------------------------------------------------------------------------0.50-------------
..............................................................................................................................................................................................................CGGCGGGAGCGGAGCGC............................................................................................................................. 1720.500.50-------0.50---------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................CGGCGGGAGCGGAGC............................................................................................................................. 1580.380.38--------0.12------------------------------------------------------------------------------------------------------0.25-------
...............................................................................................................................................................................................................................................GGGGGTGGCCCGGGGC............................................................................................. 1660.170.17---------0.17-------------------------------------------------------------------------------------------------------------