ID: uc004fju.6
GENE: IRAK1(3)
chrX:153284189-153284475-


(2)
AGO1.ip 		(1)
AGO1.ip OTHER.mut 		(4)
AGO2.ip 		(3)
B-CELL 		(2)
BRAIN 		(15)
BREAST 		(43)
CELL-LINE 		(2)
CERVIX 		(3)
HEART 		(4)
HELA 		(4)
LIVER 		(2)
OTHER 		(21)
SKIN 		(1)
XRN.ip

Sense strand
CTGCTTCCCTGTGGCCTCCACCGCCATCTCCAGCCCCTTCTTCTACCAAGGTAGGTGTCCCCTGCCCCCCAGGGAAGATTCGAGACAAGGAGGAAGGAATTCAGCCTTTGATGTAGCGCAGAGCCCCAGTCAGCCAAGCTGGGTCAGCTGGGAGGCAGCTGTGGTGGGGAGAGCCTGGAGCCTTGGGCAGAAGGGAAGAGACAGGGACCCCACCTGATCCAGGCTCTCTTCCCACAGCCAGGCCCAGAGAGCTCAGTGTCCCTCCTGCAGGGAGCCCGCCCCTTTCC
..............................................................................................................................................................((((((.((((((((((((((.((((......)))).......((((.......)))).))))))))))))))))))))..................................................
............................................................................................................................................................157.............................................................................237................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR189783SRR189784SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR189787SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR189785SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR189786SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR037938(GSM510476)
293Red. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR343335RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR343334SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR037936(GSM510474)
293cand1. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR037931(GSM510469)
293GFP. (cell line)		TAX577739(Rovira)
total RNA. (breast)		TAX577741(Rovira)
total RNA. (breast)		SRR029127(GSM416756)
A549. (cell line)		TAX577590(Rovira)
total RNA. (breast)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR038857(GSM458540)
D20. (cell line)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		GSM532876(GSM532876)
G547T. (cervix)		TAX577588(Rovira)
total RNA. (breast)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)		SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)		TAX577746(Rovira)
total RNA. (breast)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR029129(GSM416758)
SW480. (cell line)		SRR191426(GSM715536)
149genomic small RNA (size selected RNA from . (breast)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR191444(GSM715554)
109genomic small RNA (size selected RNA from . (breast)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		GSM416733(GSM416733)
HEK293. (cell line)		GSM956925PAZD5SRR037937(GSM510475)
293cand2. (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR038861(GSM458544)
MM466. (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029126(GSM416755)
143B. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191415(GSM715525)
33genomic small RNA (size selected RNA from t. (breast)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577579(Rovira)
total RNA. (breast)		SRR029130(GSM416759)
DLD2. (cell line)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR038862(GSM458545)
MM472. (cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040015(GSM532900)
G623T. (cervix)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
......................................................................................................................................................................................................................TGATCCAGGCTCTCTTCCCACAG..................................................231169.00169.00112.0023.0010.00-1.00---3.001.001.003.00---1.001.00-1.00--2.00---1.00--------------2.00-------1.00-------------1.00--------------1.00--1.00------------1.00------1.001.00------
......................................................................................................................................................................................................................TGATCCAGGCTCTCTTCCCACAGT.................................................241151.00169.0065.007.005.0012.006.00-4.006.002.001.003.00-1.003.001.00-2.001.00-3.001.00---1.001.00--1.001.002.00--1.00-1.002.00-1.001.00-2.00----1.00-----1.00----1.00-1.00-1.00-----1.00--1.00----------1.001.00---------1.00--1.001.00--1.00---1.00----
......................................................................................................................................................................................................................TGATCCAGGCTCTCTTCCCACA...................................................22168.0068.0056.001.002.00------1.00-------------------1.00--------1.001.00---------------------------------1.00------------1.001.00---1.00-------------1.00--
......................................................................................................................................................................................................................TGATCCAGGCTCTCTTCCCAC....................................................21127.0027.0018.001.001.00-2.00--------1.00----------------------------1.00--------------------1.00------------1.00-------------------------1.00-----
......................................................................................................................................................................................................................TGATCCAGGCTCTCTTCCCACAGA.................................................24114.00169.001.003.00------1.002.00--------1.00-------1.00------------------1.00-1.00--------1.00-------1.00-------------------------1.00-----------------
......................................................................................................................................................................................................................TGATCCAGGCTCTCTTCCCA.....................................................2017.007.006.00------1.00----------------------------------------------------------------------------------------------------
.................................................................................................................................................................TGGTGGGGAGAGCCTGGAG...........................................................................................................1916.006.00-----6.00------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................TGATCCAGGCTCTCTTCCCACAT..................................................2316.0068.003.001.00---------------2.00------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................TGATCCAGGCTCTCTTCCCACAGTAA...............................................2614.00169.003.00------------------------------1.00----------------------------------------------------------------------------
......................................................................................................................................................................................................................TGATCCAGGCTCTCTTCCCAAT...................................................2214.007.001.002.00-----------------------------------1.00----------------------------------------------------------------------
..................................................................................................................................................................................................................CACCTGATCCAGGCTCTCTTCCCACT...................................................263.000.002.00-----------------------1.00-----------------------------------------------------------------------------------
......................................................................................................................................................................................................................TGATCCAGGCTCTCTTCCTACA...................................................223.000.002.00----------1.00------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................TGATCCAGGCTCTCTTCCACAG...................................................223.000.003.00-----------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................TGATCCAGGCTCTCTTCCCACAA..................................................2313.0068.003.00-----------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................GATCCAGGCTCTCTTCCCACAG..................................................2213.003.001.00---2.00-------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................CACCTGATCCAGGCTCTCTTCC.......................................................2213.003.00----------------------2.00--------------------------------1.00----------------------------------------------------
......................................................................................................................................................................................................................TGATCCAGGCTCTCTTCCCACT...................................................2213.0027.003.00-----------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................TGATCCAGGCTCTCTTCCCGCAG..................................................232.000.002.00-----------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................CTGATCCAGGCTCTCTTCCCACA...................................................2312.002.002.00-----------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................GATCCAGGCTCTCTTCCCACAGT.................................................2312.003.002.00-----------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................AGCCAGGCCCAGAGAGCTCAGTGTCCCTCCCG....................322.000.00--------------------------------------------------------------------------1.00---1.00-----------------------------
......................................................................................................................................................................................................................TGATCCAGGCTCTCTTCCCACCGT.................................................2412.0027.00----------------------------------1.00--------------------------------------------1.00----------------------------
........................................................................................................................................................................................................................ATCCAGGCTCTCTTCCCACAG..................................................2112.002.001.00-1.00---------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................CACCTGATCCAGGCTCTCTTC........................................................2112.002.00------------2.00-----------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................CACCTGATCCAGGCTCTCTTCCC......................................................2312.002.00--------------------------1.00---------------------------------------1.00-----------------------------------------
......................................................................................................................................................................................................................TGATCCAGGCTCTCTTCCCATTTA.................................................2412.007.002.00-----------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................ATCCAGGCTCTCTTCCCACA...................................................2012.002.001.00------------------------------------1.00----------------------------------------------------------------------
....................................................................................................................................................................................................................CCTGATCCAGGCTCTCTTCCCACG...................................................242.000.00-----2.00------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................TGATCCAGGCTCTCTTCCCACAGTT................................................2512.00169.00-----------------------------------1.00----------------------1.00-------------------------------------------------
......................................................................................................................................................................................................................TGATCCAGGCTCTCTTCCCACCG..................................................2312.0027.001.00-1.00---------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................CACCTGATCCAGGCTCTCTTCCCA.....................................................2412.002.00-----------------------2.00------------------------------------------------------------------------------------
.................................................................................................................................................................TGGTGGGGAGAGCCTGGAGC..........................................................................................................2012.002.00---------------1.00--------------------------1.00-----------------------------------------------------------------
...........................................................................................................................................................................................................................CAGGCTCTCTTCCCACAG..................................................1812.002.001.001.00----------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................TGATCCAGGCTCTCTTCCCATT...................................................2212.007.002.00-----------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................GATCCAGGCTCTCTTCCCACA...................................................2112.002.001.00----------------------------------------------------------------------------------1.00------------------------
......................................................................................................................................................................................................................TGATCCAGGCTCTCTTCCCACACC.................................................2411.0068.00--------------------------------1.00---------------------------------------------------------------------------
.....................................................................................................................................................................................................................CTGATCCAGGCTCTCTTCCCATT...................................................231.000.001.00-----------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................CCAGAGAGCTCAGTGTCCC.........................1911.001.00--------------------------------------------------------------------------------------------------1.00---------
..................................................................................................................................................................................................................CACCTGATCCAGGCTCTCTTCCCAT....................................................2511.002.00-----1.00------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................TGATCCAGGCTCTCTTCCCACATA.................................................2411.0068.00----------------------------------------------------------------------------------------1.00-------------------
......................................................................................................................................................................................................................TGATCCAGGCTCTCTTCCCCCA...................................................221.000.001.00-----------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................TGATCCAGGCTCTCTTCCCACATG.................................................2411.0068.00---------------------------------1.00--------------------------------------------------------------------------
......................................................................................................................................................................................................................TGATCCAGGCTCTCTTCCCACC...................................................2211.0027.00--------------------------------------------1.00---------------------------------------------------------------
.................................................................................................................................................................................................................................................GCCCAGAGAGCTCAGTGTCCCTC.......................2311.001.00--------------------------------------------------------------------1.00---------------------------------------
......................................................................................................................................................................................................................TGATCCAGGCTCTCTTCTCAC....................................................211.000.001.00-----------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................CACCTGATCCAGGCTCTCTTTCC......................................................231.000.00------------------------------------------------------------1.00-----------------------------------------------
......................................................................................................................................................................................................................TGATCCAGGCTCTCTTCCCACAGTC................................................2511.00169.00------1.00-----------------------------------------------------------------------------------------------------
.........................ATCTCCAGCCCCTTCTTCTACCAAGCCA..........................................................................................................................................................................................................................................281.000.00--------------------1.00---------------------------------------------------------------------------------------
......................................................................................................................................................................................................................TGATCCAGGCTCTCTTCCCACACT.................................................2411.0068.00--------------1.00---------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................GCCCAGAGAGCTCAGTCA............................181.000.00---------------------------------------------------------------------1.00--------------------------------------
..................................................................................................................................................................................................................CACCTGATCCAGGCTCTCTTCCCACA...................................................2611.001.001.00-----------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................TGATCCAGGCTCTCTTCCCATAGT.................................................2411.007.00--------------------------------------------------1.00---------------------------------------------------------
......................................................................................................................................................................................................................TGATCCAGGCTCTCTTCCCACAGAT................................................2511.00169.001.00-----------------------------------------------------------------------------------------------------------
..........................................................................AAGATTCGAGACAAGGAGG..................................................................................................................................................................................................1911.001.00-----------------------------------------------------------------1.00------------------------------------------
......................................................................................................................................................................................................................TGATCCAGGCTCTCTTCCCACAGAC................................................2511.00169.00------1.00-----------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................CCAGGCTCTCTTCCCATAGT.................................................201.000.001.00-----------------------------------------------------------------------------------------------------------
...........................................................................................................................................................CAGCTGTGGTGGGGAGAGCCCGG.............................................................................................................231.000.00--------------1.00---------------------------------------------------------------------------------------------
.............................................................................................................................................................GCTGTGGTGGGGAGAGCCTGGATATT........................................................................................................261.000.00---------1.00--------------------------------------------------------------------------------------------------
.................................................................................................................................................................TGGTGGGGAGAGCCTGGAGCCTTAA.....................................................................................................251.000.00---------------------------1.00--------------------------------------------------------------------------------
............................................................................................................................................................AGCTGTGGTGGGGAGAGCCTGGTA...........................................................................................................241.000.00---------------------------1.00--------------------------------------------------------------------------------
...........................................................................................................................................................CAGCTGTGGTGGGGAGAGCCTGGA............................................................................................................2411.001.00------------------1.00-----------------------------------------------------------------------------------------
......................................................................................................................................................................................................................TGATCCAGGCTCTCTTCCCACTAT.................................................2411.0027.001.00-----------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................TGATCCAGGCTCTCTTCCCAA....................................................2111.007.001.00-----------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................TGATCCAGGCTCTCTTCCCACAGTAC...............................................2611.00169.001.00-----------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................GGAGAGCCTGGAGCCCCG......................................................................................................181.000.00---------------------------------------------------1.00--------------------------------------------------------
........................................................................................................................................................................................................................ATCCAGGCTCTCTTCCCACATC.................................................2211.002.00-----------1.00------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................TGATCCAGGCTCTCTTCCCAGT...................................................2211.007.001.00-----------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................TGATCCAGGCTCTCTTCCACAT...................................................221.000.001.00-----------------------------------------------------------------------------------------------------------
..................................................................................AGACAAGGAGGAAGGAGATG.........................................................................................................................................................................................201.000.00-----------------------------------------------------------------------------------------1.00------------------
......................................................................................................................................................................................................................TGATCCAGGCTCTCTTCCCACAGTTA...............................................2611.00169.00-----------------------------------------------------------------------1.00------------------------------------
.....................................................................................................................................................................................................................CTGATCCAGGCTCTCTTCCCACAAT.................................................2511.002.001.00-----------------------------------------------------------------------------------------------------------
.............................................................................................................................................................GCTGTGGTGGGGAGAGCCTGG.............................................................................................................2111.001.00----------------------------1.00-------------------------------------------------------------------------------
.....................................................................................................................................................................................................................CTGATCCAGGCTCTCTTCCCACAG..................................................2411.001.001.00-----------------------------------------------------------------------------------------------------------
...........................................................................................................................................................CAGCTGTGGTGGGGAGCCTG................................................................................................................201.000.00--------------1.00---------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................AGAGCTCAGTGTCCCTCCTGCAGGGAGCC...........2911.001.00--------------------------------------------------------------------------------------------------------1.00---
....................................................................................................................................................................TGGGGAGAGCCTGGAGCCTTGG.....................................................................................................2211.001.00---------------------------------------------------------------------------1.00--------------------------------
............................................................................GATTCGAGACAAGGAGGAAGGAATTC.........................................................................................................................................................................................2611.001.00-------------------------------------------1.00----------------------------------------------------------------
.................................................................................................................................................................................................................................................GCCCAGAGAGCTCAGTCGGT..........................201.000.00------------------------------------------------------1.00-----------------------------------------------------
..................................................................................................................................CAGCCAAGCTGGGTCTCCA..........................................................................................................................................191.000.00----------------------------------1.00-------------------------------------------------------------------------
......................................................................................................................................................................................................................TGATCCAGGCTCTCTTCCCACAAC.................................................2411.0068.00--1.00---------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................TGATCCAGGCTCTCTTCCCACATT.................................................2411.0068.001.00-----------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................CAGAGAGCTCAGTGTAGGG........................191.000.00------------------------------------------------------------------------1.00-----------------------------------
..................................................................................................................................................................................................................CACCTGATCCAGGCTCTCTTCCCAA....................................................2511.002.001.00-----------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................CCAGGCTCTCTTCCCACAG..................................................1911.001.00----------1.00-------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................CTGATCCAGGCTCTCTTCCCACAT..................................................2411.002.001.00-----------------------------------------------------------------------------------------------------------
..................................................................................AGACAAGGAGGAAGGCTGA..........................................................................................................................................................................................191.000.00-------------------------------------------------1.00----------------------------------------------------------
..............................................................................................................................................................................................AAGGGAAGAGACAGGGACCCCA...........................................................................2211.001.00-------------------------------1.00----------------------------------------------------------------------------
......................................................................................................................................................................................................................TGATCCAGGCTCTCTTCCCACAC..................................................2311.0068.001.00-----------------------------------------------------------------------------------------------------------
..................................................................................AGACAAGGAGGAAGGAGAT..........................................................................................................................................................................................191.000.00----------------------------------------------------------------------------------------------1.00-------------
.......................CCATCTCCAGCCCCTTCT......................................................................................................................................................................................................................................................1830.330.33----------------------------------------------------------------------------------------------------------0.33-

Antisense strand
CTGCTTCCCTGTGGCCTCCACCGCCATCTCCAGCCCCTTCTTCTACCAAGGTAGGTGTCCCCTGCCCCCCAGGGAAGATTCGAGACAAGGAGGAAGGAATTCAGCCTTTGATGTAGCGCAGAGCCCCAGTCAGCCAAGCTGGGTCAGCTGGGAGGCAGCTGTGGTGGGGAGAGCCTGGAGCCTTGGGCAGAAGGGAAGAGACAGGGACCCCACCTGATCCAGGCTCTCTTCCCACAGCCAGGCCCAGAGAGCTCAGTGTCCCTCCTGCAGGGAGCCCGCCCCTTTCC
..............................................................................................................................................................((((((.((((((((((((((.((((......)))).......((((.......)))).))))))))))))))))))))..................................................
............................................................................................................................................................157.............................................................................237................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR189783SRR189784SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR189787SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR189785SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR189786SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR037938(GSM510476)
293Red. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR343335RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR343334SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR037936(GSM510474)
293cand1. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR037931(GSM510469)
293GFP. (cell line)		TAX577739(Rovira)
total RNA. (breast)		TAX577741(Rovira)
total RNA. (breast)		SRR029127(GSM416756)
A549. (cell line)		TAX577590(Rovira)
total RNA. (breast)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR038857(GSM458540)
D20. (cell line)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		GSM532876(GSM532876)
G547T. (cervix)		TAX577588(Rovira)
total RNA. (breast)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)		SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)		TAX577746(Rovira)
total RNA. (breast)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR029129(GSM416758)
SW480. (cell line)		SRR191426(GSM715536)
149genomic small RNA (size selected RNA from . (breast)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR191444(GSM715554)
109genomic small RNA (size selected RNA from . (breast)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		GSM416733(GSM416733)
HEK293. (cell line)		GSM956925PAZD5SRR037937(GSM510475)
293cand2. (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR038861(GSM458544)
MM466. (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029126(GSM416755)
143B. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191415(GSM715525)
33genomic small RNA (size selected RNA from t. (breast)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577579(Rovira)
total RNA. (breast)		SRR029130(GSM416759)
DLD2. (cell line)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR038862(GSM458545)
MM472. (cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040015(GSM532900)
G623T. (cervix)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
.........................................................................................................................................................................................................................GCTGTGGGAAGAGAGCCTGGA................................................. 2111.001.00---------------1.00--------------------------------------------------------------------------------------------
...........................................................................................................................CCCCAGTCAGCCAAGCTGGTGC.............................................................................................................................................. 221.000.00------1.00-----------------------------------------------------------------------------------------------------
.............................CCAGCCCCTTCTTCTCCTG............................................................................................................................................................................................................................................... 191.000.00------------1.00-----------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................AGCTCAGTGTCCCTCCTTGCC................. 211.000.00------1.00-----------------------------------------------------------------------------------------------------
.......................CCATCTCCAGCCCCTTCG...................................................................................................................................................................................................................................................... 181.000.00-------------------------------------------------------------------------------------1.00----------------------
.................................................................................................................................................................................................................................CTCTTCCCACAGCCAGGGGA.......................................... 201.000.00--------------------------------1.00---------------------------------------------------------------------------
.......................CCATCTCCAGCCCCTTAGAC.................................................................................................................................................................................................................................................... 201.000.00-----------------------------------------------------1.00------------------------------------------------------
.......................................................................................................................................................................................................................................................AGAGCTCAGTGTCCCTCCTGCG.................. 221.000.00-------------------------------------------------------------------------------------------------1.00----------
..........................................................................................................................................................................................GCAGAAGGGAAGAGAGCTC.................................................................................. 191.000.00--1.00---------------------------------------------------------------------------------------------------------
.......................CCATCTCCAGCCCCTTTA...................................................................................................................................................................................................................................................... 181.000.00------------------------------------------------------------------------------------1.00-----------------------
.........................................................................................................................CTTGGCTGACTGGGGCT..................................................................................................................................................... 1730.330.33-----------------------------------------------------------------------------------------------------------0.33
................................TGGTAGAAGAAGGGGC............................................................................................................................................................................................................................................... 1630.330.33---------------0.33--------------------------------------------------------------------------------------------