ID: uc004fio.2_intron_8_0_chrX_153055280_r
GENE: (3)
chrX:153055230-153055699-


(2)
AGO1.ip 		(2)
AGO2.ip 		(1)
AGO3.ip 		(5)
B-CELL 		(6)
BRAIN 		(21)
BREAST 		(28)
CELL-LINE 		(4)
CERVIX 		(6)
HEART 		(4)
HELA 		(1)
KIDNEY 		(6)
LIVER 		(3)
OTHER 		(33)
SKIN 		(1)
TESTES 		(2)
UTERUS 		(1)
XRN.ip

Sense strand
GGGGATGGCATCGGGCCAGAGCTCATGCTGCATGTCAAGTCCGTCTTCAGGTATGGAGCTCCTGGGTCCCCGCCTTGTCCTCAGCCAGGGGGCCCTGAGGACTTTGTGCCAAGAGGGGCATTGCGCCCAGAAGCACTCGGTGAGGCCATGGCAAGACGACCTGTAAGCCCAGGCCTTGCGTCCCATGGCCTGTGATCCCGCCAGACTGGCCTGGGCTCGGGGAAGGTGGCACCAGTCCTGCCACAGTGTGCATTGTGGAGTTCAAGCGTGTCCCCATCAGTCAGTGAAGGTGGGCCCAGTCCCTTCTCAGTCAGAGCCAGGTCAGGGCAGGTAGCAACAGGAGAGAGGTAGCCTGGGCAGGCTTCCTGGAGGAGGTGCGGGGGGGTCTGGGCCAGCCTCCCTGACCCTGCCGTGCCTCAGGCACGCATGTGTACCAGTGGACTTTGAAGAGGTGCACGTGAGTTCCAATG
.......................................................................................................................................................................................................................................................................................................................................((((.(((..((((..........)))).....))).))))...((((..(((.((((((.(((.......))).)))))).)))..))))....................................................
................................................................................................................................................................................................................................................................................................................................321................................................................................................420................................................
SizePerfect hitTotal NormPerfect NormRoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR037936(GSM510474)
293cand1. (cell line)		DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR444055(SRX128903)
Sample 27_2cDNABarcode: AF-PP-343: ACG CTC TT. (skin)		SRR037937(GSM510475)
293cand2. (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189782SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		TAX577590(Rovira)
total RNA. (breast)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)		SRR029125(GSM416754)
U2OS. (cell line)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553576(SRX182782)
source: Testis. (testes)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR191410(GSM715520)
20genomic small RNA (size selected RNA from t. (breast)		SRR191409(GSM715519)
19genomic small RNA (size selected RNA from t. (breast)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		TAX577580(Rovira)
total RNA. (breast)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR207117(GSM721079)
Whole cell RNA. (cell line)		SRR037935(GSM510473)
293cand3. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR191575(GSM715685)
85genomic small RNA (size selected RNA from t. (breast)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR191508(GSM715618)
152genomic small RNA (size selected RNA from . (breast)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR189787SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191581(GSM715691)
104genomic small RNA (size selected RNA from . (breast)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR191492(GSM715602)
154genomic small RNA (size selected RNA from . (breast)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR040008(GSM532893)
G727N. (cervix)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040039(GSM532924)
G531T. (cervix)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR029127(GSM416756)
A549. (cell line)		SRR191594(GSM715704)
70genomic small RNA (size selected RNA from t. (breast)		SRR037938(GSM510476)
293Red. (cell line)		SRR040014(GSM532899)
G623N. (cervix)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038859(GSM458542)
MM386. (cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444047(SRX128895)
Sample 27_1cDNABarcode: AF-PP-343: ACG CTC TT. (skin)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191415(GSM715525)
33genomic small RNA (size selected RNA from t. (breast)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038860(GSM458543)
MM426. (cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191414(GSM715524)
31genomic small RNA (size selected RNA from t. (breast)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)		TAX577744(Rovira)
total RNA. (breast)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191445(GSM715555)
110genomic small RNA (size selected RNA from . (breast)		TAX577738(Rovira)
total RNA. (breast)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040020(GSM532905)
G699N_2. (cervix)		SRR038862(GSM458545)
MM472. (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191460(GSM715570)
33genomic small RNA (size selected RNA from t. (breast)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191632(GSM715742)
78genomic small RNA (size selected RNA from t. (breast)		DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR343337SRR189784SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
...............................................................................................................................................................................................................................................................................................................................................................................................................CCTGACCCTGCCGTGCCTCAGT.................................................22153.005.00-2.00--2.00--1.001.00-1.001.00-1.002.00-----3.001.00--1.00-2.001.00-1.002.002.001.001.00-2.002.00-1.00---1.00---1.00-----1.00-1.00-1.00-1.00---1.00-1.00-1.00--------1.00---------1.001.00--1.00--1.00-1.001.001.00-----1.00----1.00----1.00--1.00-1.00------
...............................................................................................................................................................................................................................................................................................................................................................................................................CCTGACCCTGCCGTGCCTCAGA.................................................22114.005.00-2.00-1.00-------1.00-1.00-------1.00-1.00---------1.00---1.00-----1.00----1.00----------------------------------1.00----------------1.00-----1.00-----------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGTGGACTTTGAAGAGGTG................2117.007.00--7.00-------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................CTGACCCTGCCGTGCCTCAGT.................................................2117.001.00-1.00--------------------------------2.00--------------------------------1.00-1.00--------------1.00-----------------------------1.00---------
...............................................................................................................................................................................................................................................................................................................................................................................................................CCTGACCCTGCCGTGCCTCA...................................................2015.005.00-1.00-------------------------1.00-----------------------------------------------------------1.00--1.00--1.00------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................CCTGACCCTGCCGTGCCTCAG..................................................2115.005.00-1.00-------------1.00-------------------------------1.00---------1.00-------------------1.00----------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................CTGACCCTGCCGTGCCTCAGTT................................................2213.001.00--------------------------------1.00----------------------------------------------1.00--1.00-----------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................AGGTAGCCTGGGCAGGCTTCCTGGAGGA.................................................................................................2813.003.00-----------------3.00----------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGACTTTGAAGAGGTGCA..............1913.003.00------------1.00-----2.00---------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................TGCGGGGGGGTCTGGGC..............................................................................1713.003.00----------------3.00-----------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................CCTGACCCTGCCGTGCCTCAGTA................................................2312.005.00----------1.00----------------------------------------------------------------------------------------1.00------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................CGCATGTGTACCAGTGGACTTTGAAGAGG..................2912.002.002.00---------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................CTGACCCTGCCGTGCCTCAGA.................................................2112.001.00-----------1.00----------------------------------------------------------1.00-----------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................GTACCAGTGGACTTTGAAGAGG..................2212.002.002.00---------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAGGTGCACGTGAGTTCCAA..2312.002.00---------2.00------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTGTACCAGTGGACTTT.........................1912.002.00-----------------------------------------------------1.00--------------1.00-------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCATGTGTACCAGTGGACTTTGAAGAGGTG................3212.002.001.00--1.00------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................GCATGTGTACCAGTGGACTT..........................2012.002.00--------1.00----------------------------------------------------------------1.00--------------------------------------------------
...........................................................................................................................................................................................GCCTGTGATCCCGCCAGAC........................................................................................................................................................................................................................................................................1912.002.00------------2.00---------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................CAGTCCTGCCACAGTGTGCATTGTGGA...................................................................................................................................................................................................................2712.002.00-------2.00--------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................CGCATGTGTACCAGTGGACTTTGAAGAGGTGC...............3212.002.001.00--------------------------------------1.00------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................CCTGACCCTGCCGTGCCTCAGTT................................................2312.005.00--------------1.00----------------------------------------------------------------------------------------1.00--------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................CCCTGACCCTGCCGTGCCTCAGT.................................................232.000.00------2.00---------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTTGAAGAGGTGCACGTGAGTTC.....2511.001.00---------1.00------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................TGGGCTCGGGGAAGGTGGCA...............................................................................................................................................................................................................................................2011.001.00----------------------------------------------------------------------------1.00-----------------------------------------------
................................................................................................................................................................................................................................................................................................................................................ACAGGAGAGAGGTAGTAT....................................................................................................................181.000.00----------------------------------------------------------------------------------------1.00-----------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................GCGGGGGGGTCTGGGGCC............................................................................181.000.00--------------------------------------------------------------------------1.00-------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................CCTCCCTGACCCTGCCGTGCCTCAGC.................................................261.000.00------------------------------------------------------------1.00---------------------------------------------------------------
..........TCGGGCCAGAGCTCATGCTGCATGTCAAGTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................3111.001.00-----1.00----------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................CAGGGCAGGTAGCAACAGGAGAGAGGTAGCCT....................................................................................................................3211.001.00-----------------------1.00----------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................CTGACCCTGCCGTGCCTCACA.................................................211.000.00----1.00-----------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGACTTTGAAGAGGTGCACGT...........2211.001.00-----------------------------------------------------------------------------------------------------1.00----------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................CCTGACCCTGCCGTGCCTCATAAA...............................................2411.005.00-----------------------------------------------------------------------------------------------------------------------1.00----
........................................................................................................................................................................................................................................................................................................................................................................................................................................GCATGTGTACCAGTGGACT...........................1911.001.00-------------------1.00--------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................TGGAGGAGGTGCGGGACGC.....................................................................................191.000.00------------------------------------------------------------------------------------------------------------------------1.00---
................................................................................................................................................................................................................................................................................................................................................................................................................CTGACCCTGCCGTGCCTCAGTTA...............................................2311.001.00----1.00-----------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................TGCGGGGGGGTCTGGCGGC............................................................................191.000.00-------------------------------------------------1.00--------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................CTGACCCTGCCGTGCCTCACC.................................................211.000.00-----------------------------------------1.00----------------------------------------------------------------------------------
.........................................................................................................................................................................................................................CGGGGAAGGTGGCACGGG...........................................................................................................................................................................................................................................181.000.00-----------------------------------------------------------------1.00----------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAGTGGACTTTGAGG.....................171.000.00-------------------------------------------------------------------------------------------------1.00--------------------------
..........................................................................................................................................................................................................................GGGGAAGGTGGCACCGGGC.........................................................................................................................................................................................................................................191.000.001.00---------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGACTTTGAAGAGGTGCAC.............2011.001.00----------------------1.00-----------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................CGGGGAAGGTGGCACGGGG..........................................................................................................................................................................................................................................191.000.00---------------------------------------------------------------------------------------------------------------1.00------------
.........................................................................................................................................................................................................................................................................GCGTGTCCCCATCAGTCAGTGAA......................................................................................................................................................................................2311.001.00----------------------------------------------------------------------------------------------------------------------1.00-----
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGAAGAGGTGCACGTGAGTT......2311.001.00---------------------------------------------1.00------------------------------------------------------------------------------
...............CCAGAGCTCATGCTGCATG....................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001.00------------------1.00---------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................CGCATGTGTACCAGTGGACTTTG........................2311.001.00--------1.00-------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................GGCACGCATGTGTACCAGTGGACTTTCAA......................291.000.00----1.00-----------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGGACTTTGAAGAGGTGCACGTGAGTTCCAA..3311.001.00---1.00------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................CCTGACCCTGCCGTGCCTCAGTAA...............................................2411.005.00------1.00---------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAGGTGCACGTGAGTTCC....2111.001.00------------------------------------------------------------------------1.00---------------------------------------------------
..................................................................................................................................................................................................................................TGGCACCAGTCCTGCAGGA.................................................................................................................................................................................................................................191.000.00-------------------------------------------------------1.00--------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................AGGAGGTGCGGGGGGGTCTGGGTTAT...........................................................................261.000.00--------1.00-------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................CCTGACCCTGCCGTGCCTCAAA.................................................2211.005.00-----1.00----------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTACCAGTGGACTTTGAAGAGGT.................2511.001.001.00---------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................GTACCAGTGGACTTTGAAGAG...................2111.001.001.00---------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................TCGGTGAGGCCATGGCAAGACGAC......................................................................................................................................................................................................................................................................................................................2411.001.00---1.00------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................CCTGACCCTGCCGTGCCA.....................................................181.000.00-------------------------------------------------------------------------------------------------------------1.00--------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTGTACCAGTGGACTTA.........................191.000.00-------------------1.00--------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................CCTGGGCTCGGGGAACCCT..................................................................................................................................................................................................................................................191.000.00----------------------1.00-----------------------------------------------------------------------------------------------------
.......................................................................................GGGGGCCCTGAGGACGGCC............................................................................................................................................................................................................................................................................................................................................................................191.000.00------------------------------------------------------------------------------1.00---------------------------------------------
.............GGCCAGAGCTCATGCTGCATGTCAAGTCC............................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001.00---------1.00------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTTTGAAGAGGTGCACGTGAG........2311.001.00--------------------------------------------1.00-------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGACTTTGAAGAGGTGCAA.............2011.003.00-------------------1.00--------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................GGAGGTGCGGGGGGGTCTGGA...............................................................................211.000.00---------------------------------------------------------------------------------1.00------------------------------------------
...................................................................................................................................................ATGGCAAGACGACCTGTA.................................................................................................................................................................................................................................................................................................................1811.001.00------------------------------------------------------------------------------------------------------------1.00---------------
...............................................................................................................................................................................................................................................................................................................................................................................................................CCTGACCCTGCCGTGCCTCAGAT................................................2311.005.00----------------------------------------1.00-----------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................TGTACCAGTGGACTTTGAAGAGG..................2311.001.001.00---------------------------------------------------------------------------------------------------------------------------
.....TGGCATCGGGCCAGAGCTCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001.00-----------------------------------------------------------------------------------------------------------------1.00----------
...............................................................................................................................................................................................................................................................................................................................................................................................................CCTGACCCTGCCGTGCCTC....................................................1911.001.00---------------------------------------------------1.00------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................CCTGACCCTGCCGTGCCTCAGAA................................................2311.005.00-----------------------------1.00----------------------------------------------------------------------------------------------
.......................CATGCTGCATGTCAAGTCCGTCTTCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001.00-------1.00--------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................TGTACCAGTGGACTTTGAAGAGGTG................2511.001.00------------------------1.00---------------------------------------------------------------------------------------------------
........CATCGGGCCAGAGCTCTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................181.000.00-----1.00----------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................TACCAGTGGACTTTGAAGA....................1911.001.00-------------------------------------------------------------1.00--------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTGTACCAGTGGACT...........................1711.001.00-----------------------------------------------------------1.00----------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGGCACGCATGTGTACCAGTGGACTTTG........................3011.001.00-----1.00----------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................AGGTCAGGGCAGGTAGCATGG...................................................................................................................................211.000.00--------------------------------------------------------------------------------1.00-------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGGACTTTGAAGAGGTGCA..............2111.001.00---------------------------------------------------------------1.00------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................CATGTGTACCAGTGGACTTTGAAGAGGT.................2811.001.00---1.00------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................CCTGACCCTGCCGTGCCTTAG..................................................211.000.00-------------------------1.00--------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGTGCACGTGAGTTCCAAT.2111.001.00-----------------------------------------------------------------------1.00----------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................CCTGACCCTGCCGTGCCTCAGTAT...............................................2411.005.00----------1.00-----------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................TGACCCTGCCGTGCCTCAGAGA...............................................221.000.00---------------1.00------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................CACGCATGTGTACCAGTGGACTTTGAAGAGG..................3111.001.00---1.00------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................CGCATGTGTACCAGTGGA.............................1811.001.001.00---------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................CCTGACCCTGCCGTGCCTCAGTAG...............................................2411.005.00--------------------------------------------------------------------------------------------------------------------1.00-------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGACTTTGAAGAGGTGCA..............2011.001.00-----1.00----------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................TGCGGGGGGGTCTGGG...............................................................................1611.001.00-------------------------------------------------------------------------------------------1.00--------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................CTGACCCTGCCGTGCCTCAG..................................................2011.001.00--------------------------------------------------------------------------------------------------------1.00-------------------
................................................................................................................................................................................................................GCCTGGGCTCGGGGAAATAG..................................................................................................................................................................................................................................................201.000.00-------------------------1.00--------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................CTCGGGGAAGGTGGCCGAT............................................................................................................................................................................................................................................191.000.00--------------------------------------------------1.00-------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................CTGACCCTGCCGTGCCTCCTTT................................................221.000.00--------------------------------------------------------------------------------------------------1.00-------------------------
.........................................................................................................................................................................................................................CGGGGAAGGTGGCACGG............................................................................................................................................................................................................................................171.000.00---------------------------------------------------------------------------------------------------------1.00------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................CCCTGACCCTGCCGTGCCTCA...................................................2111.001.00------1.00---------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................CCATGGCCTGTGATCCCGC.............................................................................................................................................................................................................................................................................1911.001.00-------------1.00--------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTGGACTTTGAAGAGGT.................1920.500.50---------------------------------------0.50------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTGGACTTTGAAGAGG..................1820.500.50-------------------------------------0.50--------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGGACTTTGAAGAGGT.................1820.500.50--------------------------------------0.50-------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGACTTTGAAGAGGTGC...............1820.500.50----------------------------------------0.50-----------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGTGGACTTTGAAG.....................1630.330.33---------------------------------------------------------------------------------------------------------------------------0.33
...........................................................................................................................................................................................................................................................................................................................................................................................GGGGGGTCTGGGCCAG...........................................................................1630.330.33-------------------------------------------------------------------------------------------------------------------------0.33--

Antisense strand
GGGGATGGCATCGGGCCAGAGCTCATGCTGCATGTCAAGTCCGTCTTCAGGTATGGAGCTCCTGGGTCCCCGCCTTGTCCTCAGCCAGGGGGCCCTGAGGACTTTGTGCCAAGAGGGGCATTGCGCCCAGAAGCACTCGGTGAGGCCATGGCAAGACGACCTGTAAGCCCAGGCCTTGCGTCCCATGGCCTGTGATCCCGCCAGACTGGCCTGGGCTCGGGGAAGGTGGCACCAGTCCTGCCACAGTGTGCATTGTGGAGTTCAAGCGTGTCCCCATCAGTCAGTGAAGGTGGGCCCAGTCCCTTCTCAGTCAGAGCCAGGTCAGGGCAGGTAGCAACAGGAGAGAGGTAGCCTGGGCAGGCTTCCTGGAGGAGGTGCGGGGGGGTCTGGGCCAGCCTCCCTGACCCTGCCGTGCCTCAGGCACGCATGTGTACCAGTGGACTTTGAAGAGGTGCACGTGAGTTCCAATG
.......................................................................................................................................................................................................................................................................................................................................((((.(((..((((..........)))).....))).))))...((((..(((.((((((.(((.......))).)))))).)))..))))....................................................
................................................................................................................................................................................................................................................................................................................................321................................................................................................420................................................
SizePerfect hitTotal NormPerfect NormRoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR037936(GSM510474)
293cand1. (cell line)		DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR444055(SRX128903)
Sample 27_2cDNABarcode: AF-PP-343: ACG CTC TT. (skin)		SRR037937(GSM510475)
293cand2. (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189782SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		TAX577590(Rovira)
total RNA. (breast)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)		SRR029125(GSM416754)
U2OS. (cell line)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553576(SRX182782)
source: Testis. (testes)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR191410(GSM715520)
20genomic small RNA (size selected RNA from t. (breast)		SRR191409(GSM715519)
19genomic small RNA (size selected RNA from t. (breast)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		TAX577580(Rovira)
total RNA. (breast)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR207117(GSM721079)
Whole cell RNA. (cell line)		SRR037935(GSM510473)
293cand3. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR191575(GSM715685)
85genomic small RNA (size selected RNA from t. (breast)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR191508(GSM715618)
152genomic small RNA (size selected RNA from . (breast)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR189787SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191581(GSM715691)
104genomic small RNA (size selected RNA from . (breast)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR191492(GSM715602)
154genomic small RNA (size selected RNA from . (breast)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR040008(GSM532893)
G727N. (cervix)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040039(GSM532924)
G531T. (cervix)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR029127(GSM416756)
A549. (cell line)		SRR191594(GSM715704)
70genomic small RNA (size selected RNA from t. (breast)		SRR037938(GSM510476)
293Red. (cell line)		SRR040014(GSM532899)
G623N. (cervix)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038859(GSM458542)
MM386. (cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444047(SRX128895)
Sample 27_1cDNABarcode: AF-PP-343: ACG CTC TT. (skin)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191415(GSM715525)
33genomic small RNA (size selected RNA from t. (breast)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038860(GSM458543)
MM426. (cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191414(GSM715524)
31genomic small RNA (size selected RNA from t. (breast)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)		TAX577744(Rovira)
total RNA. (breast)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191445(GSM715555)
110genomic small RNA (size selected RNA from . (breast)		TAX577738(Rovira)
total RNA. (breast)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040020(GSM532905)
G699N_2. (cervix)		SRR038862(GSM458545)
MM472. (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191460(GSM715570)
33genomic small RNA (size selected RNA from t. (breast)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191632(GSM715742)
78genomic small RNA (size selected RNA from t. (breast)		DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR343337SRR189784SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
.................................TACCTGAAGACGGACTTGAC................................................................................................................................................................................................................................................................................................................................................................................................................................. 2012.002.00----------------------------2.00-----------------------------------------------------------------------------------------------
.................................................................GTCCCCGCCTTGTCCTGC................................................................................................................................................................................................................................................................................................................................................................................................... 181.000.00--------------------------------------------------------------------------------------------------------------1.00-------------
........................................................................................................................................................................................................................................................................................................................................................................................GCGGGGGGGTCTGGGCGGG........................................................................... 191.000.00---------------1.00------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................CGGCAGGGTCAGGGAG.......................................................... 1620.500.50------0.50---------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................CCCCCCGCACCTCCT...................................................................................... 1530.330.33--------------------------------------------------------------------------------------------------------------------------0.33-
.................................................................................................................................................................AAGGCCTGGGCTTACA..................................................................................................................................................................................................................................................................................................... 1630.330.33-----------------------------------------0.33----------------------------------------------------------------------------------