ID: uc004fhl.2_intron_5_0_chrX_152722110_r
GENE: (5)
chrX:152722060-152722644-


(2)
AGO2.ip
(1)
B-CELL
(2)
BRAIN
(14)
BREAST
(8)
CELL-LINE
(3)
CERVIX
(3)
LIVER
(1)
OTHER
(8)
SKIN
(1)
UTERUS

Sense strand
TTGCTCGATACCATCCGGAGCCTGACCATTGGGTGCTCCAGTTGCTCGAGGTAAAGGTGTGGATGGCCCAGGTGGGCAGTATTGACGGGCTTCTCTTGGTCCTAGTTCTGGAGCTGGTAGGGGCTGGGGTGTCACTCCCCCTCTGATGCTGGCTGGGGTGTGACACCCCACTTGGGGATCTGGCTGGCCAATCAGGGGCCGGGCAGCATACGGGCAAGGGGCAGCTGTGTCCCAAGGGTGCTGGCTGTTGCCCAAGGCCCCGGGGGTGAGTATGAAGGTGGGATGTGGGCCTCAGAGCAGACGGGCCAGGCACAGAGGAGGGTGAGCACCTAGGGTGCTCCATGGGTGGGTAGGTAGGCGGGCAAAAATGGAGGAGCCAGGGCAGACAGGTGGGGCAGGATTCTGCGCGGTGGGGCTTGTCCTGGCCTCTGTGCCTGGCCCCGATGTGCTTCTGGGGCCTTCCCTGTGGGGCTGAGGGCCTGCTGGGCGAGTGCTCTGGCCTGTGACGGTGTGGCCCTGGGGGCTGCCTTTGCAGCCTGATGGAGCACTTCGAGGACACCAGGGAGAAGAACGAGGCCTTGCTGG
..............................................................................................................................................................................................................................................................................................(((((((((((((...((((((((((((((((((((..(((.((((.(((.((((((..((..((......))..))....))))))..)))...(((((...((...)).....)))))....)))))))..))))..)))))))))))))))).....)))).))))))))).(((.((.((((.....)))))).)))..................................................................................................
............................................................................................................................................................................................................................................................................................285............................................................................................................................................................................................................492...........................................................................................
SizePerfect hitTotal NormPerfect NormTAX577744(Rovira)
total RNA. (breast)
TAX577589(Rovira)
total RNA. (breast)
TAX577743(Rovira)
total RNA. (breast)
TAX577579(Rovira)
total RNA. (breast)
TAX577741(Rovira)
total RNA. (breast)
TAX577746(Rovira)
total RNA. (breast)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
TAX577740(Rovira)
total RNA. (breast)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
TAX577590(Rovira)
total RNA. (breast)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040035(GSM532920)
G001T. (cervix)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
TAX577580(Rovira)
total RNA. (breast)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
TAX577588(Rovira)
total RNA. (breast)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR040037(GSM532922)
G243T. (cervix)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR189785SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR040039(GSM532924)
G531T. (cervix)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577742(Rovira)
total RNA. (breast)
SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
TAX577453(Rovira)
total RNA. (breast)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
.................................................................................................................................................................................................................................................................................................CCTCAGAGCAGACGGGGCG.....................................................................................................................................................................................................................................................................................1948.000.0010.0011.0010.007.005.002.00--1.00-1.00---------------------------1.00--
.................................................................................................................................................................................................................................................................................................CCTCAGAGCAGACGGGGCGA....................................................................................................................................................................................................................................................................................207.000.003.001.00-1.00------1.00--------------------------1.00---
..................................................................................................................................................................................................................................................................................................CTCAGAGCAGACGGGGCG.....................................................................................................................................................................................................................................................................................187.000.003.001.00--1.001.00--1.00--------------------------------
.................................................................................................................................................................................................................................................................................................CCTCAGAGCAGACGGGCC......................................................................................................................................................................................................................................................................................1813.003.001.001.00--1.00------------------------------------
.................................................................................................................................................................................................................................................................................................CCTCAGAGCAGACGGGGT......................................................................................................................................................................................................................................................................................183.000.00--2.001.00-------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGAGAAGAACGAGGCCTT.....2013.003.00-------2.00----------------------------1.00----
.................................................................................................................................................................................................................................................................................................CCTCAGAGCAGACGGGACA.....................................................................................................................................................................................................................................................................................192.000.001.00-1.00--------------------------------------
.................................................................................................................................................................................................................................................................................................CCTCAGAGCAGACGGGGTGG....................................................................................................................................................................................................................................................................................202.000.00--1.001.00-------------------------------------
..................................................................................................................................................................................................................................................................................................CTCAGAGCAGACGGGGCGA....................................................................................................................................................................................................................................................................................192.000.00-2.00---------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGAGGACACCAGGGAGAAGA...............2212.002.00---------2.00-------------------------------
.................................................................................................................................................................................................................................................................................................CCTCAGAGCAGACGGGACG.....................................................................................................................................................................................................................................................................................191.000.001.00----------------------------------------
........................................................................................................................................................................................................................................................................................................................................CCTAGGGTGCTCCATGGGTGGGTAGGTAGGC..................................................................................................................................................................................................................................3111.001.00------------------------------1.00----------
.................................................................................................................................................................................................................................................................................................CCTCAGAGCAGACGGGGCAA....................................................................................................................................................................................................................................................................................201.000.00-1.00---------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCAGGGAGAAGAACGAG..........1911.001.00------1.00----------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGCTGAGGGCCTGCTAGAG.................................................................................................201.000.00--------------1.00--------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGGGAGAAGAACGGAG.........181.000.00---------------------1.00-------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGACACCAGGGAGAAGAACGAGGC........2611.001.00--------------------1.00--------------------
.................................................................................................................................................................................................................................................................................................CCTCAGAGCAGACGGGCCGG....................................................................................................................................................................................................................................................................................2011.003.00----1.00------------------------------------
.................................................................................................................................................................................................................................................................................................CCTCAGAGCAGACGGGC.......................................................................................................................................................................................................................................................................................1711.001.001.00----------------------------------------
................................................................................................................................................................................................CAGGGGCCGGGCAGCAGAC......................................................................................................................................................................................................................................................................................................................................................................................191.000.00------------------1.00----------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGATGGAGCACTTCGAGGACA...........................2211.001.00-----------------------------------1.00-----
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATGGAGCACTTCGAGGACACCAGGGAGAAGA...............3311.001.00---------------1.00-------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGTGTGGCCCTGGGGGCAACG.........................................................221.000.00------------1.00----------------------------
..............................................................................................................................................................................................................................................................................................................................................................................AATGGAGGAGCCAGGGCAAAC......................................................................................................................................................................................................211.000.00-----------------------1.00-----------------
.................................................................................................................................................................................................................................................................................................CCTCAGAGCAGACGGGTCGT....................................................................................................................................................................................................................................................................................201.000.00--1.00--------------------------------------
..........................................................................GGCAGTATTGACGGGCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.001.00---------------------------------1.00-------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCCTGATGGAGCACCT...................................181.000.00------1.00----------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGCTGGGCGAGTGCTCTGGCAAT..................................................................................251.000.00--------------------------1.00--------------
.......................GACCATTGGGTGCTCCAGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001.00-----------1.00-----------------------------
.................................................................................................................................................................................................................................................................................................CCTCAGAGCAGACGGGACC.....................................................................................................................................................................................................................................................................................191.000.00--1.00--------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAGGGAGAAGAACGGCG.........191.000.00---------------------------1.00-------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGAGAAGAACGAGGCCTG.....2011.001.00-------1.00---------------------------------
.................................................................................................................................................................................................................................................................................................CCTCAGAGCAGACGGGGTGA....................................................................................................................................................................................................................................................................................201.000.00---1.00-------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGAGAAGAACGAGGCCT......1911.001.00----------------1.00------------------------
.................................................................................................................................................................................................................................................................................................CCTCAGAGCAGACGGGGG......................................................................................................................................................................................................................................................................................181.000.00-1.00---------------------------------------
..........................................................................................................................................................................................................................................................................................ATGTGGGCCTCAGAGGGG.............................................................................................................................................................................................................................................................................................181.000.00------------1.00----------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCACTTCGAGGACACCA........................1811.001.00---------------------------------------1.00-
.............................................................................................................................................................................................................................................................................................TGGGCCTCAGAGCAGACGT.........................................................................................................................................................................................................................................................................................191.000.00---1.00-------------------------------------
....TCGATACCATCCGGAGCCTGACCATTGGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001.00------------------------1.00----------------
..............................................................ATGGCCCAGGTGGGCACTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................191.000.00----------------------------------1.00------
.................................................................................................................................................................................................................................................................................................CCTCAGAGCAGACGGGCCAGGC..................................................................................................................................................................................................................................................................................2211.001.00-------------1.00---------------------------
.................................................................................................................................................................................................................................................................................................CCTCAGAGCAGACGGGGCGG....................................................................................................................................................................................................................................................................................201.000.00----1.00------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCTGATGGAGCACCTGA.................................191.000.00------1.00----------------------------------
............................................................................................................................TGGGGTGTCACTCCCCAGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................191.000.00-----------------------------1.00-----------
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGCCTGCTGGGCGAGCTA...........................................................................................191.000.00-------------------------1.00---------------
..................................................................................................................................................................................................................................................................................................CTCAGAGCAGACGGGGTGA....................................................................................................................................................................................................................................................................................191.000.00-------------------------------1.00---------
.................................................................................................................................................................................................................................................................................................CCTCAGAGCAGACGGGAC......................................................................................................................................................................................................................................................................................181.000.00--1.00--------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGGGAGAAGAACGAGGC........1911.001.00-----------1.00-----------------------------
.....................................................................AGGTGGGCAGTATTGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1620.500.50-------------0.50---------------------------
.................................................................................................................................................................................................................................................................................................CCTCAGAGCAGACGGTGCT.....................................................................................................................................................................................................................................................................................1980.120.12---0.12-------------------------------------
.................................................................................................................................................................................................................................................................................................CCTCAGAGCAGACGG.........................................................................................................................................................................................................................................................................................1580.120.12----------------------------------------0.12
.................................................................................................................................................................................................................................................................................................CCTCAGAGCAGACGGTCCA.....................................................................................................................................................................................................................................................................................1980.120.12---0.12-------------------------------------
.................................................................................................................................................................................................................................................................................................CCTCAGAGCAGACGGAGCG.....................................................................................................................................................................................................................................................................................1980.120.120.12----------------------------------------
.................................................................................................................................................................................................................................................................................................CCTCAGAGCAGACGGAGC......................................................................................................................................................................................................................................................................................1880.120.120.12----------------------------------------
.................................................................................................................................................................................................................................................................................................CCTCAGAGCAGACGGTTCG.....................................................................................................................................................................................................................................................................................1980.120.12--------0.12--------------------------------

Antisense strand
TTGCTCGATACCATCCGGAGCCTGACCATTGGGTGCTCCAGTTGCTCGAGGTAAAGGTGTGGATGGCCCAGGTGGGCAGTATTGACGGGCTTCTCTTGGTCCTAGTTCTGGAGCTGGTAGGGGCTGGGGTGTCACTCCCCCTCTGATGCTGGCTGGGGTGTGACACCCCACTTGGGGATCTGGCTGGCCAATCAGGGGCCGGGCAGCATACGGGCAAGGGGCAGCTGTGTCCCAAGGGTGCTGGCTGTTGCCCAAGGCCCCGGGGGTGAGTATGAAGGTGGGATGTGGGCCTCAGAGCAGACGGGCCAGGCACAGAGGAGGGTGAGCACCTAGGGTGCTCCATGGGTGGGTAGGTAGGCGGGCAAAAATGGAGGAGCCAGGGCAGACAGGTGGGGCAGGATTCTGCGCGGTGGGGCTTGTCCTGGCCTCTGTGCCTGGCCCCGATGTGCTTCTGGGGCCTTCCCTGTGGGGCTGAGGGCCTGCTGGGCGAGTGCTCTGGCCTGTGACGGTGTGGCCCTGGGGGCTGCCTTTGCAGCCTGATGGAGCACTTCGAGGACACCAGGGAGAAGAACGAGGCCTTGCTGG
..............................................................................................................................................................................................................................................................................................(((((((((((((...((((((((((((((((((((..(((.((((.(((.((((((..((..((......))..))....))))))..)))...(((((...((...)).....)))))....)))))))..))))..)))))))))))))))).....)))).))))))))).(((.((.((((.....)))))).)))..................................................................................................
............................................................................................................................................................................................................................................................................................285............................................................................................................................................................................................................492...........................................................................................
SizePerfect hitTotal NormPerfect NormTAX577744(Rovira)
total RNA. (breast)
TAX577589(Rovira)
total RNA. (breast)
TAX577743(Rovira)
total RNA. (breast)
TAX577579(Rovira)
total RNA. (breast)
TAX577741(Rovira)
total RNA. (breast)
TAX577746(Rovira)
total RNA. (breast)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
TAX577740(Rovira)
total RNA. (breast)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
TAX577590(Rovira)
total RNA. (breast)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040035(GSM532920)
G001T. (cervix)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
TAX577580(Rovira)
total RNA. (breast)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
TAX577588(Rovira)
total RNA. (breast)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR040037(GSM532922)
G243T. (cervix)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR189785SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR040039(GSM532924)
G531T. (cervix)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577742(Rovira)
total RNA. (breast)
SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
TAX577453(Rovira)
total RNA. (breast)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
.......................................................................................................................................................................................................................................................................................................................................................................................................................CAGGACAAGCCCCACCG................................................................................................................................................................. 1721.001.00-----------------1.00-----------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGGACACCAGGGATGGT................ 191.000.00-------------------1.00---------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCCGATGTGCTTCTGTTTC............................................................................................................................... 201.000.00----------------------------1.00------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCTGGGGGCTGCCTGGG..................................................... 181.000.00--------------------------------1.00--------
.............................................................................................TCTTGGTCCTAGTTCCCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 181.000.00----------------------1.00------------------