ID: uc004fco.2_intron_4_0_chrX_147924527_f
GENE: (5)
chrX:147924477-147924955+


(2)
B-CELL
(2)
BRAIN
(1)
BREAST
(10)
CELL-LINE
(3)
HEART
(1)
OTHER
(3)
SKIN

Sense strand
TTATTCCTTATAGGAATCGCAGCATCTGACCCCAGGATTCACCTTACAAAGTAAGTGGTTTTGAAAATCCTTCTTAGTCCAAACATCCATGTCCTCTGCTCCCTCATTTTTTCCTTTTTCCTACTTAAAATCATTAAAACATGAAAGAACAACAATAACAAAAAGTTATTTTAATTGTTAATTTTTAGCTCTCAGAAATAAGTGAGAAGATGTAAAGTTTGTCTTTCTGTATCTGGCCTTTTTCACTTAACATAATGACTTCCAGTCCCGTGATATATCTAACTGGTTCCCCCCCTTTTTTTTTTTTAATCTGTTACTTATCTCAAGAAGGTAACTCGGGGGACTGCATGTTTGGAGATCAATTTAATTCAGAATAATCATTTGACAGTAGGAACATGAACAGTAATTGTTTATATCTTTTCTTTTCAGAGTGGAATGACCCAACCACCAGAGCTTCTACAAAGTCAGTGTCTTTCAAA
...................................................................................................................................................................................................................................(((((((((....................(((.....)))))).))))))..((((.((((...................)))).))))...................................................................................................................................................................
..............................................................................................................................................................................................................................223..............................................................................................320.............................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR343335SRR343334SRR037937(GSM510475)
293cand2. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR189784SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR189785SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
.....................................................................................................................................................................................................................................................................................................CCTTTTTTTTTTTTAATCTACTG...................................................................................................................................................................23369.000.00175.00166.0015.0013.00----------------------
....................................................................................................................................................................................................................................................................................................CCCTTTTTTTTTTTTAATCTACTG...................................................................................................................................................................2421.000.0014.004.001.002.00----------------------
.....................................................................................................................................................................................................................................................................................................CCTTTTTTTTTTTTAATCTACTT...................................................................................................................................................................2312.000.005.007.00------------------------
.....................................................................................................................................................................................................................................................................................................CCTTTTTTTTTTTTAATCTACT....................................................................................................................................................................229.000.003.006.00------------------------
.....................................................................................................................................................................................................................................................................................................CCTTTTTTTTTTTTAATCTCCTG...................................................................................................................................................................238.000.003.004.001.00-----------------------
....................................................................................................................................................................................................................................................................................................CCCTTTTTTTTTTTTAACCTG......................................................................................................................................................................217.000.00-3.001.003.00----------------------
.....................................................................................................................................................................................................................................................................................................CCTTTTTTTTTTTTAATCTATTG...................................................................................................................................................................236.000.003.002.001.00-----------------------
.....................................................................................................................................................................................................................................................................................................CCTTTTTTTTTTTTAATCTACGG...................................................................................................................................................................236.000.001.004.00-1.00----------------------
.....................................................................................................................................................................................................................................................................................................CCTTTTTTTTTTTTAATCTAC.....................................................................................................................................................................214.000.00-3.001.00-----------------------
....................................................................................................................................................................................................................................................................................................CCCTTTTTTTTTTTTAATCTACTT...................................................................................................................................................................243.000.002.001.00------------------------
.....................................................................................................................................................................................................................................................................................................CCTTTTTTTTTTTTAATCTTCTG...................................................................................................................................................................233.000.001.001.001.00-----------------------
.....................................................................................................................................................................................................................................................................................................CCTTTTTTTTTTTTAATCTACTA...................................................................................................................................................................232.000.00-2.00------------------------
...................................................................................................................................................................................................................................TGTATCTGGCCTTTTTTTTC........................................................................................................................................................................................................................................202.000.00----2.00---------------------
....................................................................................................................................................................................................................................................................................................CCCTTTTTTTTTTTTAATCTAATG...................................................................................................................................................................242.000.00-1.00-1.00----------------------
..................................................................................................CTCCCTCATTTTTTCCCGG..........................................................................................................................................................................................................................................................................................................................................................................192.000.00--------2.00-----------------
.....................................................................................................................................................................................................................................................................................................CCTTTTTTTTTTTTAATCTACCG...................................................................................................................................................................232.000.001.001.00------------------------
.....................................................................................................................................................................................................................................................................................................CCTTTTTTTTTTTTAATCTCCGG...................................................................................................................................................................232.000.00-2.00------------------------
....................................................................................................................................................................................................................................................................................................CCCTTTTTTTTTTTTAATCTACT....................................................................................................................................................................232.000.001.001.00------------------------
..................................................................................................................................................................................................................................................................................................CCCCCTTTTTTTTTTTTAACA........................................................................................................................................................................211.000.00-1.00------------------------
..................GCAGCATCTGACCCCAGGATTCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001.00-------------------1.00------
.....................................................................................................................................................................................................................................................................................................CCTTTTTTTTTTTTAATCTACAG...................................................................................................................................................................231.000.001.00-------------------------
...................................................................................................................................................................................................................................................................................................CCCCTTTTTTTTTTTTAATCTATTG...................................................................................................................................................................251.000.001.00-------------------------
..................................................................................................CTCCCTCATTTTTTCCCG...........................................................................................................................................................................................................................................................................................................................................................................181.000.00--------1.00-----------------
..............................................................................................................................................................CAAAAAGTTATTTTAATTAA.............................................................................................................................................................................................................................................................................................................201.000.00---------------1.00----------
.....................................................................................................................................................................................................................................................................................................CCTTTTTTTTTTTTAATCTCTGT...................................................................................................................................................................231.000.00-1.00------------------------
................................................................................................................................................................................................................................................................................................CCCCCCCTTTTTTTTTTTTAAGCCC......................................................................................................................................................................251.000.00----1.00---------------------
....................................................................................................................................................................................................................................................................................................CCCTTTTTTTTTTTTAATCTACGG...................................................................................................................................................................241.000.00--1.00-----------------------
....................................................................................................................................................................................................................................................................................................CCCTTTTTTTTTTTTAATCTCCTG...................................................................................................................................................................241.000.001.00-------------------------
..................................................................................................................................................................................................................................................................................................................................................GGGGACTGCATGTTTCTGC..........................................................................................................................191.000.00----------1.00---------------
..................................................................................................................................................................................................................................................................................................CCCCCTTTTTTTTTTTTCATG........................................................................................................................................................................211.000.00-1.00------------------------
.....................................................................................................CCTCATTTTTTCCTTCG.........................................................................................................................................................................................................................................................................................................................................................................171.000.00-----1.00--------------------
....................................................................................................................................................................................................................................................................................................CCCTTTTTTTTTTTTATATG.......................................................................................................................................................................201.000.001.00-------------------------
................................................................................................................................................................................................................................................................................................CCCCCCCTTTTTTTTTTTTACTT........................................................................................................................................................................231.000.00---1.00----------------------
...................................................................................................................................................................................................................................................................................................CCCCTTTTTTTTTTTTAATCTACTG...................................................................................................................................................................251.000.001.00-------------------------
.........................................................................................................ATTTTTTCCTTTTTCCTGGAG.................................................................................................................................................................................................................................................................................................................................................................211.000.00---------1.00----------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................TATATCTTTTCTTTTAGTA.................................................191.000.00-----1.00--------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTTCTTTTCAGAGTAGGG...........................................211.000.00---------1.00----------------
..................................................................................................................................................................................................................................................................................................................................................................................................AGTAGGAACATGAACTCTG..........................................................................191.000.00--------------------1.00-----
......................................................................................................CTCATTTTTTCCTTTTTCCATAA..................................................................................................................................................................................................................................................................................................................................................................231.000.00-1.00------------------------
....................................................................................................................................................................................................................................................................................................CCCTTTTTTTTTTTTAACCAC......................................................................................................................................................................211.000.00-1.00------------------------
..............................................................................................................................................................................................................................................................................................TTCCCCCCCTTTTTTTTTTTTCTAT........................................................................................................................................................................251.000.00--1.00-----------------------
................TCGCAGCATCTGACCTCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................191.000.00-----------1.00--------------
....................................................................................................................................................................................................................................................................................................CCCTTTTTTTTTTTTAATCTACTA...................................................................................................................................................................241.000.00--1.00-----------------------
.......................ATCTGACCCCAGGATTCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00----------------------1.00---
..........................................................................................................TTTTTTCCTTTTTCCTAAGT.................................................................................................................................................................................................................................................................................................................................................................201.000.00-----1.00--------------------
.......................................................................................................................................................................................................................................................................................................TTTTTTTTTTTTAATCTGTTACTTTTCC............................................................................................................................................................281.000.00----1.00---------------------
..................................................................................................CTCCCTCATTTTTTCCTTTTTC.......................................................................................................................................................................................................................................................................................................................................................................2211.001.00-----1.00--------------------
.....................................................................................................................................................................................................................................................................................................CCTTTTTTTTTTTTAATCTG......................................................................................................................................................................2090.110.110.11-------------------------

Antisense strand
TTATTCCTTATAGGAATCGCAGCATCTGACCCCAGGATTCACCTTACAAAGTAAGTGGTTTTGAAAATCCTTCTTAGTCCAAACATCCATGTCCTCTGCTCCCTCATTTTTTCCTTTTTCCTACTTAAAATCATTAAAACATGAAAGAACAACAATAACAAAAAGTTATTTTAATTGTTAATTTTTAGCTCTCAGAAATAAGTGAGAAGATGTAAAGTTTGTCTTTCTGTATCTGGCCTTTTTCACTTAACATAATGACTTCCAGTCCCGTGATATATCTAACTGGTTCCCCCCCTTTTTTTTTTTTAATCTGTTACTTATCTCAAGAAGGTAACTCGGGGGACTGCATGTTTGGAGATCAATTTAATTCAGAATAATCATTTGACAGTAGGAACATGAACAGTAATTGTTTATATCTTTTCTTTTCAGAGTGGAATGACCCAACCACCAGAGCTTCTACAAAGTCAGTGTCTTTCAAA
...................................................................................................................................................................................................................................(((((((((....................(((.....)))))).))))))..((((.((((...................)))).))))...................................................................................................................................................................
..............................................................................................................................................................................................................................223..............................................................................................320.............................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR343335SRR343334SRR037937(GSM510475)
293cand2. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR189784SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR189785SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
...............................................................................................................................................................................................................................................................................................................................................................................................................ACAGTAATTGTTTATAATG............................................................. 194.000.00------2.002.00------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTACAAAGTCAGTAAAC...... 192.000.00------2.00-------------------
...............................................................................................................................................................................................................................................................TGACTTCCAGTCCCGTCTCC............................................................................................................................................................................................................ 202.000.00----2.00---------------------
.........................................................................................TGTCCTCTGCTCCCTCACCAG................................................................................................................................................................................................................................................................................................................................................................................. 211.000.00------------------1.00-------
.................................................................AATCCTTCTTAGTCCAAACATCCTG..................................................................................................................................................................................................................................................................................................................................................................................................... 251.000.00--------------1.00-----------
.......................................................................................................................................................................................................................AGTTTGTCTTTCTGTACG...................................................................................................................................................................................................................................................... 181.000.00-----------------1.00--------
.............................................................................................................................TAAAATCATTAAAACAGGCA.............................................................................................................................................................................................................................................................................................................................................. 201.000.00-----1.00--------------------
....................................................AAGTGGTTTTGAAAATGA......................................................................................................................................................................................................................................................................................................................................................................................................................... 181.000.00-------1.00------------------
.........................................................................................TGTCCTCTGCTCCCTCAAAG.................................................................................................................................................................................................................................................................................................................................................................................. 201.000.00------------1.00-------------
...................................................................TCCTTCTTAGTCCAACT........................................................................................................................................................................................................................................................................................................................................................................................................... 171.000.00---------------------1.00----
............................................................................................................................................................................................................................................CCTTTTTCACTTAACATGT................................................................................................................................................................................................................................ 191.000.00----------------1.00---------
..........................................................................................................................................................................................................................................................................................CTGGTTCCCCCCCTTAAGA.................................................................................................................................................................................. 191.000.00---------1.00----------------
................................................................................................................................................................................................................................................................................................................................................................................TCAGAATAATCATTTGGCC............................................................................................ 191.000.00-------------1.00------------
.........................................................................................ATGAGGGAGCAGAGGACA.................................................................................................................................................................................................................................................................................................................................................................................... 1820.500.50-----------------------0.50--
...................................................................................................................................................................................................................................................................................GGAACCAGTTAGATA............................................................................................................................................................................................. 1550.200.20------------------------0.20-
..........................................................................................TGAGGGAGCAGAGGAC..................................................................................................................................................................................................................................................................................................................................................................................... 1670.140.14-------------------------0.14