ID: uc004exj.2_intron_9_0_chrX_133559361_f
GENE: (10)
chrX:133559311-133559740+


(1)
AGO1.ip OTHER.mut 		(7)
B-CELL 		(4)
BRAIN 		(1)
BREAST 		(17)
CELL-LINE 		(1)
CERVIX 		(3)
HEART 		(1)
HELA 		(1)
KIDNEY 		(4)
LIVER 		(2)
OTHER 		(6)
SKIN 		(1)
TESTES 		(1)
XRN.ip

Sense strand
TAGAAATTGATCAGCAACAACTAACTCAGCAGCAACTTAATGGAAACTAGGTATGAAAGTTAATTATATGGGATCTGTTGTCAGGATACAATACACACTGATATATACATGTTGAAGTAATGGTATGCAGTAAGATTTTTTTTAATCCTATTATGTTTAGTTAAGAGCATGTTACTAAAATGCTGAGGATTTTGTAGGCTTGCATAGTAGTTGTTTTTTAACTAGCTGATTTTGTAACCATAAAAACAAGCTATCTGCTTTATCAATAAGTGTAGTTGTAATGTCAAATCAATAAGATATTCACACTCCTCAATAACATTATATTGATTGTGTTCCCCTCAAGCATCATATTTTACATTTTTTTATCATCTTTTAAACAGGTTCATGGGACAGAGTTAGAAAACTGGGAATGAATAAGACATCCATAACT
..............................................................................((.((((.(((((.....((((.(((((.(((.........))))))))))))............((((((......((((((............))))))......)))))))))))..))))))..................................................................................................................................................................................................................................
.............................................................................78.................................................................................................................................209...........................................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR343336SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR343337SRR189784SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR189785SRR189783SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR343334SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR037936(GSM510474)
293cand1. (cell line)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR189787GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191566(GSM715676)
94genomic small RNA (size selected RNA from t. (breast)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037937(GSM510475)
293cand2. (cell line)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR553576(SRX182782)
source: Testis. (testes)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR040035(GSM532920)
G001T. (cervix)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
..................................................................................AGGATACAATACACACTGA.........................................................................................................................................................................................................................................................................................................................................19114.0014.00-13.00------------------------------------1.00-----------------
...............................................................................................................................................................................................................................................................................................................................................................................................CATGGGACAGAGTTAGAA.............................1816.006.00-6.00------------------------------------------------------
..............CAACAACTAACTCAGCAGCAACTTAATG....................................................................................................................................................................................................................................................................................................................................................................................................2816.006.003.00-------------3.00-----------------------------------------
.......................................................................................................................................................................................TGAGGATTTTGTAGGCTTGCAT.................................................................................................................................................................................................................................2215.005.00--------5.00-----------------------------------------------
.............................................................................................................................................................................................TTTTGTAGGCTTGCATCCA..............................................................................................................................................................................................................................193.000.00---1.00-2.00--------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................CATATTTTACATTTTTTTATCATCTTTTAAACAG..................................................3413.003.00-----------2.00----1.00---------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................CATCATATTTTACATTTTTTTATCATCTTTAA.......................................................322.000.00----------2.00---------------------------------------------
...........................................................TTAATTATATGGGATCTGTTGTCAGGATAC.....................................................................................................................................................................................................................................................................................................................................................3012.002.002.00-------------------------------------------------------
.....................................................................................ATACAATACACACTGATATATACATG...............................................................................................................................................................................................................................................................................................................................2612.002.002.00-------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................AACTGGGAATGAATAAGACAT........2112.002.00------------------2.00-------------------------------------
................................................................................................................TGAAGTAATGGTATGCAGTAAG........................................................................................................................................................................................................................................................................................................2212.002.00-------2.00------------------------------------------------
...........................................................TTAATTATATGGGATCTGTTGTCAGGAT.......................................................................................................................................................................................................................................................................................................................................................2812.002.002.00-------------------------------------------------------
........................................................................................................................................................................................................................................................................................................ATATTCACACTCCTCAATAACATTATATTG........................................................................................................3012.002.00-------------2.00------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................TTTTTATCATCTTTTAATAG...................................................202.000.00----------------1.001.00--------------------------------------
...............................................................................GTCAGGATACAATACACACC...........................................................................................................................................................................................................................................................................................................................................2012.002.00------2.00-------------------------------------------------
...............AACAACTAACTCAGCAGCA............................................................................................................................................................................................................................................................................................................................................................................................................1912.002.00-------------------2.00------------------------------------
.....................................................................................ATACAATACACACTGATATATA...................................................................................................................................................................................................................................................................................................................................2212.002.002.00-------------------------------------------------------
...............................................................................GTCAGGATACAATACACAC............................................................................................................................................................................................................................................................................................................................................1912.002.00------2.00-------------------------------------------------
..............................................................................................................................................................................................TTTGTAGGCTTGCATAGTAGTTGTTTTTT...................................................................................................................................................................................................................2912.002.00----2.00---------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................AGAAAACTGGGAATGAATA..............1912.002.00----------------------2.00---------------------------------
............................................................TAATTATATGGGATCTGTTGTCAGGAT.......................................................................................................................................................................................................................................................................................................................................................2711.001.001.00-------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................GAAAACTGGGAATGAATAAGAC..........2211.001.00--------------------1.00-----------------------------------
..........................................................................................................................................................GTTTAGTTAAGAGCATTTC.................................................................................................................................................................................................................................................................191.000.00----------------------------------------------------1.00---
................................................................................................................................................................................................................................................................................................................................................................................................ATGGGACAGAGTTAGAAAACCGGG......................241.000.00-------1.00------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................GAAAACTGGGAATGAATAAGACATCC......2611.001.00------------1.00-------------------------------------------
................................................................................................................................................................TTAAGAGCATGTTACTAAAATGCTGAGGACT...............................................................................................................................................................................................................................................311.000.00--1.00-----------------------------------------------------
..........................................................................CTGTTGTCAGGATACAATACACACTG..........................................................................................................................................................................................................................................................................................................................................2611.001.001.00-------------------------------------------------------
..................................................................TATGGGATCTGTTGTCAGGATACA....................................................................................................................................................................................................................................................................................................................................................2411.001.00------------1.00-------------------------------------------
.............................................................................................................................................................................................................................CTAGCTGATTTTGTAACCATAAAAACA......................................................................................................................................................................................2711.001.001.00-------------------------------------------------------
.....................................................................................ATACAATACACACTGATATATACATGTTGAAG.........................................................................................................................................................................................................................................................................................................................3211.001.00------1.00-------------------------------------------------
........................................................................................................................................................................................................................................................................................................ATATTCACACTCCTCAATAACA................................................................................................................2211.001.00--1.00-----------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................CATTTTTTTATCATCTTTTA.......................................................2011.001.00----------1.00---------------------------------------------
...........................................................................................................................................................................TTACTAAAATGCTGAGGATC...............................................................................................................................................................................................................................................201.000.00--1.00-----------------------------------------------------
.......................................................................................................................................................................CATGTTACTAAAATGCTGAGGATC...............................................................................................................................................................................................................................................241.000.00--1.00-----------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................TATCATCTTTTAAACAG..................................................1721.001.00-----------0.50-----0.50--------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................AGAGTTAGAAAACTGGGAATGAATA..............2511.001.00----------------------------------1.00---------------------
..........................................................................................................................................................................................................................................................................................................................................................................................AGGTTCATGGGACAGAGTTAGAAAACT.........................2711.001.00---------------------1.00----------------------------------
.......................................................................................................................................................................................................TTGCATAGTAGTTGTATTG....................................................................................................................................................................................................................191.000.001.00-------------------------------------------------------
.........ATCAGCAACAACTAACTCAGCAGCAACTTAACG....................................................................................................................................................................................................................................................................................................................................................................................................331.000.00--1.00-----------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................TAGAAAACTGGGAATGAATAAGACATCCATA...3111.001.00----------------------------1.00---------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................TAGAAAACTGGGAATGAATAAGACAT........2611.001.00-----------------------------1.00--------------------------
...........................................................TTAATTATATGGGATCTG.................................................................................................................................................................................................................................................................................................................................................................1811.001.00------1.00-------------------------------------------------
...........................................................................................................................................................................TTACTAAAATGCTGAGGATT...............................................................................................................................................................................................................................................2011.001.00--1.00-----------------------------------------------------
...............AACAACTAACTCAGCAGCAACTTA.......................................................................................................................................................................................................................................................................................................................................................................................................2411.001.00--------------------1.00-----------------------------------
...............................................................................GTCAGGATACAATACACACTG..........................................................................................................................................................................................................................................................................................................................................2111.001.001.00-------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................AGAAAACTGGGAATGAATAAGACAT........2511.001.00-------------------------1.00------------------------------
.......................................................................................................................................................................................TGAGGATTTTGTAGGCTTTCCT.................................................................................................................................................................................................................................221.000.00--------1.00-----------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................TGGGACAGAGTTAGAAAAC..........................1911.001.00------------------------------1.00-------------------------
.......................ACTCAGCAGCAACTTAATGGA..................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00--------------------------1.00-----------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................CATGGGACAGAGTTAGAAAAC..........................2111.001.00--------------------------------------------1.00-----------
.........................................................................................................................................................................................AGGATTTTGTAGGCTTGCATAGTAGCTGT........................................................................................................................................................................................................................291.000.00----1.00---------------------------------------------------
......................................................................................................................................ATTTTTTTTAATCCTATTATG...................................................................................................................................................................................................................................................................................2111.001.00-------------1.00------------------------------------------
............................................................................................................................................TTTAATCCTATTATGTTTAGTTAAGAGC......................................................................................................................................................................................................................................................................2811.001.00-------1.00------------------------------------------------
......TTGATCAGCAACAACTAACTCAGCAGCAACTTAATGGAAACTAG............................................................................................................................................................................................................................................................................................................................................................................................4411.001.00---------------------------------------------1.00----------
.................................................................................................................................................................................AAATGCTGAGGATTTTGTAGGCT......................................................................................................................................................................................................................................2311.001.00-------1.00------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................AACAGGTTCATGGGACAGAGCTAG...............................241.000.00-------1.00------------------------------------------------
.....ATTGATCAGCAACAACTAACTC...................................................................................................................................................................................................................................................................................................................................................................................................................2211.001.00---------1.00----------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................GTTAGAAAACTGGGAATGAAT...............2111.001.00---------------------------------1.00----------------------
............................................................................................................................................................................................................................................................................................................................................................................................................TAGAAAACTGGGAATGAATAAGA...........2311.001.00---------------------------------------------------1.00----
...................................................................................................................................................................................ATGCTGAGGATTTTGTAGGCTTGCATAG...............................................................................................................................................................................................................................2811.001.00----1.00---------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................AGAAAACTGGGAATGAATAA.............2011.001.00---------1.00----------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................TTAGAAAACTGGGAATGAATAAGACATC.......2811.001.00----------------------------------------------1.00---------
.......................................................................................................................................................................................................................................................................................................................................................CATCATATTTTACATTTTTTTATCATCTTTTAA......................................................3311.001.00-----------1.00--------------------------------------------
................................................................................................................................................................................................................................................................................................TCAATAAGATATTCACACTCCTCAATAACA................................................................................................................3011.001.00------1.00-------------------------------------------------
.......................................................................................................................................................................................................TTGCATAGTAGTTGTTACG....................................................................................................................................................................................................................191.000.001.00-------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................AGAAAACTGGGAATGAAT...............1811.001.00--------------------------------------------------1.00-----
...........................................................................................................................................................................................................................................................................................................................................................ATATTTTACATTTTTTTATCATCTTCT........................................................271.000.00----1.00---------------------------------------------------
......................AACTCAGCAGCAACTTAATGGAAAC...............................................................................................................................................................................................................................................................................................................................................................................................2511.001.00------------1.00-------------------------------------------
............................................................TAATTATATGGGATCTGTTGTCAGGATAC.....................................................................................................................................................................................................................................................................................................................................................2911.001.001.00-------------------------------------------------------
...AAATTGATCAGCAACAACTAACTCAACG...............................................................................................................................................................................................................................................................................................................................................................................................................281.000.00--1.00-----------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................CTGGGAATGAATAAGACAT........1911.001.00-----------------------------------------------------1.00--
..........................................................................................................................................................................................................................................................................................................................................................CATATTTTACATTTTTTTATCATCTTTTAAACA...................................................3311.001.00----------1.00---------------------------------------------
....................................................................................................ATATATACATGTTGAAAATG......................................................................................................................................................................................................................................................................................................................201.000.00------1.00-------------------------------------------------
......................................................................................................................................ATTTTTTTTAATCCTATTATGTTTAGTCAAG.........................................................................................................................................................................................................................................................................311.000.00--1.00-----------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................GGGAATGAATAAGACATCC......1911.001.00------------------------------------1.00-------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................AGAGTTAGAAAACTGGGTAGG..................211.000.00-------------------------------1.00------------------------
............................................................................................................................................................................................ATTTTGTAGGCTTGCATAGTAGTTGTTTTTC...................................................................................................................................................................................................................311.000.00----1.00---------------------------------------------------
..................................................................................AGGATACAATACACACTGATATA.....................................................................................................................................................................................................................................................................................................................................2311.001.00---------1.00----------------------------------------------
.............................................................................................................................................................................ACTAAAATGCTGAGGATTTT.............................................................................................................................................................................................................................................2011.001.001.00-------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................CATCATATTTTACATTTTTTTATCACCTT..........................................................291.000.00----------------1.00---------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................TGGGAATGAATAAGACATC.......1911.001.00-1.00------------------------------------------------------
...............................................................................................................................................................................................TTGTAGGCTTGCATAGTAGTTGTTTTTT...................................................................................................................................................................................................................2811.001.00-------1.00------------------------------------------------
.....................................................................................ATACAATACACACTGATATATACAT................................................................................................................................................................................................................................................................................................................................2511.001.001.00-------------------------------------------------------
.....................................................................GGGATCTGTTGTCAGGATACAATAC................................................................................................................................................................................................................................................................................................................................................2511.001.00---------1.00----------------------------------------------
........................................................................................................................................................................................GAGGATTTTGTAGGCTTGCATA................................................................................................................................................................................................................................2211.001.00---------1.00----------------------------------------------
.....................................................................GGGATCTGTTGTCAGGATA......................................................................................................................................................................................................................................................................................................................................................1911.001.00-----------------------------------1.00--------------------
....................................................................................................................................................................................................................................................................................................................................................................ATTTTTTTATCATCTTTTAAACAG..................................................2411.001.00----1.00---------------------------------------------------
................................................................................................................................................................TTAAGAGCATGTTACTAAAATGCTGAGG..................................................................................................................................................................................................................................................2811.001.00------------------------1.00-------------------------------
...............................................................................................................................................................................................................................AGCTGATTTTGTAACCAT.............................................................................................................................................................................................1821.001.00------------------------------------------------1.00-------
....AATTGATCAGCAACAACTAACTCAGCAG..............................................................................................................................................................................................................................................................................................................................................................................................................2811.001.00---------------------1.00----------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................AAACTGGGAATGAATAAGACAT........2211.001.00------------------------------------------1.00-------------
......................................................................................................................................................................................CTGAGGATTTTGTAGGCTTGCATAGTAGTCG.........................................................................................................................................................................................................................311.000.00--1.00-----------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................GGGACAGAGTTAGAAAACTGGGAATGA.................2711.001.00-------------------------------------------1.00------------
.........................................................................................................................................................................................AGGATTTTGTAGGCTCTG...................................................................................................................................................................................................................................181.000.00---------------------------------------1.00----------------
..................................................................................................................................................................................................................................................................................................................................................................................................GGGACAGAGTTAGAAAACTGGGA.....................2311.001.00-----------------------------------------------1.00--------
...................................................................................................................................................................................................................................................................................................................................................................CATTTTTTTATCATCTTTTAAACA...................................................2411.001.00----------1.00---------------------------------------------
.........................................................................................................................................................................TGTTACTAAAATGCTGAGGAT................................................................................................................................................................................................................................................2111.001.00----1.00---------------------------------------------------
.......................................................................................................................................................................................................................................................................CAATAAGTGTAGTTGTAATGTC.................................................................................................................................................2211.001.00---------------------------1.00----------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................AACAGGTTCATGGGACAGAGTTAG...............................2411.001.00-------1.00------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................AAAACTGGGAATGAATAAGACATCC......2511.001.00------------1.00-------------------------------------------
..............................................................................................................................................................................................TTTGTAGGCTTGCATAGTAGTTGTT.......................................................................................................................................................................................................................2511.001.00--------------------------------1.00-----------------------
.............................................................................................................................................................................................TTTTGTAGGCTTGCATAGTAGTTGTTTTTT...................................................................................................................................................................................................................3011.001.00----1.00---------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................AGAAAACTGGGAATGAATAG.............2011.002.00-------------------------------------------------1.00------
............................................................TAATTATATGGGATCTGTTGTCAGGATA......................................................................................................................................................................................................................................................................................................................................................2811.001.001.00-------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................ATATTTTACATTTTTTTATCATCTTTTAAACAG..................................................3311.001.00-----------1.00--------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................ATTTTACATTTTTTTATCATCTTTTAAACAG..................................................3111.001.00-----------------1.00--------------------------------------
.....................................................................................................................................................................................................GCTTGCATAGTAGTTGTTTTTTAACTAGCTG..........................................................................................................................................................................................................3111.001.00---------------1.00----------------------------------------
..........................CAGCAGCAACTTAATGGAAACTAGG...........................................................................................................................................................................................................................................................................................................................................................................................2511.001.00----------------------------------------1.00---------------
.............................................................................TTGTCAGGATACAATACACACT...........................................................................................................................................................................................................................................................................................................................................2211.001.001.00-------------------------------------------------------
.............................................................................TTGTCAGGATACAATACA...............................................................................................................................................................................................................................................................................................................................................1820.500.50------------------------------------------------------0.50-
.....................................................................................................................................................................................................................................................................................................................................................................................................................GGGAATGAATAAGACAT........1730.330.33-------------------------------------------------------0.33
..........................................................................................................................................................................................................................................................................................................................................TGTTCCCCTCAAGCA.....................................................................................1570.290.29--0.29-----------------------------------------------------
...............................................................................................................................CAGTAAGATTTTTTTTAA.............................................................................................................................................................................................................................................................................................1870.140.14--0.14-----------------------------------------------------

Antisense strand
TAGAAATTGATCAGCAACAACTAACTCAGCAGCAACTTAATGGAAACTAGGTATGAAAGTTAATTATATGGGATCTGTTGTCAGGATACAATACACACTGATATATACATGTTGAAGTAATGGTATGCAGTAAGATTTTTTTTAATCCTATTATGTTTAGTTAAGAGCATGTTACTAAAATGCTGAGGATTTTGTAGGCTTGCATAGTAGTTGTTTTTTAACTAGCTGATTTTGTAACCATAAAAACAAGCTATCTGCTTTATCAATAAGTGTAGTTGTAATGTCAAATCAATAAGATATTCACACTCCTCAATAACATTATATTGATTGTGTTCCCCTCAAGCATCATATTTTACATTTTTTTATCATCTTTTAAACAGGTTCATGGGACAGAGTTAGAAAACTGGGAATGAATAAGACATCCATAACT
..............................................................................((.((((.(((((.....((((.(((((.(((.........))))))))))))............((((((......((((((............))))))......)))))))))))..))))))..................................................................................................................................................................................................................................
.............................................................................78.................................................................................................................................209...........................................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR343336SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR343337SRR189784SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR189785SRR189783SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR343334SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR037936(GSM510474)
293cand1. (cell line)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR189787GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191566(GSM715676)
94genomic small RNA (size selected RNA from t. (breast)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037937(GSM510475)
293cand2. (cell line)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR553576(SRX182782)
source: Testis. (testes)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR040035(GSM532920)
G001T. (cervix)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
..................................................................................................................................................................................................................................................................................................................................................................................................GGGACAGAGTTAGAAGTAA......................... 198.000.00---3.00-5.00--------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................GGGACAGAGTTAGAAGTT.......................... 184.000.00---3.00-1.00--------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................GGGACAGAGTTAGAAGT........................... 173.000.00---2.00-1.00--------------------------------------------------
..................................................................................................................................................................................CCTACAAAATCCTCAGCATT........................................................................................................................................................................................................................................ 2012.002.00---------------2.00----------------------------------------
.................................................................................................................................................................................AAATGCTGAGGATTTTGTAG......................................................................................................................................................................................................................................... 201.000.00-------------1.00------------------------------------------
.........................................................................................................................................................................................................................................................................................TGTCAAATCAATAAGCTAC.................................................................................................................................. 191.000.00-------------------------------------1.00------------------
..................................................................................................................................................................................................................................................................................................................................................................................................GGGACAGAGTTAGAAG............................ 161.000.00-----------------------1.00--------------------------------
..........................................................................................................................................................................................................................................................................................................................................TGTTCCCCTCAAGCAAAA.................................................................................. 1871.000.00-----------------------------------------1.00--------------