ID: uc004evz.2_intron_0_0_chrX_130192419_f.3p
GENE: (1)
chrX:130215298-130215547+


(2)
BRAIN
(8)
CELL-LINE
(1)
HELA
(5)
OTHER
(2)
SKIN

Sense strand
TAATTAATTAACTAATTAATTAATGGAAAATACTATCTTATTTTTGTTTCAAAGTGCTTTTGTTAAAAAATGTTTTTCTCTTTTATTTTTTCTTCTTATTTTCTCTCTTTGTACTTTTTTTTTCTAATTAGGTTTTCTTTTTCCTGGACTATCTGTTAAGGGCTGAATTTTTGAAGTTGGATTTTTTTTTTCTTTTTTAGCAAAAACAACCAGAGGCTGCTCTGCTTGAGGGTGAAGCCGCCTCCCAGTT

.....................................................................70.................................................................137...............................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189787SRR189786SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR189784SRR207111(GSM721073)
Whole cell RNA. (cell line)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189782SRR189785SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
..........................................................................TTTCTCTTTTATTTTTTCG.............................................................................................................................................................1984.000.0033.0028.00-14.001.007.00---1.00--------
............................................................................TCTCTTTTATTTTTTCG.............................................................................................................................................................179.000.003.006.00----------------
...........................................................................TTCTCTTTTATTTTTTCG.............................................................................................................................................................187.000.006.00--1.00--------------
.................................................................................................................CTTTTTTTTTCTAATTAAAG.....................................................................................................................202.000.001.00----1.00------------
................................................................................................................................................................................TTGGATTTTTTTTTTCTTTTTTTGCC................................................262.000.00--2.00---------------
............................................................................................................TTGTACTTTTTTTTTCTCTTG.........................................................................................................................212.000.00--2.00---------------
....................................................................................................................................................................................ATTTTTTTTTTCTTTTTTAGTGAC..............................................242.000.00--2.00---------------
..........................................................................TTTCTCTTTTATTTTTTCGC............................................................................................................................................................202.000.00----2.00-------------
..........................................................................TTTCTCTTTTATTTTTTTCGC...........................................................................................................................................................212.000.00----2.00-------------
...................................................................................................................................................................................................................AGAGGCTGCTCTGCTTAGAA...................201.000.00------------1.00-----
.................................................................................................................................................................................TGGATTTTTTTTTTCTTTTTTGCCT................................................251.000.00--1.00---------------
.......................................................................................TTTTCTTCTTATTTTCTGCGG..............................................................................................................................................211.000.00--1.00---------------
..........................................................................................................CTTTGTACTTTTTTTTTGTTG...........................................................................................................................211.000.00--------------1.00---
..............................................................................................................................................................................AGTTGGATTTTTTTTTTCTTTTTCAGC.................................................271.000.00--1.00---------------
............................................................................................................TTGTACTTTTTTTTTCGTTC..........................................................................................................................201.000.00-------1.00----------
.....................................................................................................................................................................................TTTTTTTTTTCTTTTTTAGCACGG.............................................241.000.00----1.00-------------
................................................................................................................................................................................TTGGATTTTTTTTTTCTTTTTTTTC.................................................251.000.00----1.00-------------
..............................................................................................................................................................................AGTTGGATTTTTTTTTTCTTTTGAGT..................................................261.000.00--1.00---------------
....................................................................................................................................................................................ATTTTTTTTTTCTTTTTTATGCG...............................................231.000.00--1.00---------------
................................................................................................................ACTTTTTTTTTCTAACCG........................................................................................................................181.000.00---1.00--------------
.................................................................................................................................................................................TGGATTTTTTTTTTCTTTTTTGG..................................................231.000.00--1.00---------------
..........................................................................................................CTTTGTACTTTTTTTTTCGTTC..........................................................................................................................221.000.00-------1.00----------
.....................................................................................................................................................................................TTTTTTTTTTCTTTTTTAGCAGTTT............................................251.000.00--1.00---------------
..........................................................................................................CTTTGTACTTTTTTTTTGTTC...........................................................................................................................211.000.00----------1.00-------
................................................................................................................................................................................TTGGATTTTTTTTTTCTTTTTCTGG.................................................251.000.00----1.00-------------
..........................................................................TTTCTCTTTTATTTTTTCGCAT..........................................................................................................................................................221.000.00--1.00---------------
.................................................................................................................................................................................TGGATTTTTTTTTTCTTTTTTACAGC...............................................261.000.00--1.00---------------
.....................................................................ATGTTTTTCTCTTTTATTTGACT..............................................................................................................................................................231.000.00--1.00---------------
...........................................................................................................TTTGTACTTTTTTTTTCGTTC..........................................................................................................................211.000.00--------1.00---------
........................................................................TTTTTCTCTTTTATTTTTAAG.............................................................................................................................................................211.000.00---1.00--------------
.......................................................................................................................................................................................TTTTTTTTCTTTTTTAGCTTAC.............................................221.000.00---------1.00--------
..........................................................................................................................................................................................TTTTTCTTTTTTAGCGCAT.............................................191.000.00----1.00-------------
..............................................................................TCTTTTATTTTTTCTTCAG.........................................................................................................................................................191.000.00-1.00----------------
..........................................................................TTTCTCTTTTATTTTTTTTCG...........................................................................................................................................................211.000.001.00-----------------
.................................................................................................................................................................................TGGATTTTTTTTTTCTTTTTCGTG.................................................241.000.00--1.00---------------
..........................................................................TTTCTCTTTTATTTTTTCAG............................................................................................................................................................201.000.00-----------1.00------
...........................................................................................................TTTGTACTTTTTTTTTCTAACTG........................................................................................................................231.000.00---------------1.00--
............................................................................TCTCTTTTATTTTTTCTAAAG.........................................................................................................................................................211.000.00---1.00--------------
....................................................................................ATTTTTTCTTCTTATTTTTTTC................................................................................................................................................221.000.00----1.00-------------
................................................................................................................ACTTTTTTTTTCTAATTCCAG.....................................................................................................................211.000.00---1.00--------------
..........................................................................................................................................................................................TTTTTCTTTTTTAGCGTAG.............................................191.000.00--1.00---------------
..................................................................................................................................................................................................TTTTAGCAAAAACAACC.......................................1711.001.00----1.00-------------
...............................................................................CTTTTATTTTTTCTTCATTG.......................................................................................................................................................201.000.00---1.00--------------
.................................................................................................................................................................................TGGATTTTTTTTTTCTTTTTTGTC.................................................241.000.00--1.00---------------
.............................................................................CTCTTTTATTTTTTCG.............................................................................................................................................................161.000.001.00-----------------
....................................................................................................................................................................................ATTTTTTTTTTCTTTTTTAGCAGGG.............................................251.000.00----1.00-------------
......................................................................................TTTTTCTTCTTATTTTCAGGA...............................................................................................................................................211.000.00--1.00---------------
..........................................................................................................CTTTGTACTTTTTTTCACA.............................................................................................................................191.000.00----------------1.00-
............................................................................TCTCTTTTATTTTTTCTTCTT.........................................................................................................................................................2120.500.50-----------------0.50

Antisense strand
TAATTAATTAACTAATTAATTAATGGAAAATACTATCTTATTTTTGTTTCAAAGTGCTTTTGTTAAAAAATGTTTTTCTCTTTTATTTTTTCTTCTTATTTTCTCTCTTTGTACTTTTTTTTTCTAATTAGGTTTTCTTTTTCCTGGACTATCTGTTAAGGGCTGAATTTTTGAAGTTGGATTTTTTTTTTCTTTTTTAGCAAAAACAACCAGAGGCTGCTCTGCTTGAGGGTGAAGCCGCCTCCCAGTT

.....................................................................70.................................................................137...............................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189787SRR189786SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR189784SRR207111(GSM721073)
Whole cell RNA. (cell line)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189782SRR189785SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
......................................................................................................................................................................................................AGCAAAAACAACCAGAT................................... 172.000.00--1.00-1.00-------------
...............................................................................................................................................CTGGACTATCTGTTAATT......................................................................................... 181.000.00--------1.00---------
......................................................................................TTTTTCTTCTTATTTTCTCAA............................................................................................................................................... 211.000.00-------------1.00----
..............................................TTTCAAAGTGCTTTTAAGG......................................................................................................................................................................................... 191.000.00------1.00-----------
.............................................GTTTCAAAGTGCTTTTG............................................................................................................................................................................................ 171.000.00------1.00-----------