ID: uc004eua.2_intron_4_0_chrX_123164976_f.3p
GENE: (5)
chrX:123171177-123171426+


(5)
B-CELL 		(6)
BRAIN 		(7)
BREAST 		(8)
CELL-LINE 		(4)
HEART 		(1)
KIDNEY 		(11)
LIVER 		(2)
OTHER 		(6)
SKIN 		(3)
UTERUS 		(2)
XRN.ip

Sense strand
TGTGTTATCAGATAATTGTTTTACTGAATTCGATTCTATTTTATTATTGTTAAAATTGAACTTTAAATTTCAGTGTATAAGTATTTATATTAAAGTAATGTGATACTATATAATCTTGAATTTTATGACTTTATCAGACTTAATTGATTTTGAGAAAATTAGAAGAAGCTAATGATTTTATTTTTTTCCCTCTGCTGTAGTCGGTGGTAGATGATTGGATAGAATCATACAAGCATGACCGAGATATAGC
.....................................................................................(((((((...)))))))...(((((.......(((....((((..((((.((.(((..(((((((.....)))))))...))))).))))..))))....))).......)))))..................................................
.....................................................................................86................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR343334SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR189782SRR189785GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR191398(GSM715508)
35genomic small RNA (size selected RNA from t. (breast)		SRR189784TAX577580(Rovira)
total RNA. (breast)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		TAX577746(Rovira)
total RNA. (breast)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR191459(GSM715569)
32genomic small RNA (size selected RNA from t. (breast)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		TAX577741(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577579(Rovira)
total RNA. (breast)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577453(Rovira)
total RNA. (breast)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
..........................................................................................TAAAGTAATGTGATAACT..............................................................................................................................................1830.000.006.003.004.001.00-4.002.00---1.00----2.002.00-----1.00-1.00-1.00--1.00------------------1.00--------
..........................................................................................TAAAGTAATGTGATAAGT..............................................................................................................................................1820.000.0012.003.00-2.00--2.00---1.00----------------------------------------------
..........................................................................................TAAAGTAATGTGATAAAT..............................................................................................................................................1810.000.003.001.001.002.00-1.00-----------2.00---------------------------------------
..........................................................................................TAAAGTAATGTGATAACTG.............................................................................................................................................199.000.001.00-------1.00--2.00-1.00------------1.00--------1.00--1.00------------1.00-----
..........................................................................................TAAAGTAATGTGATAATT..............................................................................................................................................187.000.001.002.001.001.00------1.00-------------1.00--------------------------------
..........................................................................................TAAAGTAATGTGATAAATG.............................................................................................................................................194.000.00--------2.00--1.00--------------------------------------1.00------
..........................................................................................TAAAGTAATGTGATACCTGA............................................................................................................................................204.000.00--------1.00----1.00--------------------------1.00-1.00--------------
..........................................................................................TAAAGTAATGTGATAAGTG.............................................................................................................................................194.000.002.00-1.001.00-----------------------------------------------------
............................................................................................................................................................................................................TGGTAGATGATTGGATAG............................1813.003.00-------3.00-------------------------------------------------
.........................................................................................TTAAAGTAATGTGATAAAT..............................................................................................................................................192.000.002.00--------------------------------------------------------
.....................................................................................................................................................................................................................ATTGGATAGAATCATACAAGCATGACC..........2712.002.00---------------------------------1.00---1.00-------------------
.....................................................................................................................................................................................................................ATTGGATAGAATCATACAAGCATGACCG.........2812.002.00-----------------------2.00---------------------------------
.................................................................................................................................................................................................................GATGATTGGATAGAATCATA.....................2012.002.00----2.00----------------------------------------------------
....................................................................................................................................................................................................................GATTGGATAGAATCATACAAGC................2212.002.00--------------------2.00------------------------------------
..............................................................................................................................................................................ATTTTATTTTTTTCCCTCTGA.......................................................212.000.00---------2.00-----------------------------------------------
............................................................................................................................................................................................................TGGTAGATGATTGGATAGAA..........................2011.001.00----1.00----------------------------------------------------
.........................................................................................TTAAAGTAATGTGATATCT..............................................................................................................................................191.000.00---------------------------------------1.00-----------------
.......................................................................................................................................................................................................................TGGATAGAATCATACAAGC................1911.001.00----------------------------------------------1.00----------
.....................................................................................................................................................................................................TAGTCGGTGGTAGATGATTGGATAGAATCATA.....................3211.001.00----------------------------------1.00----------------------
.......................................................................................................................................................................................................................TGGATAGAATCATACAAGCA...............2011.001.00------------------------------------1.00--------------------
......................................................................................................................................................................................................................TTGGATAGAATCATACAAGCATGACCG.........2711.001.00---------------------1.00-----------------------------------
................................................................................................................................................................................................TGCTGTAGTCGGTGGTG.........................................171.000.00-----------------------------------------------1.00---------
.....................................................................................................................................................................................................................ATTGGATAGAATCATACAAG.................2011.001.00---------1.00-----------------------------------------------
........................................................................................................................................................................................................TCGGTGGTAGATGATTGGATAGAATCATAC....................3011.001.00----------------------------------------------------1.00----
........................................................................................................................................................................................................TCGGTGGTAGATGATTGGATAG............................2211.001.00---------------------------------------------1.00-----------
..........................................................................................................................................................................................................GGTGGTAGATGATTGGATAGA...........................2111.001.00----1.00----------------------------------------------------
.......................................................................................................................................................................................................................TGGATAGAATCATACAAGCATGACCGA........2711.001.00---------------------1.00-----------------------------------
........................................................................................................................................................................................................................GGATAGAATCATACAAGCATGACCGA........2611.001.00-------------------------1.00-------------------------------
...........................................................................................................................................................................................................GTGGTAGATGATTGGATA.............................1811.001.00----1.00----------------------------------------------------
.....................................................................................................................................................................................................................ATTGGATAGAATCATACAAGC................2111.001.00-------------------------1.00-------------------------------
................................................................................................................................................................................................TGCTGTAGTCGGTGGTGTTG......................................201.000.00-------------------------------------------------1.00-------
...........................................................................................................................................................................................................GTGGTAGATGATTGGATAGAAT.........................2211.001.00-------------------1.00-------------------------------------
............................................................................................................................................................................................................TGGTAGATGATTGGATAGA...........................1911.001.00----1.00----------------------------------------------------
.......................................................................................................................................................................................................................TGGATAGAATCATACAAGCATGACCGAGATA....3111.001.00--------------------------------------------1.00------------
.........................................................................................TTAAAGTAATGTGATAAT...............................................................................................................................................181.000.00------------------------------1.00--------------------------
......................................................................................................................................................................................................................TTGGATAGAATCATACAAGCATGACC..........2611.001.00--1.00------------------------------------------------------
.......................................................................................................................................................................................................................TGGATAGAATCATACAAGCATGACCG.........2611.001.00--------------1.00------------------------------------------
..........................................................................................TAAAGTAATGTGATAATTG.............................................................................................................................................191.000.00----------------------1.00----------------------------------
..........................................................................................TAAAGTAATGTGATAAATA.............................................................................................................................................191.000.00-------------1.00-------------------------------------------
...........................................................................................................................................................................................................GTGGTAGATGATTGGATAAAAT.........................2211.001.00---------------------------1.00-----------------------------
.......................................................................................................................................................................................................................TGGATAGAATCATACAAGCATGA............2311.001.00--------------1.00------------------------------------------
............................................................................................................................................................................................................TGGTAGATGATTGGATAGAATCA.......................2311.001.00-------------------------------1.00-------------------------
...................................................................................................................................................................................................................TGATTGGATAGAATCATACAAGCATGACCGA........3111.001.00------------------1.00--------------------------------------
..........................................................................................TAAAGTAATGTGATATCGC.............................................................................................................................................191.000.00--------------------------------1.00------------------------
.................................................................................................................................................................................TTATTTTTTTCCCTCTGCTGTAG..................................................2311.001.00-----------------------------------------1.00---------------
.........................................................................................TTAAAGTAATGTGATAAGT..............................................................................................................................................191.000.00--1.00------------------------------------------------------
........................................................................................................................TTTTATGACTTTATCGGCA...............................................................................................................191.000.00------------1.00--------------------------------------------
..................................................................................................................................TTATCAGACTTAATTTTAC.....................................................................................................191.000.00----------------------------1.00----------------------------
.....................................................................................................................................................................................................................ATTGGATAGAATCATACAAGCATGACCGAGA......3111.001.00------------------1.00--------------------------------------
..............................................................................................................................................................................................................GTAGATGATTGGATAGAATG........................201.000.00-------------------------------------------1.00-------------
................................................................................................................................................................................................................AGATGATTGGATAGAATCAT......................2011.001.00-------------------1.00-------------------------------------
.......................................................................................................................................................................................................................TGGATAGAATCATACAAGCATG.............2211.001.00-------1.00-------------------------------------------------
.........................................................................................................................................................................TAATGATTTTATTTTTTTCCCTCTGCTGTAG..................................................3111.001.00-----------------------------------------------------1.00---
.......................................................................................................................................................................................TTTTCCCTCTGCTGTAG..................................................1720.500.50-------------------------------------------------------0.50-
...............................................................................................................................................................................................CTGCTGTAGTCGGTG............................................1530.330.33--------------------------------------------------------0.33
..........................................................................................................................................................................................................GGTGGTAGATGATTGGA...............................1730.330.33--------------0.33------------------------------------------

Antisense strand
TGTGTTATCAGATAATTGTTTTACTGAATTCGATTCTATTTTATTATTGTTAAAATTGAACTTTAAATTTCAGTGTATAAGTATTTATATTAAAGTAATGTGATACTATATAATCTTGAATTTTATGACTTTATCAGACTTAATTGATTTTGAGAAAATTAGAAGAAGCTAATGATTTTATTTTTTTCCCTCTGCTGTAGTCGGTGGTAGATGATTGGATAGAATCATACAAGCATGACCGAGATATAGC
.....................................................................................(((((((...)))))))...(((((.......(((....((((..((((.((.(((..(((((((.....)))))))...))))).))))..))))....))).......)))))..................................................
.....................................................................................86................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR343334SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR189782SRR189785GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR191398(GSM715508)
35genomic small RNA (size selected RNA from t. (breast)		SRR189784TAX577580(Rovira)
total RNA. (breast)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		TAX577746(Rovira)
total RNA. (breast)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR191459(GSM715569)
32genomic small RNA (size selected RNA from t. (breast)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		TAX577741(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577579(Rovira)
total RNA. (breast)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577453(Rovira)
total RNA. (breast)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
........................................................................................................................................................AGAAAATTAGAAGAAGTCAT.............................................................................. 201.000.00------------1.00--------------------------------------------
.........................................................................TGTATAAGTATTTATTTTC.............................................................................................................................................................. 191.000.00------------1.00--------------------------------------------
....................................................................................................................................................................GAAGCTAATGATTTTATAA................................................................... 191.000.00------------------------------------------------------1.00--