| (8) CELL-LINE | (1) HEART | (1) LIVER | (3) OTHER | (4) SKIN | (1) XRN.ip |
| AATATAAGCATTCGTTGTTACATAAATTATACTTCGCAGCTTTAGAATCTTAGGAAAATACTAAACATTGATTTCTCTTAAGATTTTTAAATATAGAAAGTTGGATTCTGTTTCTGTGTTAAATATGTAAATTATTTGTGGCAGTTAGTGAGAAACCTTGGATTATAGCATGCTTTCCTCTTTTTTTTTTTTTTAAATAGGCCTTCACTATTCTGTGTGATATTTTGATGATCTTCAGCCATCAGATTAT ...........................................................................................................................................((((((((.((((....)))).....)))).))))............................................................................ .................................................................................................................................130...................................................................200................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR330880(SRX091718) tissue: skin psoriatic involveddisease state:. (skin) | SRR189784 | SRR342899(SRX096795) small RNA seq of Left atrial tissue. (heart) | SRR330873(SRX091711) tissue: skin psoriatic involveddisease state:. (skin) | SRR330892(SRX091730) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR189782 | SRR189785 | SRR039635(GSM518472) THP1_nuc_sRNAs. (cell line) | SRR330869(SRX091707) tissue: skin psoriatic involveddisease state:. (skin) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...............................................................................................................................................................................TCCTCTTTTTTTTTTTTTTAAAAG................................................... | 24 | 21.00 | 0.00 | 11.00 | 10.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................CCTCTTTTTTTTTTTTTTAAATTTTG................................................ | 26 | 8.00 | 0.00 | 2.00 | 5.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................CCTCTTTTTTTTTTTTTTAAAAG................................................... | 23 | 6.00 | 0.00 | 4.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................TTCCTCTTTTTTTTTTTTTTAAAT.................................................... | 24 | 2 | 5.00 | 5.00 | 3.50 | 1.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................TCCTCTTTTTTTTTTTCAAG....................................................... | 20 | 5.00 | 0.00 | 1.00 | 1.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................TCCTCTTTTTTTTTTTTTTACAG.................................................... | 23 | 4.00 | 0.00 | - | - | 2.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................................................CTATTCTGTGTGATATTTTGATG.................... | 23 | 1 | 3.00 | 3.00 | - | - | - | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................CTCTTTTTTTTTTTTTTAAAAAAG................................................. | 24 | 3.00 | 0.00 | 1.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................TCCTCTTTTTTTTTTTTTTAAAT.................................................... | 23 | 6 | 2.83 | 2.83 | 1.33 | 1.33 | 0.17 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................CCTCTTTTTTTTTTTTTTAAAAAG.................................................. | 24 | 2.00 | 0.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................................................................TTTGATGATCTTCAGTAG......... | 18 | 2.00 | 0.00 | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................TCCTCTTTTTTTTTTTCCAG....................................................... | 20 | 2.00 | 0.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................TTCCTCTTTTTTTTTTTTTTAAAAG................................................... | 25 | 5 | 2.00 | 0.20 | 1.60 | 0.40 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................CTCTTTTTTTTTTTTTTAAATAG.................................................. | 23 | 6 | 1.67 | 1.67 | 0.17 | 0.33 | 0.67 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................TTTCCTCTTTTTTTTTTTATG........................................................ | 21 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................CCTCTTTTTTTTTTTTTTACCG.................................................... | 22 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................................................................CTCTTTTTTTTTTTTTTAAACCG.................................................. | 23 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................CCTCTTTTTTTTTTTTTTATTGT................................................... | 23 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................CCTCTTTTTTTTTTTTTTAAAAGG.................................................. | 24 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................TTCCTCTTTTTTTTTTTCCCG....................................................... | 21 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................................................................................................TTTCCTCTTTTTTTTTGACG......................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................TCCTCTTTTTTTTTTTTTTAGAG.................................................... | 23 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................................................................CTCTTTTTTTTTTTTTTAAAAAC.................................................. | 23 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................................TTTGTGGCAGTTAGTGAGA................................................................................................. | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................TTTCCTCTTTTTTTTTTTCCTG....................................................... | 22 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................................................................................CTTTCCTCTTTTTTTTTTTCAG........................................................ | 22 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................TCCTCTTTTTTTTTTTTTTATTG.................................................... | 23 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................................................................................................ATTCTGTGTGATATTTTGATGATC................. | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .............................................................................................................................................................................TTTCCTCTTTTTTTTTTTATTG....................................................... | 22 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................TCCTCTTTTTTTTTTTTTTACAAG................................................... | 24 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................................................................CTCTTTTTTTTTTTTTTAAATCCGG................................................ | 25 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................................................................................CTTTCCTCTTTTTTTTTTTCCCG....................................................... | 23 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................................................................................................TTTCCTCTTTTTTTTTTTTTTAG...................................................... | 23 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................AGTTGGATTCTGTTTCTGTGTTAA................................................................................................................................ | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ............................................................................................................................................................................CTTTCCTCTTTTTTTTTTTTTTAATTCT.................................................. | 28 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................CCTCTTTTTTTTTTTTTTAAATTTTT................................................ | 26 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................CCTCTTTTTTTTTTTTTTAAAAATG................................................. | 25 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................................................................................CTTTCCTCTTTTTTTTTTTTTTAAATAG.................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ...............................................................................................................................................................................TCCTCTTTTTTTTTTTCACG....................................................... | 20 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................................................TCTTTTTTTTTTTTTTAAATATTTG............................................... | 25 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................CCTCTTTTTTTTTTTTTTAAATTAAG................................................ | 26 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................TCCTCTTTTTTTTTTTTTTAAAGG................................................... | 24 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................................................................................................ATTCTGTGTGATATTTTGA...................... | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ..............................................................................................................................................................................................................................TTTTGATGATCTTCAGCCATCA...... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .................................................................................................................................................................................CTCTTTTTTTTTTTTTTAAATTAG................................................. | 24 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................TCCTCTTTTTTTTTTTTTTACC..................................................... | 22 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................TCCTCTTTTTTTTTTTTTTAACTA................................................... | 24 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................................................................................CTTTCCTCTTTTTTTTTTTATG........................................................ | 22 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................TTCCTCTTTTTTTTTTTTTTAAATG................................................... | 25 | 2 | 1.00 | 5.00 | 0.50 | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................CCTCTTTTTTTTTTTTTTACGG.................................................... | 22 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................CCTCTTTTTTTTTTTTTTAAATTTAG................................................ | 26 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................................................................................CTTTCCTCTTTTTTTTTTTCCAG....................................................... | 23 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................................................................CTCTTTTTTTTTTTTTTAAATATTG................................................ | 25 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................TGCTTTCCTCTTTTTTTTTTCCTG........................................................ | 24 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................TCCTCTTTTTTTTTTTCAA........................................................ | 19 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................TTCCTCTTTTTTTTTTTTTGCCC..................................................... | 23 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................................................................................................TTTCCTCTTTTTTTTTTCCGG........................................................ | 21 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................TCCTCTTTTTTTTTTTTTGGTC..................................................... | 22 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................................................................................CTTTCCTCTTTTTTTTTTTTTCTG...................................................... | 24 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................................................................................................TTTCCTCTTTTTTTTTTTCG......................................................... | 20 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................TTCCTCTTTTTTTTTTTTTGCTT..................................................... | 23 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................................................................CTCTTTTTTTTTTTTTTAAACCAG................................................. | 24 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................................................................CTCTTTTTTTTTTTTTTAAAACG.................................................. | 23 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................TCCTCTTTTTTTTTTTTTTACAA.................................................... | 23 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................................................................CTCTTTTTTTTTTTTTTAAAAACG................................................. | 24 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................................................................CTCTTTTTTTTTTTTTTAAAACTT................................................. | 24 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................CCTCTTTTTTTTTTTTTTAAATA................................................... | 23 | 5 | 0.20 | 0.20 | - | 0.20 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................TTCCTCTTTTTTTTTTTTTTAAA..................................................... | 23 | 5 | 0.20 | 0.20 | 0.20 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................TCCTCTTTTTTTTTTTTTTAAATTCTT................................................ | 27 | 6 | 0.17 | 2.83 | 0.17 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................TGCTTTCCTCTTTTTTTTTTTT.......................................................... | 22 | 7 | 0.14 | 0.14 | - | - | - | - | 0.14 | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................TTTCCTCTTTTTTTTTTTTTTAATTCT.................................................. | 27 | 9 | 0.11 | 0.11 | - | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................TTTCCTCTTTTTTTTTTTTTTAA...................................................... | 23 | 9 | 0.11 | 0.11 | - | - | - | - | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - |
| AATATAAGCATTCGTTGTTACATAAATTATACTTCGCAGCTTTAGAATCTTAGGAAAATACTAAACATTGATTTCTCTTAAGATTTTTAAATATAGAAAGTTGGATTCTGTTTCTGTGTTAAATATGTAAATTATTTGTGGCAGTTAGTGAGAAACCTTGGATTATAGCATGCTTTCCTCTTTTTTTTTTTTTTAAATAGGCCTTCACTATTCTGTGTGATATTTTGATGATCTTCAGCCATCAGATTAT ...........................................................................................................................................((((((((.((((....)))).....)))).))))............................................................................ .................................................................................................................................130...................................................................200................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR330880(SRX091718) tissue: skin psoriatic involveddisease state:. (skin) | SRR189784 | SRR342899(SRX096795) small RNA seq of Left atrial tissue. (heart) | SRR330873(SRX091711) tissue: skin psoriatic involveddisease state:. (skin) | SRR330892(SRX091730) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR189782 | SRR189785 | SRR039635(GSM518472) THP1_nuc_sRNAs. (cell line) | SRR330869(SRX091707) tissue: skin psoriatic involveddisease state:. (skin) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .....................................................................................TTTAAATATAGAAAGTTG................................................................................................................................................... | 18 | 2.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | 1.00 | - | - | - | - | |
| .......GCATTCGTTGTTACAACG................................................................................................................................................................................................................................. | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | |
| .........................................................................................................................................................................................................................................TTCAGCCATCAGATTAAA | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | |
| .........................................................................................................................................................................................................................................TTCAGCCATCAGATTAAGT | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |