ID: uc004esc.3_intron_1_0_chrX_119007357_f.5p
GENE: (2)
chrX:119007307-119007556+


(8)
B-CELL
(2)
BRAIN
(1)
BREAST
(14)
CELL-LINE
(2)
CERVIX
(4)
HEART
(2)
HELA
(1)
KIDNEY
(5)
LIVER
(1)
OTHER
(7)
SKIN
(1)
UTERUS

Sense strand
TGGAAAGAGATAGGCGCATCTCTGGAGTTGATCGTTACTATGTGTCAAAGGTAAGATGCCACTCTGATGCCAGCCTTTTGCCAGGGTTGAGGTGGGTTCTGGTAATGCCTTGCCAAGGGTCATACAGTGCTAATATATAACTAGCATTTTCTTATCTACTAGTGAGGTTGGCATCTTTTTACATATTTAATCTTTTATATTTCTTTTTTTTTTTTAGTTTTTCTTCTGTCATATATTTCTTATTCTGTGG
..................................................((((((.........((((((((((((..((.((((.(((((..((..(((((((....))))).))..))....(((((((.........))))))).))))).)).)).)))))))))))))).))))))....................................................................
..................................................51...................................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR189782SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553575(SRX182781)
source: Kidney. (Kidney)
GSM339995(GSM339995)
hues6NP. (cell line)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040009(GSM532894)
G727T. (cervix)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR189785SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR040039(GSM532924)
G531T. (cervix)
SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR343335SRR189786SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR029131(GSM416760)
MCF7. (cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
...........................................................................................................................................................................CATCTTTTTACATATTTAATC..........................................................21126.0026.0017.00--9.00------------------------------------------------
...........................................................................................................................................................................CATCTTTTTACATATTTAATCTT........................................................23120.0020.0017.00--3.00------------------------------------------------
...........................................................................................................................................................................CATCTTTTTACATATTTAA............................................................19114.0014.003.006.002.003.00------------------------------------------------
.....................................................................................................................................................................................................TATTTCTTTTTTTTTTTTACTTG..............................236.000.003.001.002.00-------------------------------------------------
..............................................................................................................................................................................................TCTTTTATATTTCTTTTTTTTTTTTG..................................265.000.001.002.002.00-------------------------------------------------
...............................................................................................................................................................................................CTTTTATATTTCTTTTTTTTTTTTG..................................254.000.001.001.001.001.00------------------------------------------------
...............................................................................................................................................................................................CTTTTATATTTCTTTTTTTTTTTAG..................................254.000.001.001.00-2.00------------------------------------------------
.......AGATAGGCGCATCTCTGGAGTTGAT..........................................................................................................................................................................................................................2513.003.00-----------2.00---------------------------1.00------------
...................................................................................................................................................................................................TATATTTCTTTTTTTTTTTTAATTG..............................253.000.001.001.001.00-------------------------------------------------
.......AGATAGGCGCATCTCTGG.................................................................................................................................................................................................................................1813.003.00------1.00----------------------------1.001.00---------------
....................................................................................................................................................................................................ATATTTCTTTTTTTTTTTTAAATG..............................243.000.00-1.00-1.00----1.00-------------------------------------------
.......AGATAGGCGCATCTCTGGAG...............................................................................................................................................................................................................................2013.003.00----------2.00-----------------------1.00-----------------
................................................................................................................................................................................................TTTTATATTTCTTTTTTTTTTTCTTA................................263.000.00--2.001.00------------------------------------------------
.................ATCTCTGGAGTTGATCGTTA.....................................................................................................................................................................................................................2013.003.00------1.002.00--------------------------------------------
..............................................................................................................................................................................................TCTTTTATATTTCTTTTTTTTTTTTTTTT...............................293.000.00-1.001.001.00------------------------------------------------
.........................AGTTGATCGTTACTATGT...............................................................................................................................................................................................................1812.002.00------------------------------1.00-------------1.00-------
...............................................................................................................................................................................................CTTTTATATTTCTTTTTTTTTTAG...................................242.000.001.001.00--------------------------------------------------
........GATAGGCGCATCTCTTTT................................................................................................................................................................................................................................182.000.00----------2.00-----------------------------------------
....................................ACTATGTGTCAAAGGGTTT...................................................................................................................................................................................................192.000.00------------2.00---------------------------------------
................................................................................................................................................................AGTGAGGTTGGCATCTTTTTAC....................................................................2212.002.00-----2.00----------------------------------------------
...........................................................................................................................................................................CATCTTTTTACATATTTAATCTC........................................................2312.002.00---2.00------------------------------------------------
...........................................................................................................................................................................CATCTTTTTACATATTTAACC..........................................................2112.0014.002.00---------------------------------------------------
..............................................................................................................................................................................CTTTTTACATATTTAATCTT........................................................2012.002.002.00---------------------------------------------------
................................................................................................................................................................................................TTTTATATTTCTTTTTTTTTTCTTA.................................252.000.00-2.00--------------------------------------------------
.................................................................................................................................................................................................TTTATATTTCTTTTTTTTTTTTTTTC...............................262.000.00-1.001.00-------------------------------------------------
...............................................................................................................................................................................................CTTTTATATTTCTTTTTTTTTTTG...................................242.000.00-1.001.00-------------------------------------------------
..............................................................................................................................................................................................TCTTTTATATTTCTTTTTTTTTG.....................................232.000.00-2.00--------------------------------------------------
.......................GGAGTTGATCGTTAC....................................................................................................................................................................................................................1512.002.00------------------1.00----------1.00----------------------
...........................................................................................................................................................................CATCTTTTTACATATTTAATCT.........................................................2212.002.00---2.00------------------------------------------------
....................................................................................................................................................................................................ATATTTCTTTTTTTTTTTAAG.................................212.000.00---1.00-1.00----------------------------------------------
......................................................................................................................................................................................................ATTTCTTTTTTTTTTTTACTTG..............................222.000.001.001.00--------------------------------------------------
..............................................................................................................................................................................................TCTTTTATATTTCTTTTTTTTTTTTTTTG...............................292.000.00-2.00--------------------------------------------------
...............................................................................................................................................................................................CTTTTATATTTCTTTTTTTTTTTTTTG................................272.000.00-1.001.00-------------------------------------------------
.......AGATAGGCGCATCTCTGGAGTTGATCG........................................................................................................................................................................................................................2712.002.00-------------2.00--------------------------------------
.........ATAGGCGCATCTCTGGAG...............................................................................................................................................................................................................................1812.002.00-------1.00------------1.00-------------------------------
..................................................................................................................................................................................................TTATATTTCTTTTTTTTTTTTAATTG..............................262.000.00-2.00--------------------------------------------------
....................................................................................................................................................................................................ATATTTCTTTTTTTTTTTTAATTA..............................242.000.00--2.00-------------------------------------------------
.......AGATAGGCGCATCTCTGGA................................................................................................................................................................................................................................1912.002.00----------------------1.00--------------------1.00--------
.......................GGAGTTGATCGTTACTATGT...............................................................................................................................................................................................................2012.002.00------2.00---------------------------------------------
.........................................................................................................................................................................................................TCTTTTTTTTTTTTAGTTTTAGGG.........................242.000.00----2.00-----------------------------------------------
.......AGATAGGCGCATCTCTGGAGTT.............................................................................................................................................................................................................................2212.002.00---------1.00--------------1.00---------------------------
.................ATCTCTGGAGTTGATCGTTACTAT.................................................................................................................................................................................................................2412.002.00------1.00--------------------------1.00------------------
..............................................................................................................................................................................................TCTTTTATATTTCTTTTTTTTTTTTTTG................................282.000.00--1.001.00------------------------------------------------
.....................................................................................................................................................................................................TATTTCTTTTTTTTTTTTAATTG..............................232.000.00--1.00-----1.00-------------------------------------------
...................................................................................................................................................................................................TATATTTCTTTTTTTTTTTAAG.................................222.000.00--2.00-------------------------------------------------
................................................................................................................................................................................................TTTTATATTTCTTTTTTTTTTTTACATG..............................282.000.00-1.001.00-------------------------------------------------
......................TGGAGTTGATCGTTAC....................................................................................................................................................................................................................1612.002.00-----------------------1.00-----------------------1.00----
......................................................................................................................................................................................................ATTTCTTTTTTTTTTTTAGTAGAG............................241.000.00----1.00-----------------------------------------------
...............GCATCTCTGGAGTTGATCGT.......................................................................................................................................................................................................................2011.001.00-------------------------------------------------1.00--
...........................................................................................................................................................................CATCTTTTTACATATTTAATCTTTTAG....................................................271.000.001.00---------------------------------------------------
..................................TTACTATGTGTCAAAGGGTT....................................................................................................................................................................................................201.000.00------------1.00---------------------------------------
...............GCATCTCTGGAGTTGAT..........................................................................................................................................................................................................................1711.001.00---------------------------1.00------------------------
.......AGATAGGCGCATCTCTGGAGTTG............................................................................................................................................................................................................................2311.001.00-----------1.00----------------------------------------
.......................................................ATGCCACTCTGATGCCAGCCTGC............................................................................................................................................................................231.000.00----1.00-----------------------------------------------
.....................................................................................................................................................................................................TATTTCTTTTTTTTTTTTATACA..............................231.000.00--------1.00-------------------------------------------
.......................................................................................................................................................................................................TTTCTTTTTTTTTTTTAGTAGGG............................231.000.00----1.00-----------------------------------------------
........GATAGGCGCATCTCTGGAGTTGA...........................................................................................................................................................................................................................2311.001.00-----------1.00----------------------------------------
...........................................................................................................................................................................CATCTTTTTACATATTTAATCTTTTATACTTC...............................................321.000.00---1.00------------------------------------------------
...........................................................................................................................................................................CATCTTTTTACATATTTAATCTTTTTTAG..................................................291.000.001.00---------------------------------------------------
.....................................................................................................................................................................................................TATTTCTTTTTTTTTTTTAACTG..............................231.000.00--1.00-------------------------------------------------
.......AGATAGGCGCATCTCTGA.................................................................................................................................................................................................................................181.000.00-------1.00--------------------------------------------
......................................................................................................................................................................................................ATTTCTTTTTTTTTTTTATCTA..............................221.000.00--1.00-------------------------------------------------
....................................................................................................................................................................................................ATATTTCTTTTTTTTTTTTCTCC...............................231.000.00----1.00-----------------------------------------------
..................TCTCTGGAGTTGATCGT.......................................................................................................................................................................................................................1711.001.00------------------------------------------------1.00---
......................................................................................................................................................................................................ATTTCTTTTTTTTTTTTAGATC..............................221.000.00----1.00-----------------------------------------------
................................................................................................................................................................................................TTTTATATTTCTTTTTTTTTTTTAG.................................2511.001.001.00---------------------------------------------------
.....................................................................................................................................................................................................TATTTCTTTTTTTTTTTTAGTAGA.............................241.000.00----1.00-----------------------------------------------
...................................................................................................................................................................................................TATATTTCTTTTTTTTTTTTCACG...............................241.000.00--1.00-------------------------------------------------
.....................................................................................................................................................................................................TATTTCTTTTTTTTTTTTATTAG..............................231.000.00-1.00--------------------------------------------------
............GGCGCATCTCTGGAGTTGATCGTTACT...................................................................................................................................................................................................................2711.001.00-----------1.00----------------------------------------
....................................................................................................................................................................................................ATATTTCTTTTTTTTTTTTAATTG..............................241.000.00---1.00------------------------------------------------
...........................................................................................................................................................................CATCTTTTTACATATTTAACCTT........................................................2311.0014.001.00---------------------------------------------------
..................................................................................................................................................................................................TTATATTTCTTTTTTTTTTAG...................................211.000.00--1.00-------------------------------------------------
...........AGGCGCATCTCTGGAGTT.............................................................................................................................................................................................................................1811.001.00-----------------1.00----------------------------------
...................................................................................................................................................................................................TATATTTCTTTTTTTTTTTTGTT................................231.000.00--------1.00-------------------------------------------
................................................................................................................................................................................................TTTTATATTTCTTTTTTTTTTTAG..................................241.000.00----1.00-----------------------------------------------
................................................................................................................................................................................................TTTTATATTTCTTTTTTTTTTAG...................................231.000.00-1.00--------------------------------------------------
....................................................................................................................................................................................................ATATTTCTTTTTTTTTTTTCGAG...............................231.000.00----1.00-----------------------------------------------
...............GCATCTCTGGAGTTGATCG........................................................................................................................................................................................................................1911.001.00------1.00---------------------------------------------
...................................................................................................................................................................................................TATATTTCTTTTTTTTTTTTCGAG...............................241.000.00----1.00-----------------------------------------------
..................................................................................................................................................................................................TTATATTTCTTTTTTTTTTTTAACT...............................251.000.00-----1.00----------------------------------------------
................CATCTCTGGAGTTGATCGTT......................................................................................................................................................................................................................2011.001.00----------------------------1.00-----------------------
.........ATAGGCGCATCTCTGGAGTTG............................................................................................................................................................................................................................2111.001.00---------------1.00------------------------------------
.....................................................AGATGCCACTCTGATGCCAGCCTTTGCC.........................................................................................................................................................................281.000.00-----1.00----------------------------------------------
...............................................................................................................................................................................................CTTTTATATTTCTTTTTTTTTCCTG..................................251.000.00-1.00--------------------------------------------------
................................................................TGATGCCAGCCTTTTGCCAGGGTTGAG...............................................................................................................................................................2711.001.00-------------------1.00--------------------------------
..........TAGGCGCATCTCTGGAGT..............................................................................................................................................................................................................................1811.001.00---------1.00------------------------------------------
.......................................................................................................................................TATAACTAGCATTTTTAAA................................................................................................191.000.00-------------------------------------1.00--------------
...................................................................................................................................................................................................TATATTTCTTTTTTTTTTCCTG.................................221.000.00-1.00--------------------------------------------------
....................................................................................................................................................................................................ATATTTCTTTTTTTTTTGGC..................................201.000.00----1.00-----------------------------------------------
.......................................................................................................................................................................................................TTTCTTTTTTTTTTTTAGCGG..............................211.000.00----1.00-----------------------------------------------
...........AGGCGCATCTCTGGAGTC.............................................................................................................................................................................................................................181.000.00-----------------1.00----------------------------------
..............................................................................................................................................................................................TCTTTTATATTTCTTTTTTTTTTTTTTT................................281.000.00--1.00-------------------------------------------------
...............................................................................................................................................................................................CTTTTATATTTCTTTTTTTTTTATT..................................251.000.00-1.00--------------------------------------------------
........GATAGGCGCATCTCTGGAGTTGAT..........................................................................................................................................................................................................................2411.001.00----------------------------------------1.00-----------
...................................................................................................................................................................................................TATATTTCTTTTTTTTTTTTCAG................................231.000.00--1.00-------------------------------------------------
.......................................................................................................................................................................................TATTTAATCTTTTATATTTCTTTTTTTTTTTAG..................................331.000.00--1.00-------------------------------------------------
...............................................................................................................................................................................................CTTTTATATTTCTTTTTTTTG......................................211.000.00-1.00--------------------------------------------------
...............................................................................................................................................................................................CTTTTATATTTCTTTTTTTTTTTTTAG................................271.000.001.00---------------------------------------------------
.........ATAGGCGCATCTCTGGAGTTGA...........................................................................................................................................................................................................................2211.001.00---------1.00------------------------------------------
...............GCATCTCTGGAGTTGATC.........................................................................................................................................................................................................................1811.001.00---------------------------------------------1.00------
................................................................................................................................................................................................TTTTATATTTCTTTTTTTTATT....................................221.000.00-1.00--------------------------------------------------
...................................................................................................................................................................................................................TTTTAGTTTTTCTTCTCTTA...................201.000.00--------1.00-------------------------------------------
......GAGATAGGCGCATCTCTGGAGTT.............................................................................................................................................................................................................................2311.001.00----------1.00-----------------------------------------
.............GCGCATCTCTGGAGTTGATCGTT......................................................................................................................................................................................................................2311.001.00------------------------------------------1.00---------
..........TAGGCGCATCTCTGGAG...............................................................................................................................................................................................................................1711.001.00--------------1.00-------------------------------------
........GATAGGCGCATCTCTGGAG...............................................................................................................................................................................................................................1911.001.00-------1.00--------------------------------------------
...............................................................................................................................................................................................CTTTTATATTTCTTTTTTTTTTTTTTTG...............................281.000.00--1.00-------------------------------------------------
..................................................................................................................................................................................................TTATATTTCTTTTTTTTTTGGAG.................................231.000.00-----1.00----------------------------------------------
......................................................................................................................................................................................................ATTTCTTTTTTTTTTTTAGTTTTCTGG.........................271.000.00-----1.00----------------------------------------------
....................................................................................................................................................................................................ATATTTCTTTTTTTTTTTATCA................................221.000.001.00---------------------------------------------------
.......................GGAGTTGATCGTTACTATTA...............................................................................................................................................................................................................201.000.00------1.00---------------------------------------------
.....................................................................................................................................................................................................TATTTCTTTTTTTTTTTTAGG................................211.000.00---1.00------------------------------------------------
..............................................................................................................................................................................................TCTTTTATATTTCTTTTTTTTTTTG...................................2521.000.50-0.500.50-------------------------------------------------
...................................................................................................................................................................................................TATATTTCTTTTTTTTTTTTCTA................................231.000.00---1.00------------------------------------------------
..................................................................................................................................................................................................TTATATTTCTTTTTTTTTTCG...................................211.000.00--1.00-------------------------------------------------
...................................................................................................................................................................................................TATATTTCTTTTTTTTTTTGAC.................................221.000.00----1.00-----------------------------------------------
...................................................................................................................................................................................................TATATTTCTTTTTTTTTTTTCG.................................221.000.001.00---------------------------------------------------
.......................GGAGTTGATCGTTACTATGTGTC............................................................................................................................................................................................................2311.001.00-------1.00--------------------------------------------
.....................................................................................................................................................................................................TATTTCTTTTTTTTTTTTACTAG..............................231.000.00--1.00-------------------------------------------------
.....................................................................................................................................................................................................TATTTCTTTTTTTTTTTTAAGTG..............................231.000.00--------1.00-------------------------------------------
.............................................................................................................................................................................................ATCTTTTATATTTCTTTTTTTTAG.....................................241.000.001.00---------------------------------------------------
......................TGGAGTTGATCGTTACTTT.................................................................................................................................................................................................................191.000.00------1.00---------------------------------------------
...............................................................................................................................................................................................CTTTTATATTTCTTTTTTTTTAT....................................231.000.001.00---------------------------------------------------
...AAAGAGATAGGCGCATCTCT...................................................................................................................................................................................................................................2011.001.00---------1.00------------------------------------------
.................ATCTCTGGAGTTGATCGTT......................................................................................................................................................................................................................1911.001.00-------1.00--------------------------------------------
.........................AGTTGATCGTTACTATGTGTC............................................................................................................................................................................................................2111.001.00---------------1.00------------------------------------
...........................................................................................................................................................................CATCTTTTTACATATTTAATCTTTTATATT.................................................3011.001.00-1.00--------------------------------------------------
......................................................................CAGCCTTTTGCCAGGGTTGAGGT.............................................................................................................................................................2311.001.00---------------------1.00------------------------------
...............................................................................................................................................................................TTTTTACATATTTAATCTTTTATATTTCTTTTT..........................................3311.001.001.00---------------------------------------------------
........................................................................................................................................................................................................TTCTTTTTTTTTTTTAGTTTCTTT..........................241.000.00-----1.00----------------------------------------------
....................................................................................................................................................................AGGTTGGCATCTTTTTACATATTTAATCTT........................................................3011.001.00---1.00------------------------------------------------
.................................................................................................................................................................................................TTTATATTTCTTTTTTTTTTTTTCAG...............................261.000.00--1.00-------------------------------------------------
.......AGATAGGCGCATCTCTGGAGTTAAT..........................................................................................................................................................................................................................2511.002.00-------------------------------1.00--------------------
..................................................GTAAGATGCCACTCTGAAA.....................................................................................................................................................................................191.000.00----------------------------------------------1.00-----
.GGAAAGAGATAGGCGCA........................................................................................................................................................................................................................................1711.001.00----------------1.00-----------------------------------
..................................................................................................................................................................................................TTATATTTCTTTTTTTTTTTCTTA................................241.000.00--------------------------------1.00-------------------
...............................................................................................................................................................................................CTTTTATATTTCTTTTTTTTTTTTTTTT...............................281.000.00-1.00--------------------------------------------------
..........................................................................................................................................................................................TTAATCTTTTATATTTCCCAG...........................................211.000.001.00---------------------------------------------------
..........................................TGTCAAAGGTAAGATGCCAC............................................................................................................................................................................................2011.001.00--------------------------------------1.00-------------
..................................................................................................................................................................................................TTATATTTCTTTTTTTTTTTAACT................................241.000.00-----1.00----------------------------------------------
..............................................................................................................................................................................................TCTTTTATATTTCTTTTTTTTTTTTAGTC...............................291.000.00----1.00-----------------------------------------------
.........ATAGGCGCATCTCTG..................................................................................................................................................................................................................................1511.001.00--------------1.00-------------------------------------
.GGAAAGAGATAGGCGCATCTCT...................................................................................................................................................................................................................................2211.001.00-------------1.00--------------------------------------
........................................................................................................................................................................................................TTCTTTTTTTTTTTTAGTTTGTG...........................231.000.00-----1.00----------------------------------------------
..GAAAGAGATAGGCGCATC......................................................................................................................................................................................................................................1811.001.00--------------------------------------------------1.00-
....................TCTGGAGTTGATCGTTACT...................................................................................................................................................................................................................1911.001.00------------------1.00---------------------------------
....................................................................................................................................................................................................ATATTTCTTTTTTTTTTGGAG.................................211.000.00----1.00-----------------------------------------------
......................................................................................................................................................................................................ATTTCTTTTTTTTTTTTACAGC..............................221.000.00-----1.00----------------------------------------------
.....................................................................................................................................................................................................TATTTCTTTTTTTTTTTTATGG...............................221.000.00--1.00-------------------------------------------------
........GATAGGCGCATCTCTGGAGTTGATC.........................................................................................................................................................................................................................2511.001.00---------1.00------------------------------------------
......................................................................................................................................................................................ATATTTAATCTTTTATATTTCTTTTTTTTTTAG...................................331.000.00---1.00------------------------------------------------
................................................................................................................................................................................................TTTTATATTTCTTTTTTTTTTTTTC.................................2580.620.25-0.380.25-------------------------------------------------
..............................................................................................................................................................................................TCTTTTATATTTCTTTTTTTTTTTAG..................................2620.500.500.50---------------------------------------------------
...........AGGCGCATCTCTGGAG...............................................................................................................................................................................................................................1620.500.50--------------0.50-------------------------------------
..............................................................................................................................................................................................TCTTTTATATTTCTTTTTTTTTTT....................................2420.500.50--0.50-------------------------------------------------
................................................................................................................................................................................................TTTTATATTTCTTTTTTTTTTTTCT.................................2580.380.25-0.12--0.25-----------------------------------------------
................................................................................................................................................................................................TTTTATATTTCTTTTTTTTTTTTCTTA...............................2780.380.25-0.250.12-------------------------------------------------
................................................................................................................................................................................................TTTTATATTTCTTTTTTTTTTTTTTC................................2680.250.25-0.120.12-------------------------------------------------
................................................................................................................................................................................................TTTTATATTTCTTTTTTTTTTTTG..................................2480.250.25-0.120.12-------------------------------------------------
................................................................................................................................................................................................TTTTATATTTCTTTTTTTTTTTT...................................2380.250.25-0.120.12-------------------------------------------------
......................................................................................................................................................................................................ATTTCTTTTTTTTTTTTAGTT...............................2160.170.17----0.17-----------------------------------------------
..............................................................................................................................................................................................TCTTTTATATTTCTTTTTTT........................................2070.140.14-0.14--------------------------------------------------
...............................................................................................................GCCAAGGGTCATACA............................................................................................................................1580.120.12---------------0.12------------------------------------
................................................................................................................................................................................................TTTTATATTTCTTTTTTTTTTTTTTG................................2680.120.25-0.12--------------------------------------------------
................................................................................................................................................................................................TTTTATATTTCTTTTTTTTTTTTTCTT...............................2780.120.25--0.12-------------------------------------------------
................................................................................................................................................................................................TTTTATATTTCTTTTTTTTTTTTTTGC...............................2780.120.25--0.12-------------------------------------------------
................................................................................................................................................................................................TTTTATATTTCTTTTTTTTTTTTCC.................................2580.120.25--0.12-------------------------------------------------
................................................................................................................................................................................................TTTTATATTTCTTTTTTTTTTTTC..................................2480.120.25--0.12-------------------------------------------------
................................................................................................................................................................................................TTTTATATTTCTTTTTTTTTTTTTCTG...............................2780.120.25--0.12-------------------------------------------------
................................................................................................................................................................................................TTTTATATTTCTTTTTTTTTTTTTTTC...............................2780.120.25--0.12-------------------------------------------------
.........................................................................................................................................................................................................TCTTTTTTTTTTTTAGTTTTT............................2190.110.11--------0.11-------------------------------------------

Antisense strand
TGGAAAGAGATAGGCGCATCTCTGGAGTTGATCGTTACTATGTGTCAAAGGTAAGATGCCACTCTGATGCCAGCCTTTTGCCAGGGTTGAGGTGGGTTCTGGTAATGCCTTGCCAAGGGTCATACAGTGCTAATATATAACTAGCATTTTCTTATCTACTAGTGAGGTTGGCATCTTTTTACATATTTAATCTTTTATATTTCTTTTTTTTTTTTAGTTTTTCTTCTGTCATATATTTCTTATTCTGTGG
..................................................((((((.........((((((((((((..((.((((.(((((..((..(((((((....))))).))..))....(((((((.........))))))).))))).)).)).)))))))))))))).))))))....................................................................
..................................................51...................................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR189782SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553575(SRX182781)
source: Kidney. (Kidney)
GSM339995(GSM339995)
hues6NP. (cell line)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040009(GSM532894)
G727T. (cervix)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR189785SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR040039(GSM532924)
G531T. (cervix)
SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR343335SRR189786SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR029131(GSM416760)
MCF7. (cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
..............................................................................................................................................................................................TCTTTTATATTTCTTTTTTATAA..................................... 231.000.00-------------------------1.00--------------------------
....................................................................................GGTTGAGGTGGGTTCTTCC................................................................................................................................................... 191.000.00-----------------------------------------1.00----------
..........................................................................................................................................................................................................CTTTTTTTTTTTTAGTTTGCC........................... 211.000.00----------------1.00-----------------------------------
.............................................................................................................................................................................................................................TCTTCTGTCATATATTTCCA......... 201.000.00--------------------------1.00-------------------------
....................................................................CTGGCAAAAGGCTGGC...................................................................................................................................................................... 1660.170.17---------------------------------------------------0.17