ID: uc004esa.1_intron_2_0_chrX_118972491_r.5p
GENE: (7)
chrX:118974839-118975088-


(1)
B-CELL
(1)
BREAST
(8)
CELL-LINE
(1)
CERVIX
(2)
HEART
(1)
HELA
(2)
LIVER
(1)
OTHER
(6)
SKIN
(1)
TESTES

Sense strand
TAGACAGAATTCCAGAAAGGGACAAATTAAAGGATGAACCAAAGATTAAGGTATAAGAATGTTGAAACTGACTGCATGTTGCTAAAAATTGCACGTATCTACTTCTTTAAATATGCATGCGTCTTGTGTTGGTGTAAATGAATTTTTTGTTTTGTTTTTGTTCTCTTTTGGGGGGAAGTGATCCAATAAAAATCTTTCCTGTAATAGTATTAGTTTTTAAATTTAAGATCATTTAAAAGGATAAAGTAGT
..................................................................................(((((((...(((.......(((((((.....((((.......)))).....)))).))).....)))...)))))))..........................................................................................
.................................................................................82......................................................................................170..............................................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR037937(GSM510475)
293cand2. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR189786SRR553576(SRX182782)
source: Testis. (testes)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR189784SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR040020(GSM532905)
G699N_2. (cervix)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
......................................................................................AATTGCACGTATCTATCTG.................................................................................................................................................1957.000.0056.00-------1.00------------------
...............................................................................................................................................TTTTTGTTTTGTTTTTGTTCCGC....................................................................................236.000.00-3.003.00------------------------
................................................................................................................................................TTTTGTTTTGTTTTTGTTCTTTAG..................................................................................243.000.00--3.00------------------------
......................................................................................AATTGCACGTATCTATTTG.................................................................................................................................................193.000.003.00--------------------------
................................................AGGTATAAGAATGTTGAAACTGA...................................................................................................................................................................................2313.003.00---3.00-----------------------
................................................................................................................................................TTTTGTTTTGTTTTTGTTCCCA....................................................................................222.000.00-2.00-------------------------
..............................................................................................................................................TTTTTTGTTTTGTTTTTGTTCCGC....................................................................................2472.000.14-1.290.57--0.14---------------------
........................................AAAGATTAAGGTATAAGAATGTT...........................................................................................................................................................................................2312.002.00----2.00----------------------
..............................................................................................................................................TTTTTTGTTTTGTTTTTGTTCTTCTG..................................................................................262.000.00--2.00------------------------
...............................GGATGAACCAAAGATTAAG........................................................................................................................................................................................................1912.002.00-------2.00-------------------
................................................................................................................................................TTTTGTTTTGTTTTTGTTCCGC....................................................................................222.000.00-2.00-------------------------
................................................................................................................................................TTTTGTTTTGTTTTTGTTCTTGTG..................................................................................242.000.00-2.00-------------------------
......................................................................................AATTGCACGTATCTATCTT.................................................................................................................................................192.000.002.00--------------------------
..............................................................................................................................................TTTTTTGTTTTGTTTTTGTTCTGTT...................................................................................252.000.00-2.00-------------------------
......................................................................................AATTGCACGTATCTATCT..................................................................................................................................................182.000.002.00--------------------------
.............................................................................................................................................ATTTTTTGTTTTGTTTCGAG.........................................................................................201.000.00-1.00-------------------------
......................................................................................AATTGCACGTATCTAGCTG.................................................................................................................................................191.000.001.00--------------------------
...........................................................................................................................................................TTTTGTTCTCTTTTGGTCTG...........................................................................201.000.00-1.00-------------------------
..................................................................................................................................................TTGTTTTGTTTTTGTTCCGC....................................................................................201.000.00--1.00------------------------
........................................................................................................................GTCTTGTGTTGGTGTTTTG...............................................................................................................191.000.00----1.00----------------------
.............................................................................................................................................ATTTTTTGTTTTGTTTTTGTTTTAC....................................................................................251.000.00-1.00-------------------------
.........................ATTAAAGGATGAACCAAAGATTAAGGTATA...................................................................................................................................................................................................3011.001.00-------------------1.00-------
...............................................................................................................................................TTTTTGTTTTGTTTTTGTTCTCATT..................................................................................251.000.00--1.00------------------------
........................AATTAAAGGATGAACCAAAGATTAAG........................................................................................................................................................................................................2611.001.00------------------1.00--------
......................................................................................AATTGCACGTATCTAACTG.................................................................................................................................................191.000.001.00--------------------------
................................................................................................................................................TTTTGTTTTGTTTTTGTTCTTTGC..................................................................................241.000.00--1.00------------------------
.......................................................................................................................................................TTGTTTTTGTTCTCTTTTCC...............................................................................201.000.00-1.00-------------------------
............................................................................................................................................AATTTTTTGTTTTGTTTTTGTTCTC.....................................................................................2511.001.00-----1.00---------------------
..............................................................................................................................................TTTTTTGTTTTGTTTTTGTTCTCGTC..................................................................................261.000.00-1.00-------------------------
......................................................................................................................................................TTTGTTTTTGTTCTCTTTCT................................................................................201.000.00-1.00-------------------------
...............................................................................................................................................TTTTTGTTTTGTTTTTGTTCTCTGCA.................................................................................261.000.00--1.00------------------------
..........................TTAAAGGATGAACCAAAGATTAAG........................................................................................................................................................................................................2411.001.00---------------1.00-----------
......................................................................................AATTGCACGTATCTATATG.................................................................................................................................................191.000.001.00--------------------------
................................................................................................................................................TTTTGTTTTGTTTTTGTTCTTGAG..................................................................................241.000.00--1.00------------------------
................................................................................................................................................TTTTGTTTTGTTTTTGTTCTCTTTTGAGG.............................................................................291.000.00-1.00-------------------------
.................................................................................................................................................TTTGTTTTGTTTTTGTTCCGGG...................................................................................221.000.00-----1.00---------------------
..............................................................................................................................................TTTTTTGTTTTGTTTTTGTTCTTTT...................................................................................251.000.00---------------------1.00-----
..........................TTAAAGGATGAACCAAAGATTAAGCTGC....................................................................................................................................................................................................2811.001.00------1.00--------------------
...................................................................................................................................................TGTTTTGTTTTTGTTCCGC....................................................................................191.000.00-1.00-------------------------
..............................................TAAGGTATAAGAATGTATCG........................................................................................................................................................................................201.000.001.00--------------------------
.............................................................................................................................................ATTTTTTGTTTTGTTTTTGTTGCC.....................................................................................241.000.00--1.00------------------------
......................................................................................AATTGCACGTATCTATG...................................................................................................................................................171.000.001.00--------------------------
..........................................................ATGTTGAAACTGACTCTTT.............................................................................................................................................................................191.000.00--------------1.00------------
.................AGGGACAAATTAAAGGATG......................................................................................................................................................................................................................1911.001.00-------------1.00-------------
.............................................................................................................................................ATTTTTTGTTTTGTTTTTGTTCGG.....................................................................................241.000.00-1.00-------------------------
..............................................TAAGGTATAAGAATGTTGAAAC......................................................................................................................................................................................2211.001.00---------1.00-----------------
..............................................................................................................................................TTTTTTGTTTTGTTTTTGTTCTGT....................................................................................241.000.00-1.00-------------------------
......................................................................................AATTGCACGTATCTATCCA.................................................................................................................................................191.000.001.00--------------------------
............CAGAAAGGGACAAATTAAAGG.........................................................................................................................................................................................................................2111.001.00----------------1.00----------
......................................................................................AATTGCACGTATCTATGTG.................................................................................................................................................191.000.001.00--------------------------
...............................................................................................TATCTACTTCTTTAACCTT........................................................................................................................................191.000.00--------------------1.00------
..................GGGACAAATTAAAGGATGAACC..................................................................................................................................................................................................................2211.001.00-----------1.00---------------
...........................TAAAGGATGAACCAAAGATTAAGC.......................................................................................................................................................................................................241.000.00------1.00--------------------
......................................................................................AATTGCACGTATCTATCGA.................................................................................................................................................191.000.001.00--------------------------
................................................................................................................................................TTTTGTTTTGTTTTTGTTCCGCA...................................................................................231.000.00-1.00-------------------------
..............................AGGATGAACCAAAGATTAAGGT......................................................................................................................................................................................................2211.001.00------------1.00--------------
......................................................................................AATTGCACGTATCTATCTA.................................................................................................................................................191.000.001.00--------------------------
................................................................................................................................................TTTTGTTTTGTTTTTGTTCTCTTTT.................................................................................2521.001.00--1.00------------------------
............................................................................................................................................AATTTTTTGTTTTGTTTTTGTTCTCTTTCGG...............................................................................311.000.00--1.00------------------------
..........................................................................................................................................................................GGGGGAAGTGATCCAAAT..............................................................181.000.00---1.00-----------------------
................................................................................................................................................TTTTGTTTTGTTTTTGTTCTTTTA..................................................................................241.000.00--1.00------------------------
................................................................................................................................................TTTTGTTTTGTTTTTGTTCTGGC...................................................................................231.000.00-1.00-------------------------
...........CCAGAAAGGGACAAATTAAAGGA........................................................................................................................................................................................................................2311.001.00-----------------1.00---------
..............................................................................................................................................TTTTTTGTTTTGTTTTTGTTCTTTC...................................................................................251.000.00-1.00-------------------------
......................................................................................AATTGCACGTATCTATCCG.................................................................................................................................................191.000.001.00--------------------------
..............................AGGATGAACCAAAGATTAAGGTACACA.................................................................................................................................................................................................271.000.00----------1.00----------------
................................................................................................................................TTGGTGTAAATGAATTTT........................................................................................................1820.500.50-------------------------0.50-
..........................................................................................................................CTTGTGTTGGTGTAAAT...............................................................................................................1720.500.50----------------------0.50----
...............AAAGGGACAAATTAAAGGA........................................................................................................................................................................................................................1920.500.50-----------------------0.50---
.................................ATGAACCAAAGATTAAG........................................................................................................................................................................................................1720.500.50------------------------0.50--
..................................TGAACCAAAGATTAAG........................................................................................................................................................................................................1630.330.33--------------------------0.33
..............................................................................................................................................TTTTTTGTTTTGTTTTTGTTCGTCC...................................................................................2570.140.14--0.14------------------------
..............................................................................................................................................TTTTTTGTTTTGTTTTTGTTC.......................................................................................2170.140.14-0.14-------------------------
..............................................................................................................................................TTTTTTGTTTTGTTTTTGTTCCA.....................................................................................2370.140.14--0.14------------------------

Antisense strand
TAGACAGAATTCCAGAAAGGGACAAATTAAAGGATGAACCAAAGATTAAGGTATAAGAATGTTGAAACTGACTGCATGTTGCTAAAAATTGCACGTATCTACTTCTTTAAATATGCATGCGTCTTGTGTTGGTGTAAATGAATTTTTTGTTTTGTTTTTGTTCTCTTTTGGGGGGAAGTGATCCAATAAAAATCTTTCCTGTAATAGTATTAGTTTTTAAATTTAAGATCATTTAAAAGGATAAAGTAGT
..................................................................................(((((((...(((.......(((((((.....((((.......)))).....)))).))).....)))...)))))))..........................................................................................
.................................................................................82......................................................................................170..............................................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR037937(GSM510475)
293cand2. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR189786SRR553576(SRX182782)
source: Testis. (testes)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR189784SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR040020(GSM532905)
G699N_2. (cervix)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)