| (1) B-CELL | (1) BREAST | (8) CELL-LINE | (15) CERVIX | (2) HEART | (2) HELA | (2) OTHER | (2) SKIN | (1) UTERUS |
| GCTTGTTCTTACTGGCCCTGAGTCTTTGGGGGCAGCCTGCAGAGGCTGCGGTAAGTCCTTCCTCCCCTCCCCCGCGCCCATCACCGCTCTTTCACGCTGAAATTACCTTTTTTTTGGGGGGGGGGTCCCTTTATCTTCCTTTTGGCGTTGACTAGGGAATTCAAATTTGCTTTCTCATGTTTAGGAAGAAACGTTATTTGCAACACCGGTAACTCAAGCCTTCTGAAGTCCAACGGAGAGGTTTAAGTGC ...............................................................(((((((((((((........)))..((((.....)))).............))))))))))............................................................................................................................. ..................................................51.........................................................................126.......................................................................................................................... | Size | Perfect hit | Total Norm | Perfect Norm | DRR001489(DRX001043) "Hela short nuclear cell fraction, control". (hela) | SRR037939(GSM510477) 293cand5_rep1. (cell line) | SRR040006(GSM532891) G601N. (cervix) | SRR037940(GSM510478) 293cand5_rep2. (cell line) | SRR040032(GSM532917) G603N. (cervix) | SRR015360(GSM380325) Plasma B cells (PC137). (B cell) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189784 | SRR040026(GSM532911) G220N. (cervix) | SRR040010(GSM532895) G529N. (cervix) | SRR040029(GSM532914) G026T. (cervix) | SRR343336 | SRR343337 | SRR040042(GSM532927) G428N. (cervix) | SRR040034(GSM532919) G001N. (cervix) | SRR040030(GSM532915) G013N. (cervix) | GSM532876(GSM532876) G547T. (cervix) | SRR553572(SRX182778) source: Frontal Cortex. (Frontal Cortex) | SRR094130(GSM651906) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR040028(GSM532913) G026N. (cervix) | SRR040011(GSM532896) G529T. (cervix) | SRR040016(GSM532901) G645N. (cervix) | DRR000556(DRX000314) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | DRR001484(DRX001038) "Hela long nuclear cell fraction, control". (hela) | SRR342901(SRX096797) small RNA seq of Left atrial tissue. (heart) | DRR000558(DRX000316) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | SRR040036(GSM532921) G243N. (cervix) | SRR189785 | SRR040031(GSM532916) G013T. (cervix) | SRR330861(SRX091699) tissue: skin psoriatic involveddisease state:. (skin) | SRR342900(SRX096796) small RNA seq of Right atrial tissue. (heart) | SRR330902(SRX091740) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR029132(GSM416761) MB-MDA231. (cell line) | SRR107296(GSM677703) 18-30nt fraction of small RNA. (cell line) | TAX577738(Rovira) total RNA. (breast) | SRR326281(GSM769511) "Dicer mRNA was knocked down using siDicer, c. (cell line) | SRR040015(GSM532900) G623T. (cervix) | SRR553573(SRX182779) source: Cerebellum. (Cerebellum) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .....................................................AGTCCTTCCTCCCCTGCCA.................................................................................................................................................................................. | 19 | 33.00 | 0.00 | - | - | 3.00 | - | 3.00 | 3.00 | - | 2.00 | 2.00 | 2.00 | 2.00 | 2.00 | 2.00 | 1.00 | 1.00 | 1.00 | 1.00 | - | - | 1.00 | 1.00 | 1.00 | - | - | - | - | 1.00 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | |
| .......................................................................................................................................................................TGCTTTCTCATGTTTAGGAAGAAACG......................................................... | 26 | 1 | 11.00 | 11.00 | - | 7.00 | - | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................CTTTTTTTTGGGGGGGCCG............................................................................................................................. | 19 | 3.00 | 0.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................CCTTTTTTTTGGGGGGGCG.............................................................................................................................. | 19 | 3.00 | 0.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................CCTTTTTTTTGGGGGTCCC.............................................................................................................................. | 19 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................CCTTTTTTTTGGGGGGTCG.............................................................................................................................. | 19 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................CTTTTTTTTGGGGGGGGCCG............................................................................................................................ | 20 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................................................................................................GCAACACCGGTAACTCAAGCCTTCTGAAGTCC................... | 32 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................TTTTTGGGGGGGGGGTCCC......................................................................................................................... | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................CTTTGGGGGCAGCCTGCAGAGG............................................................................................................................................................................................................. | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................AGTCCTTCCTCCCCTGCCG.................................................................................................................................................................................. | 19 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................................................................................................................................TTCTGAAGTCCAACGAT............. | 17 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................TTGGGGGCAGCCTGCAGAGGCT........................................................................................................................................................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ..........................................................................................................CTTTTTTTTGGGGGGGGCGGA........................................................................................................................... | 21 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................................................................................................................................TTCTGAAGTCCAACGA.............. | 16 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | |
| ..............................................................................................................................................................................................................CGGTAACTCAAGCCTTCTGAAGTCC................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................TGGGGGGGGGGTCCCTGG...................................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | |
| .........................................................................................................CCTTTTTTTTGGGGGGAAGA............................................................................................................................. | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................GCGTTGACTAGGGAATTCTG...................................................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | |
| .........................................................................................................CCTTTTTTTTGGGGGTCCG.............................................................................................................................. | 19 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................CCTTTTTTTTGGGGGTGCG.............................................................................................................................. | 19 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................................................................................................................AAGTCCAACGGAGAGGTTTAAGCGC | 25 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............GGCCCTGAGTCTTTGGGG........................................................................................................................................................................................................................... | 18 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 |
| ...............CCCTGAGTCTTTGGGG........................................................................................................................................................................................................................... | 16 | 5 | 0.20 | 0.20 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.20 |
| ......................................................................................................TTACCTTTTTTTTGGG.................................................................................................................................... | 16 | 7 | 0.14 | 0.14 | - | - | - | - | - | - | 0.14 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................AATTACCTTTTTTTTGG..................................................................................................................................... | 17 | 9 | 0.11 | 0.11 | - | - | - | - | - | - | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| GCTTGTTCTTACTGGCCCTGAGTCTTTGGGGGCAGCCTGCAGAGGCTGCGGTAAGTCCTTCCTCCCCTCCCCCGCGCCCATCACCGCTCTTTCACGCTGAAATTACCTTTTTTTTGGGGGGGGGGTCCCTTTATCTTCCTTTTGGCGTTGACTAGGGAATTCAAATTTGCTTTCTCATGTTTAGGAAGAAACGTTATTTGCAACACCGGTAACTCAAGCCTTCTGAAGTCCAACGGAGAGGTTTAAGTGC ...............................................................(((((((((((((........)))..((((.....)))).............))))))))))............................................................................................................................. ..................................................51.........................................................................126.......................................................................................................................... | Size | Perfect hit | Total Norm | Perfect Norm | DRR001489(DRX001043) "Hela short nuclear cell fraction, control". (hela) | SRR037939(GSM510477) 293cand5_rep1. (cell line) | SRR040006(GSM532891) G601N. (cervix) | SRR037940(GSM510478) 293cand5_rep2. (cell line) | SRR040032(GSM532917) G603N. (cervix) | SRR015360(GSM380325) Plasma B cells (PC137). (B cell) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189784 | SRR040026(GSM532911) G220N. (cervix) | SRR040010(GSM532895) G529N. (cervix) | SRR040029(GSM532914) G026T. (cervix) | SRR343336 | SRR343337 | SRR040042(GSM532927) G428N. (cervix) | SRR040034(GSM532919) G001N. (cervix) | SRR040030(GSM532915) G013N. (cervix) | GSM532876(GSM532876) G547T. (cervix) | SRR553572(SRX182778) source: Frontal Cortex. (Frontal Cortex) | SRR094130(GSM651906) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR040028(GSM532913) G026N. (cervix) | SRR040011(GSM532896) G529T. (cervix) | SRR040016(GSM532901) G645N. (cervix) | DRR000556(DRX000314) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | DRR001484(DRX001038) "Hela long nuclear cell fraction, control". (hela) | SRR342901(SRX096797) small RNA seq of Left atrial tissue. (heart) | DRR000558(DRX000316) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | SRR040036(GSM532921) G243N. (cervix) | SRR189785 | SRR040031(GSM532916) G013T. (cervix) | SRR330861(SRX091699) tissue: skin psoriatic involveddisease state:. (skin) | SRR342900(SRX096796) small RNA seq of Right atrial tissue. (heart) | SRR330902(SRX091740) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR029132(GSM416761) MB-MDA231. (cell line) | SRR107296(GSM677703) 18-30nt fraction of small RNA. (cell line) | TAX577738(Rovira) total RNA. (breast) | SRR326281(GSM769511) "Dicer mRNA was knocked down using siDicer, c. (cell line) | SRR040015(GSM532900) G623T. (cervix) | SRR553573(SRX182779) source: Cerebellum. (Cerebellum) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .CTTGTTCTTACTGGCGC........................................................................................................................................................................................................................................ | 17 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | |
| ..............................................................................................................................................................................................................................AACCTCTCCGTTGGACTTCAG....... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................CCCTCCCCCGCGCCCCGGG....................................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |